RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 CUL7Q14999 1698 aa-1.08□□□□□ -2.58
DENND4A-205ENST00000562540 MARF1Q9Y4F3 1742 aaKnown RBP-1.09□□□□□ -2.58
DENND4A-205ENST00000562540 A0A087WVE0 104 aa-1.09□□□□□ -2.58
DENND4A-205ENST00000562540 C7orf77A4D0Y5 90 aa-1.09□□□□□ -2.58
DENND4A-205ENST00000562540 H3BQ15 152 aa-1.09□□□□□ -2.58
DENND4A-205ENST00000562540 SNCAP37840 140 aa-1.09□□□□□ -2.58
DENND4A-205ENST00000562540 DEFB112Q30KQ8 113 aa-1.09□□□□□ -2.58
DENND4A-205ENST00000562540 C6orf201Q7Z4U5 140 aa-1.09□□□□□ -2.58
DENND4A-205ENST00000562540 CGREF1Q99674 301 aa-1.09□□□□□ -2.58
DENND4A-205ENST00000562540 DIP2CQ9Y2E4 1556 aa-1.09□□□□□ -2.58
DENND4A-205ENST00000562540 NALCNQ8IZF0 1738 aa-1.09□□□□□ -2.58
DENND4A-205ENST00000562540 HTTP42858 3142 aa-1.1□□□□□ -2.59
DENND4A-205ENST00000562540 NKTRP30414 1462 aaKnown RBP-1.1□□□□□ -2.59
DENND4A-205ENST00000562540 MRC2Q9UBG0 1479 aa-1.1□□□□□ -2.59
DENND4A-205ENST00000562540 CORTO00230 105 aa-1.1□□□□□ -2.59
DENND4A-205ENST00000562540 SPRR2FQ96RM1 72 aa-1.1□□□□□ -2.59
DENND4A-205ENST00000562540 TMEM262E9PQX1 116 aa-1.11□□□□□ -2.59
DENND4A-205ENST00000562540 H3BQF6 201 aa-1.11□□□□□ -2.59
DENND4A-205ENST00000562540 DLEU1O43261 78 aa-1.11□□□□□ -2.59
DENND4A-205ENST00000562540 TOP2BQ02880 1626 aa-1.11□□□□□ -2.59
DENND4A-205ENST00000562540 PKD1P98161 4303 aa-1.12□□□□□ -2.59
DENND4A-205ENST00000562540 S100A1P23297 94 aa-1.12□□□□□ -2.59
DENND4A-205ENST00000562540 MGAM2Q2M2H8 2515 aa-1.13□□□□□ -2.59
DENND4A-205ENST00000562540 A0A0G2JND7 137 aa-1.13□□□□□ -2.59
DENND4A-205ENST00000562540 A0A1B0GV90 55 aa-1.13□□□□□ -2.59
DENND4A-205ENST00000562540 GNGT1P63211 74 aa-1.13□□□□□ -2.59
DENND4A-205ENST00000562540 HSD52Q0P140 79 aa-1.13□□□□□ -2.59
DENND4A-205ENST00000562540 DEFB107AQ8IZN7 70 aa-1.13□□□□□ -2.59
DENND4A-205ENST00000562540 TRANK1O15050 2925 aa-1.13□□□□□ -2.59
DENND4A-205ENST00000562540 EFCAB10A6NFE3 127 aa-1.14□□□□□ -2.59
DENND4A-205ENST00000562540 ARMS2P0C7Q2 107 aa-1.14□□□□□ -2.59
DENND4A-205ENST00000562540 HEPN1Q6WQI6 88 aa-1.14□□□□□ -2.59
DENND4A-205ENST00000562540 MRPL34Q9BQ48 92 aaKnown RBP-1.14□□□□□ -2.59
DENND4A-205ENST00000562540 ACACAQ13085 2346 aa-1.14□□□□□ -2.59
DENND4A-205ENST00000562540 PLECQ15149 4684 aaKnown RBP-1.14□□□□□ -2.59
DENND4A-205ENST00000562540 VPS13DQ5THJ4 4388 aa-1.15□□□□□ -2.59
DENND4A-205ENST00000562540 ARHGAP5Q13017 1502 aa-1.15□□□□□ -2.59
DENND4A-205ENST00000562540 TRAV30A0A087WSZ9 112 aa-1.15□□□□□ -2.59
DENND4A-205ENST00000562540 hADV29S1A0JD25 119 aa-1.15□□□□□ -2.59
DENND4A-205ENST00000562540 H0Y9P7 68 aa-1.15□□□□□ -2.59
DENND4A-205ENST00000562540 CCL22O00626 93 aa-1.15□□□□□ -2.59
DENND4A-205ENST00000562540 EDC4Q6P2E9 1401 aaKnown RBP-1.15□□□□□ -2.59
DENND4A-205ENST00000562540 KRTAP19-6Q3LI70 58 aa-1.16□□□□□ -2.6
DENND4A-205ENST00000562540 GNG8Q9UK08 70 aa-1.16□□□□□ -2.6
DENND4A-205ENST00000562540 MAPKBP1O60336 1514 aa-1.16□□□□□ -2.6
DENND4A-205ENST00000562540 CCDC168Q8NDH2 2452 aa-1.16□□□□□ -2.6
DENND4A-205ENST00000562540 LRRK2Q5S007 2527 aa-1.17□□□□□ -2.6
DENND4A-205ENST00000562540 KNDC1Q76NI1 1749 aa-1.17□□□□□ -2.6
DENND4A-205ENST00000562540 PKD1L2Q7Z442 2459 aa-1.17□□□□□ -2.6
DENND4A-205ENST00000562540 H0YGG7 62 aa-1.17□□□□□ -2.6
DENND4A-205ENST00000562540 MT1AP04731 61 aa-1.17□□□□□ -2.6
DENND4A-205ENST00000562540 GTF2H5Q6ZYL4 71 aa-1.17□□□□□ -2.6
DENND4A-205ENST00000562540 CACFD1Q9UGQ2 172 aa-1.17□□□□□ -2.6
DENND4A-205ENST00000562540 CDKN2A-AS1Q9UH64 79 aa-1.17□□□□□ -2.6
DENND4A-205ENST00000562540 NRKQ7Z2Y5 1582 aa-1.17□□□□□ -2.6
DENND4A-205ENST00000562540 COL4A6Q14031 1691 aa-1.18□□□□□ -2.6
DENND4A-205ENST00000562540 MRPS10P82664 201 aaKnown RBP-1.18□□□□□ -2.6
DENND4A-205ENST00000562540 PMCHL1Q16048 86 aa-1.18□□□□□ -2.6
DENND4A-205ENST00000562540 PSMG4Q5JS54 123 aa-1.18□□□□□ -2.6
DENND4A-205ENST00000562540 ITPR1Q14643 2758 aa-1.18□□□□□ -2.6
DENND4A-205ENST00000562540 COL14A1Q05707 1796 aaKnown RBP-1.19□□□□□ -2.6
DENND4A-205ENST00000562540 LRRC37AA6NMS7 1700 aa-1.19□□□□□ -2.6
DENND4A-205ENST00000562540 ASIPP42127 132 aa-1.19□□□□□ -2.6
DENND4A-205ENST00000562540 LAMA3Q16787 3333 aa-1.19□□□□□ -2.6
DENND4A-205ENST00000562540 ZZEF1O43149 2961 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 MTORP42345 2549 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 ANK3Q12955 4377 aaKnown RBP-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 AKAP9Q99996 3911 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 TRBV25-1A0A075B6N4 114 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 SPTY2D1-AS1A0A0U1RR47 76 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 NDUFC1O43677 76 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 WFDC13Q8IUB5 93 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 TMEM203Q969S6 136 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 LYSTQ99698 3801 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 HIGD1BQ9P298 99 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 SLIT1O75093 1534 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 SPHKAPQ2M3C7 1700 aa-1.2□□□□□ -2.6
DENND4A-205ENST00000562540 CLIP1P30622 1438 aa-1.21□□□□□ -2.6
DENND4A-205ENST00000562540 DNAH9Q9NYC9 4486 aa-1.21□□□□□ -2.6
DENND4A-205ENST00000562540 TRBV7-7A0A0K0K1E9 115 aa-1.21□□□□□ -2.6
DENND4A-205ENST00000562540 DEFA5Q01523 94 aa-1.21□□□□□ -2.6
DENND4A-205ENST00000562540 LELP1Q5T871 98 aa-1.21□□□□□ -2.6
DENND4A-205ENST00000562540 PZPP20742 1482 aa-1.21□□□□□ -2.6
DENND4A-205ENST00000562540 GCN1Q92616 2671 aaKnown RBP-1.21□□□□□ -2.6
DENND4A-205ENST00000562540 KIAA1551Q9HCM1 1747 aa-1.21□□□□□ -2.6
DENND4A-205ENST00000562540 CEP295Q9C0D2 2601 aa-1.21□□□□□ -2.6
DENND4A-205ENST00000562540 KIF20BQ96Q89 1820 aa-1.22□□□□□ -2.6
DENND4A-205ENST00000562540 ITPR2Q14571 2701 aa-1.22□□□□□ -2.6
DENND4A-205ENST00000562540 UTP20O75691 2785 aaKnown RBP-1.22□□□□□ -2.6
DENND4A-205ENST00000562540 CUBNO60494 3623 aa-1.22□□□□□ -2.61
DENND4A-205ENST00000562540 CHD1O14646 1710 aa-1.23□□□□□ -2.61
DENND4A-205ENST00000562540 GNGT2O14610 69 aa-1.23□□□□□ -2.61
DENND4A-205ENST00000562540 TRGV9Q99603 122 aa-1.23□□□□□ -2.61
DENND4A-205ENST00000562540 C2orf88Q9BSF0 95 aa-1.23□□□□□ -2.61
DENND4A-205ENST00000562540 TARBP1Q13395 1621 aaKnown RBP-1.23□□□□□ -2.61
DENND4A-205ENST00000562540 NBEAQ8NFP9 2946 aa-1.24□□□□□ -2.61
DENND4A-205ENST00000562540 CC2D2AQ9P2K1 1620 aa-1.24□□□□□ -2.61
DENND4A-205ENST00000562540 MT1HP80294 61 aa-1.24□□□□□ -2.61
DENND4A-205ENST00000562540 MYO15AQ9UKN7 3530 aa-1.24□□□□□ -2.61
DENND4A-205ENST00000562540 BPTFQ12830 3046 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms