RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 C2CD3Q4AC94 2353 aa12.97□□□□□ -0.33
RAB40C-206ENST00000561781 RETNQ9HD89 108 aa12.97□□□□□ -0.33
RAB40C-206ENST00000561781 PRYO14603 147 aa12.97□□□□□ -0.33
RAB40C-206ENST00000561781 IGHV4-59P01825 116 aa12.97□□□□□ -0.33
RAB40C-206ENST00000561781 ESM1Q9NQ30 184 aa12.97□□□□□ -0.33
RAB40C-206ENST00000561781 RNASE1P07998 156 aaKnown RBP12.96□□□□□ -0.33
RAB40C-206ENST00000561781 H3BUX3 64 aa12.96□□□□□ -0.34
RAB40C-206ENST00000561781 PDE6GP18545 87 aa12.95□□□□□ -0.34
RAB40C-206ENST00000561781 ZNF561-AS1K7EIQ3 104 aa12.94□□□□□ -0.34
RAB40C-206ENST00000561781 NTM-AS1Q6ZSK4 140 aa12.94□□□□□ -0.34
RAB40C-206ENST00000561781 Q6ZTC4 211 aa12.94□□□□□ -0.34
RAB40C-206ENST00000561781 TRBV10-1A0A0K0K1A3 114 aa12.94□□□□□ -0.34
RAB40C-206ENST00000561781 BPY2O14599 106 aa12.93□□□□□ -0.34
RAB40C-206ENST00000561781 DAD1P61803 113 aa12.93□□□□□ -0.34
RAB40C-206ENST00000561781 C6orf223Q8N319 242 aa12.92□□□□□ -0.34
RAB40C-206ENST00000561781 A6NDX4 124 aa12.92□□□□□ -0.34
RAB40C-206ENST00000561781 Q1T7F1 81 aa12.92□□□□□ -0.34
RAB40C-206ENST00000561781 A0A087WZ39 114 aa12.91□□□□□ -0.34
RAB40C-206ENST00000561781 DNAJC9-AS1A6NH13 148 aa12.9□□□□□ -0.34
RAB40C-206ENST00000561781 C10orf99Q6UWK7 81 aa12.9□□□□□ -0.34
RAB40C-206ENST00000561781 TENM1Q9UKZ4 2725 aa12.9□□□□□ -0.34
RAB40C-206ENST00000561781 DEFB131AP59861 70 aa12.9□□□□□ -0.34
RAB40C-206ENST00000561781 NANOS2P60321 138 aaKnown RBP12.9□□□□□ -0.34
RAB40C-206ENST00000561781 C9orf66Q5T8R8 295 aa12.89□□□□□ -0.35
RAB40C-206ENST00000561781 C11orf44Q8N8P7 122 aa12.89□□□□□ -0.35
RAB40C-206ENST00000561781 M0R2N4 97 aa12.89□□□□□ -0.35
RAB40C-206ENST00000561781 Q6YL49 198 aa12.89□□□□□ -0.35
RAB40C-206ENST00000561781 UBE2L6O14933 153 aa12.88□□□□□ -0.35
RAB40C-206ENST00000561781 COL6A5A8TX70 2615 aa12.86□□□□□ -0.35
RAB40C-206ENST00000561781 hDV103S1A0JD37 113 aa12.86□□□□□ -0.35
RAB40C-206ENST00000561781 TMEM89A2RUT3 159 aa12.85□□□□□ -0.35
RAB40C-206ENST00000561781 IGKV3OR2-268A0A0C4DH90 116 aa12.84□□□□□ -0.35
RAB40C-206ENST00000561781 A8MTW9 85 aa12.84□□□□□ -0.35
RAB40C-206ENST00000561781 H3BQ85 93 aa12.83□□□□□ -0.35
RAB40C-206ENST00000561781 LINC00575Q6W349 94 aa12.83□□□□□ -0.35
RAB40C-206ENST00000561781 MRPL55Q7Z7F7 128 aaKnown RBP12.83□□□□□ -0.35
RAB40C-206ENST00000561781 IGHV3OR16-9A0A0B4J2B5 98 aa12.82□□□□□ -0.36
RAB40C-206ENST00000561781 Q6ZRP5 223 aa12.82□□□□□ -0.36
RAB40C-206ENST00000561781 OCR1Q9BZK8 76 aa12.82□□□□□ -0.36
RAB40C-206ENST00000561781 SCXQ7RTU7 201 aa12.81□□□□□ -0.36
RAB40C-206ENST00000561781 STAB1Q9NY15 2570 aa12.8□□□□□ -0.36
RAB40C-206ENST00000561781 TRGV1A0A0A0MS02 117 aa12.8□□□□□ -0.36
RAB40C-206ENST00000561781 C6orf99Q4VX62 202 aa12.8□□□□□ -0.36
RAB40C-206ENST00000561781 MUC7Q8TAX7 377 aa12.79□□□□□ -0.36
RAB40C-206ENST00000561781 PRR3P79522 188 aaKnown RBP12.78□□□□□ -0.36
RAB40C-206ENST00000561781 INSP01308 110 aa12.77□□□□□ -0.37
RAB40C-206ENST00000561781 TRRAPQ9Y4A5 3859 aa12.77□□□□□ -0.37
RAB40C-206ENST00000561781 SPATA3Q8NHX4 192 aa12.76□□□□□ -0.37
RAB40C-206ENST00000561781 HIGD2AQ9BW72 106 aa12.76□□□□□ -0.37
RAB40C-206ENST00000561781 KRTAP24-1Q3LI83 254 aa12.76□□□□□ -0.37
RAB40C-206ENST00000561781 CD164L2Q6UWJ8 174 aa12.76□□□□□ -0.37
RAB40C-206ENST00000561781 DNHD1Q96M86 4753 aa12.74□□□□□ -0.37
RAB40C-206ENST00000561781 IGLV4-60A0A075B6I1 120 aa12.74□□□□□ -0.37
RAB40C-206ENST00000561781 PSPHP1O15172 72 aa12.72□□□□□ -0.37
RAB40C-206ENST00000561781 ZNF702PQ9H963 129 aa12.72□□□□□ -0.37
RAB40C-206ENST00000561781 C1orf64Q8NEQ6 169 aa12.72□□□□□ -0.37
RAB40C-206ENST00000561781 MAP6D1Q9H9H5 199 aa12.72□□□□□ -0.37
RAB40C-206ENST00000561781 TRAV22A0A0B4J277 110 aa12.71□□□□□ -0.37
RAB40C-206ENST00000561781 LYRM9A8MSI8 78 aa12.71□□□□□ -0.37
RAB40C-206ENST00000561781 LRCOL1A6NCL2 159 aa12.71□□□□□ -0.38
RAB40C-206ENST00000561781 VWFP04275 2813 aa12.7□□□□□ -0.38
RAB40C-206ENST00000561781 IGKV4-1P06312 121 aa12.7□□□□□ -0.38
RAB40C-206ENST00000561781 KTN1-AS1Q86SY8 53 aa12.7□□□□□ -0.38
RAB40C-206ENST00000561781 LOC100131303A0A0U1RQF7 123 aa12.69□□□□□ -0.38
RAB40C-206ENST00000561781 SLURP1P55000 103 aa12.69□□□□□ -0.38
RAB40C-206ENST00000561781 Q8IZM0 81 aa12.69□□□□□ -0.38
RAB40C-206ENST00000561781 UBE2E2Q96LR5 201 aa12.69□□□□□ -0.38
RAB40C-206ENST00000561781 Q6ZQY7 126 aa12.68□□□□□ -0.38
RAB40C-206ENST00000561781 LINC01006Q8NI28 216 aa12.68□□□□□ -0.38
RAB40C-206ENST00000561781 COX17Q14061 63 aa12.68□□□□□ -0.38
RAB40C-206ENST00000561781 DEFB136Q30KP8 78 aa12.68□□□□□ -0.38
RAB40C-206ENST00000561781 MDFIQ99750 246 aa12.68□□□□□ -0.38
RAB40C-206ENST00000561781 UBE2BP63146 152 aa12.67□□□□□ -0.38
RAB40C-206ENST00000561781 RBM12B-AS1Q9P1G2 102 aa12.67□□□□□ -0.38
RAB40C-206ENST00000561781 ANK2Q01484 3957 aa12.64□□□□□ -0.39
RAB40C-206ENST00000561781 KRTAP10-3P60369 221 aa12.64□□□□□ -0.39
RAB40C-206ENST00000561781 SYCNQ0VAF6 134 aa12.63□□□□□ -0.39
RAB40C-206ENST00000561781 C18orf65Q6ZTR6 163 aa12.63□□□□□ -0.39
RAB40C-206ENST00000561781 Q8N9L7 120 aa12.63□□□□□ -0.39
RAB40C-206ENST00000561781 WNK1Q9H4A3 2382 aa12.63□□□□□ -0.39
RAB40C-206ENST00000561781 COX7BP24311 80 aa12.62□□□□□ -0.39
RAB40C-206ENST00000561781 LCE6AA0A183 80 aa12.62□□□□□ -0.39
RAB40C-206ENST00000561781 LINC00959A0A1B0GUT2 108 aa12.62□□□□□ -0.39
RAB40C-206ENST00000561781 NOP10Q9NPE3 64 aaKnown RBP12.62□□□□□ -0.39
RAB40C-206ENST00000561781 LINC00588Q9Y4M8 146 aa12.62□□□□□ -0.39
RAB40C-206ENST00000561781 TRBV6-8A0A0A6YYG3 113 aa12.6□□□□□ -0.39
RAB40C-206ENST00000561781 PKD1L1Q8TDX9 2849 aa12.6□□□□□ -0.39
RAB40C-206ENST00000561781 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.59□□□□□ -0.39
RAB40C-206ENST00000561781 CYP4F30PQ9H0H9 118 aa12.59□□□□□ -0.39
RAB40C-206ENST00000561781 KHDC1LQ5JSQ8 128 aa12.59□□□□□ -0.39
RAB40C-206ENST00000561781 Q8NDZ9 215 aa12.58□□□□□ -0.4
RAB40C-206ENST00000561781 A8MUN3 132 aa12.58□□□□□ -0.4
RAB40C-206ENST00000561781 PSCAO43653 123 aa12.58□□□□□ -0.4
RAB40C-206ENST00000561781 TRGV2A0A075B6R0 118 aa12.57□□□□□ -0.4
RAB40C-206ENST00000561781 DEFB114Q30KQ6 69 aa12.57□□□□□ -0.4
RAB40C-206ENST00000561781 STHQ8IWL8 128 aa12.57□□□□□ -0.4
RAB40C-206ENST00000561781 UBE2AP49459 152 aa12.56□□□□□ -0.4
RAB40C-206ENST00000561781 NDUFS5O43920 106 aa12.56□□□□□ -0.4
RAB40C-206ENST00000561781 M0R378 163 aa12.54□□□□□ -0.4
RAB40C-206ENST00000561781 ODF3L2Q3SX64 289 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms