RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 LYSTQ99698 3801 aa7.97□□□□□ -1.13
PCAT1-202ENST00000561978 LINC00158P58513 81 aa7.97□□□□□ -1.13
PCAT1-202ENST00000561978 LELP1Q5T871 98 aa7.97□□□□□ -1.13
PCAT1-202ENST00000561978 CD164L2Q6UWJ8 174 aa7.97□□□□□ -1.13
PCAT1-202ENST00000561978 SOSTDC1Q6X4U4 206 aa7.97□□□□□ -1.13
PCAT1-202ENST00000561978 Q8IZM0 81 aa7.97□□□□□ -1.13
PCAT1-202ENST00000561978 LINC01600Q96MT4 127 aa7.97□□□□□ -1.13
PCAT1-202ENST00000561978 TRAV13-2A0A0B4J235 113 aa7.96□□□□□ -1.14
PCAT1-202ENST00000561978 UQCRQO14949 82 aa7.96□□□□□ -1.14
PCAT1-202ENST00000561978 LINC00269Q8N2A0 174 aa7.96□□□□□ -1.14
PCAT1-202ENST00000561978 LINC00526Q96FQ7 95 aa7.96□□□□□ -1.14
PCAT1-202ENST00000561978 TRBV10-2A0A0K0K1G8 114 aa7.95□□□□□ -1.14
PCAT1-202ENST00000561978 FAM236AA0A1B0GUQ0 79 aa7.95□□□□□ -1.14
PCAT1-202ENST00000561978 FAM236BA0A1B0GV22 79 aa7.95□□□□□ -1.14
PCAT1-202ENST00000561978 ANGP03950 147 aaKnown RBP7.95□□□□□ -1.14
PCAT1-202ENST00000561978 HTN3P15516 51 aa7.95□□□□□ -1.14
PCAT1-202ENST00000561978 MIR7-3HGQ8N6C7 128 aa7.95□□□□□ -1.14
PCAT1-202ENST00000561978 ANKRD29Q8N6D5 301 aa7.95□□□□□ -1.14
PCAT1-202ENST00000561978 WWC2-AS2Q96NR7 200 aa7.95□□□□□ -1.14
PCAT1-202ENST00000561978 REG3AQ06141 175 aa7.95□□□□□ -1.14
PCAT1-202ENST00000561978 H3BNG1 76 aa7.94□□□□□ -1.14
PCAT1-202ENST00000561978 COX7A2LO14548 114 aa7.94□□□□□ -1.14
PCAT1-202ENST00000561978 TMEM258P61165 79 aa7.94□□□□□ -1.14
PCAT1-202ENST00000561978 CARD19Q96LW7 228 aa7.94□□□□□ -1.14
PCAT1-202ENST00000561978 KRTAP9-6A0A140TA67 174 aa7.93□□□□□ -1.14
PCAT1-202ENST00000561978 LST1O00453 97 aa7.93□□□□□ -1.14
PCAT1-202ENST00000561978 CXCL5P42830 114 aa7.93□□□□□ -1.14
PCAT1-202ENST00000561978 DPH3Q96FX2 82 aa7.93□□□□□ -1.14
PCAT1-202ENST00000561978 CLPSL2Q6UWE3 100 aa7.93□□□□□ -1.14
PCAT1-202ENST00000561978 CHCHD10Q8WYQ3 142 aaPredicted RBP7.93□□□□□ -1.14
PCAT1-202ENST00000561978 SND1-IT1Q9HBX3 110 aa7.93□□□□□ -1.14
PCAT1-202ENST00000561978 PLECQ15149 4684 aaKnown RBP7.92□□□□□ -1.14
PCAT1-202ENST00000561978 H3BT86 120 aa7.92□□□□□ -1.14
PCAT1-202ENST00000561978 NDUFC2O95298 119 aa7.92□□□□□ -1.14
PCAT1-202ENST00000561978 CRPP02741 224 aa7.92□□□□□ -1.14
PCAT1-202ENST00000561978 PFN2P35080 140 aa7.92□□□□□ -1.14
PCAT1-202ENST00000561978 KMT2CQ8NEZ4 4911 aaKnown RBP7.92□□□□□ -1.14
PCAT1-202ENST00000561978 C11orf68Q9H3H3 251 aaKnown RBP7.91□□□□□ -1.14
PCAT1-202ENST00000561978 COX17Q14061 63 aa7.91□□□□□ -1.14
PCAT1-202ENST00000561978 CCL18P55774 89 aa7.9□□□□□ -1.14
PCAT1-202ENST00000561978 GAGE2AQ6NT46 116 aa7.9□□□□□ -1.14
PCAT1-202ENST00000561978 LYPD5Q6UWN5 251 aa7.9□□□□□ -1.14
PCAT1-202ENST00000561978 C2orf82Q6UX34 121 aa7.9□□□□□ -1.14
PCAT1-202ENST00000561978 MUC7Q8TAX7 377 aa7.9□□□□□ -1.14
PCAT1-202ENST00000561978 CLEC2BQ92478 149 aa7.9□□□□□ -1.14
PCAT1-202ENST00000561978 RPL28P46779 137 aaKnown RBP7.9□□□□□ -1.15
PCAT1-202ENST00000561978 NANOS2P60321 138 aaKnown RBP7.9□□□□□ -1.15
PCAT1-202ENST00000561978 CRYGAP11844 174 aa7.89□□□□□ -1.15
PCAT1-202ENST00000561978 PMAIP1Q13794 54 aa7.89□□□□□ -1.15
PCAT1-202ENST00000561978 C11orf45Q8TAV5 145 aa7.89□□□□□ -1.15
PCAT1-202ENST00000561978 PRR34Q9NV39 138 aa7.89□□□□□ -1.15
PCAT1-202ENST00000561978 VPREB1P12018 145 aa7.88□□□□□ -1.15
PCAT1-202ENST00000561978 KIAA0087Q14695 138 aa7.88□□□□□ -1.15
PCAT1-202ENST00000561978 KLK5Q9Y337 293 aaPredicted RBP7.88□□□□□ -1.15
PCAT1-202ENST00000561978 IGLV10-54A0A075B6I4 117 aa7.88□□□□□ -1.15
PCAT1-202ENST00000561978 TRAV8-4A0A0B4J246 113 aa7.88□□□□□ -1.15
PCAT1-202ENST00000561978 NTN5Q8WTR8 489 aaPredicted RBP7.88□□□□□ -1.15
PCAT1-202ENST00000561978 IGKV2-28A0A075B6P5 120 aa7.87□□□□□ -1.15
PCAT1-202ENST00000561978 IGKV2D-28P01615 120 aa7.87□□□□□ -1.15
PCAT1-202ENST00000561978 TRACP01848 142 aa7.87□□□□□ -1.15
PCAT1-202ENST00000561978 CASC10Q5T4H9 136 aa7.86□□□□□ -1.15
PCAT1-202ENST00000561978 LINC00337Q8N6G1 96 aa7.86□□□□□ -1.15
PCAT1-202ENST00000561978 UBE2WQ96B02 151 aa7.86□□□□□ -1.15
PCAT1-202ENST00000561978 KLK12Q9UKR0 248 aa7.86□□□□□ -1.15
PCAT1-202ENST00000561978 H0YGX0 51 aa7.86□□□□□ -1.15
PCAT1-202ENST00000561978 Q6ZTC4 211 aa7.86□□□□□ -1.15
PCAT1-202ENST00000561978 C2orf48Q96LS8 159 aa7.86□□□□□ -1.15
PCAT1-202ENST00000561978 DYNC2H1Q8NCM8 4307 aaKnown RBP7.85□□□□□ -1.15
PCAT1-202ENST00000561978 USP17L23D6RBM5 183 aa7.84□□□□□ -1.15
PCAT1-202ENST00000561978 C3orf84H3BNL1 204 aa7.84□□□□□ -1.15
PCAT1-202ENST00000561978 ENHOQ6UWT2 76 aa7.84□□□□□ -1.15
PCAT1-202ENST00000561978 TRBV7-7A0A0K0K1E9 115 aa7.83□□□□□ -1.16
PCAT1-202ENST00000561978 SPAG11BQ08648 103 aa7.83□□□□□ -1.16
PCAT1-202ENST00000561978 SMIM11BQ8TCY0 68 aa7.83□□□□□ -1.16
PCAT1-202ENST00000561978 TEX49A0A1B0GTD5 131 aa7.82□□□□□ -1.16
PCAT1-202ENST00000561978 IMUPQ9GZP8 106 aa7.82□□□□□ -1.16
PCAT1-202ENST00000561978 H3BS24 57 aa7.82□□□□□ -1.16
PCAT1-202ENST00000561978 KRTAP4-12Q9BQ66 201 aa7.82□□□□□ -1.16
PCAT1-202ENST00000561978 DEFB131BA0A096LNP1 70 aa7.81□□□□□ -1.16
PCAT1-202ENST00000561978 KMT2AQ03164 3969 aa7.81□□□□□ -1.16
PCAT1-202ENST00000561978 BAALC-AS2P0C853 105 aa7.8□□□□□ -1.16
PCAT1-202ENST00000561978 COX7CP15954 63 aa7.8□□□□□ -1.16
PCAT1-202ENST00000561978 GVQW2A0A096LPI5 108 aaPredicted RBP7.8□□□□□ -1.16
PCAT1-202ENST00000561978 DNAL4O96015 105 aa7.8□□□□□ -1.16
PCAT1-202ENST00000561978 HYDINQ4G0P3 5121 aa7.8□□□□□ -1.16
PCAT1-202ENST00000561978 SACSQ9NZJ4 4579 aa7.8□□□□□ -1.16
PCAT1-202ENST00000561978 NUPR2A6NF83 97 aa7.79□□□□□ -1.16
PCAT1-202ENST00000561978 MRPL55Q7Z7F7 128 aaKnown RBP7.79□□□□□ -1.16
PCAT1-202ENST00000561978 WFDC10BQ8IUB3 73 aa7.79□□□□□ -1.16
PCAT1-202ENST00000561978 TRAV10A0A0B4J240 114 aa7.79□□□□□ -1.16
PCAT1-202ENST00000561978 EPM2AB3EWF7 344 aa7.79□□□□□ -1.16
PCAT1-202ENST00000561978 ESRGQ1W209 222 aa7.79□□□□□ -1.16
PCAT1-202ENST00000561978 UNQ6190/PRO20217Q6UXQ8 127 aa7.79□□□□□ -1.16
PCAT1-202ENST00000561978 FAM218AQ96MZ4 157 aa7.79□□□□□ -1.16
PCAT1-202ENST00000561978 RYR3Q15413 4870 aa7.78□□□□□ -1.16
PCAT1-202ENST00000561978 FAM240AA0A1B0GVK7 77 aa7.77□□□□□ -1.17
PCAT1-202ENST00000561978 C9orf116Q5BN46 136 aaPredicted RBP7.77□□□□□ -1.17
PCAT1-202ENST00000561978 LINC01556Q5JQF7 62 aa7.77□□□□□ -1.17
PCAT1-202ENST00000561978 SERTAD4-AS1Q5TG53 156 aa7.77□□□□□ -1.17
PCAT1-202ENST00000561978 C15orf53Q8NAA6 179 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms