RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 V9GYS6 101 aa0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 NKTRP30414 1462 aaKnown RBP0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 TSC2P49815 1807 aa0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 HECTD4Q9Y4D8 3996 aa0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 REV3LO60673 3130 aa0□□□□□ -2.41
HMGB1P33-201ENST00000563485 HSPG2P98160 4391 aa0□□□□□ -2.41
HMGB1P33-201ENST00000563485 LRP2P98164 4655 aa0□□□□□ -2.41
HMGB1P33-201ENST00000563485 PVALEFA0A1B0GWK0 134 aa0□□□□□ -2.41
HMGB1P33-201ENST00000563485 APC2O95996 2303 aa0□□□□□ -2.41
HMGB1P33-201ENST00000563485 FAUP35544 74 aaKnown RBP0□□□□□ -2.41
HMGB1P33-201ENST00000563485 ETDBQ3ZM63 59 aa0□□□□□ -2.41
HMGB1P33-201ENST00000563485 KNDC1Q76NI1 1749 aa0□□□□□ -2.41
HMGB1P33-201ENST00000563485 SETXQ7Z333 2677 aaKnown RBP0□□□□□ -2.41
HMGB1P33-201ENST00000563485 HIGD1BQ9P298 99 aa0□□□□□ -2.41
HMGB1P33-201ENST00000563485 UBE2D4Q9Y2X8 147 aa0□□□□□ -2.41
HMGB1P33-201ENST00000563485 ANKRD36A6QL64 1941 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 MYH4Q9Y623 1939 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 CRYBG1Q9Y4K1 1723 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 C5P01031 1676 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 MYO3AQ8NEV4 1616 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 ALKQ9UM73 1620 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 LRRC9Q6ZRR7 1453 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 PLIN4Q96Q06 1357 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 F8WEM9 126 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 SMIM11AP58511 58 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 DEFB107AQ8IZN7 70 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 C20orf78Q9BR46 151 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 PSENENQ9NZ42 101 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 MON2Q7Z3U7 1717 aa-0.01□□□□□ -2.41
HMGB1P33-201ENST00000563485 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 D6R8Y8 96 aa-0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 PRM1P04553 51 aa-0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 HMGN2P05204 90 aaKnown RBP-0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 IGLC3P0DOY3 106 aa-0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 GNGT1P63211 74 aa-0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 MUSTN1Q8IVN3 82 aa-0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 CRIPTQ9P021 101 aa-0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 RABAC1Q9UI14 185 aa-0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 TENM2Q9NT68 2774 aa-0.02□□□□□ -2.41
HMGB1P33-201ENST00000563485 ATP7BP35670 1465 aa-0.03□□□□□ -2.41
HMGB1P33-201ENST00000563485 LEPROTL1O95214 131 aa-0.03□□□□□ -2.41
HMGB1P33-201ENST00000563485 NMSQ5H8A3 153 aa-0.03□□□□□ -2.41
HMGB1P33-201ENST00000563485 CNOT1A5YKK6 2376 aaKnown RBP-0.03□□□□□ -2.41
HMGB1P33-201ENST00000563485 CLIP1P30622 1438 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 COL6A3P12111 3177 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 FMN2Q9NZ56 1722 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 CPSF4LA6NMK7 179 aaKnown RBP-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 I3L3M4 83 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 K7EP34 96 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 CCL22O00626 93 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 IGLC2P0DOY2 106 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 SPRR2BP35325 72 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 PEA15Q15121 130 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 DEFB105AQ8NG35 78 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 NEXMIFQ5QGS0 1516 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 MAGI2Q86UL8 1455 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 QSER1Q2KHR3 1735 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 UBR1Q8IWV7 1749 aa-0.04□□□□□ -2.42
HMGB1P33-201ENST00000563485 ACANP16112 2415 aa-0.05□□□□□ -2.42
HMGB1P33-201ENST00000563485 RB1CC1Q8TDY2 1594 aa-0.05□□□□□ -2.42
HMGB1P33-201ENST00000563485 ZANQ9Y493 2812 aa-0.05□□□□□ -2.42
HMGB1P33-201ENST00000563485 SNRPFP62306 86 aaKnown RBP-0.05□□□□□ -2.42
HMGB1P33-201ENST00000563485 COX6B2Q6YFQ2 88 aa-0.05□□□□□ -2.42
HMGB1P33-201ENST00000563485 MRPL34Q9BQ48 92 aaKnown RBP-0.05□□□□□ -2.42
HMGB1P33-201ENST00000563485 SPRR2GQ9BYE4 73 aa-0.05□□□□□ -2.42
HMGB1P33-201ENST00000563485 Q9H521 79 aa-0.05□□□□□ -2.42
HMGB1P33-201ENST00000563485 PPLO60437 1756 aa-0.05□□□□□ -2.42
HMGB1P33-201ENST00000563485 RGPD4Q7Z3J3 1758 aa-0.05□□□□□ -2.42
HMGB1P33-201ENST00000563485 FLNBO75369 2602 aaKnown RBP-0.05□□□□□ -2.42
HMGB1P33-201ENST00000563485 KIF20BQ96Q89 1820 aa-0.06□□□□□ -2.42
HMGB1P33-201ENST00000563485 PKHD1P08F94 4074 aa-0.06□□□□□ -2.42
HMGB1P33-201ENST00000563485 PKD1L3Q7Z443 1732 aa-0.06□□□□□ -2.42
HMGB1P33-201ENST00000563485 GNG2P59768 71 aa-0.06□□□□□ -2.42
HMGB1P33-201ENST00000563485 PLGLAQ15195 96 aa-0.06□□□□□ -2.42
HMGB1P33-201ENST00000563485 C9orf62Q8N4C0 152 aa-0.06□□□□□ -2.42
HMGB1P33-201ENST00000563485 MED14O60244 1454 aa-0.06□□□□□ -2.42
HMGB1P33-201ENST00000563485 MAP3K4Q9Y6R4 1608 aa-0.06□□□□□ -2.42
HMGB1P33-201ENST00000563485 STAB1Q9NY15 2570 aa-0.06□□□□□ -2.42
HMGB1P33-201ENST00000563485 SMARCA2P51531 1590 aa-0.06□□□□□ -2.42
HMGB1P33-201ENST00000563485 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 LRP1BQ9NZR2 4599 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 TRANK1O15050 2925 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 SPTY2D1-AS1A0A0U1RR47 76 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 MYMXA0A1B0GTQ4 84 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 A0A1B0GUT8 65 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 ACYP1P07311 99 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 LINC00643Q86TS7 51 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 S100A16Q96FQ6 103 aaKnown RBP-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 PKD1P98161 4303 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 KNL1Q8NG31 2342 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 UACAQ9BZF9 1416 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 RGPD3A6NKT7 1758 aaPredicted RBP-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 RGPD8O14715 1765 aaPredicted RBP-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 RGPD5Q99666 1765 aa-0.07□□□□□ -2.42
HMGB1P33-201ENST00000563485 TMEM131LA2VDJ0 1609 aa-0.08□□□□□ -2.42
HMGB1P33-201ENST00000563485 IQCF6A8MYZ5 107 aa-0.08□□□□□ -2.42
HMGB1P33-201ENST00000563485 M0R2T5 61 aa-0.08□□□□□ -2.42
HMGB1P33-201ENST00000563485 COX7BP24311 80 aa-0.08□□□□□ -2.42
HMGB1P33-201ENST00000563485 DEFB112Q30KQ8 113 aa-0.08□□□□□ -2.42
HMGB1P33-201ENST00000563485 H1FX-AS1Q4G0G2 97 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms