RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
SPG11-224ENST00000561268 LINC01620Q4KN68 170 aa4.61□□□□□ -1.67
SPG11-224ENST00000561268 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
SPG11-224ENST00000561268 Q6ZUT4 128 aa4.61□□□□□ -1.67
SPG11-224ENST00000561268 MUSTN1Q8IVN3 82 aa4.61□□□□□ -1.67
SPG11-224ENST00000561268 NDUFA12Q9UI09 145 aa4.61□□□□□ -1.67
SPG11-224ENST00000561268 LRCOL1A6NCL2 159 aa4.6□□□□□ -1.67
SPG11-224ENST00000561268 IBA57-AS1B1ANH7 110 aa4.6□□□□□ -1.67
SPG11-224ENST00000561268 F8WDY8 70 aa4.6□□□□□ -1.67
SPG11-224ENST00000561268 LST1O00453 97 aa4.6□□□□□ -1.67
SPG11-224ENST00000561268 LELP1Q5T871 98 aa4.6□□□□□ -1.67
SPG11-224ENST00000561268 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
SPG11-224ENST00000561268 IMUPQ9GZP8 106 aa4.6□□□□□ -1.67
SPG11-224ENST00000561268 GEMIN7Q9H840 131 aaKnown RBP4.6□□□□□ -1.67
SPG11-224ENST00000561268 TRACP01848 142 aa4.59□□□□□ -1.67
SPG11-224ENST00000561268 RPL36AP83881 106 aaKnown RBP4.59□□□□□ -1.67
SPG11-224ENST00000561268 Q6ZSN1 163 aa4.59□□□□□ -1.67
SPG11-224ENST00000561268 RPL36ALQ969Q0 106 aaKnown RBP4.59□□□□□ -1.67
SPG11-224ENST00000561268 SPINK8P0C7L1 97 aa4.58□□□□□ -1.68
SPG11-224ENST00000561268 XGP55808 180 aa4.58□□□□□ -1.68
SPG11-224ENST00000561268 LINC01561Q8N1V8 128 aa4.58□□□□□ -1.68
SPG11-224ENST00000561268 NTN5Q8WTR8 489 aaPredicted RBP4.58□□□□□ -1.68
SPG11-224ENST00000561268 C9JAW5 83 aa4.57□□□□□ -1.68
SPG11-224ENST00000561268 TRIAP1O43715 76 aa4.57□□□□□ -1.68
SPG11-224ENST00000561268 EIF4EBP3O60516 100 aaPredicted RBP4.57□□□□□ -1.68
SPG11-224ENST00000561268 KRTAP10-1P60331 282 aa4.57□□□□□ -1.68
SPG11-224ENST00000561268 CKS1BP61024 79 aa4.57□□□□□ -1.68
SPG11-224ENST00000561268 DGAT2L7PQ6IED9 249 aa4.57□□□□□ -1.68
SPG11-224ENST00000561268 Q6ZSA8 131 aa4.57□□□□□ -1.68
SPG11-224ENST00000561268 UBE2WQ96B02 151 aa4.57□□□□□ -1.68
SPG11-224ENST00000561268 ZNF625Q96I27 306 aaPredicted RBP4.57□□□□□ -1.68
SPG11-224ENST00000561268 TMEM101Q96IK0 257 aa4.57□□□□□ -1.68
SPG11-224ENST00000561268 Q9UF83 564 aa4.57□□□□□ -1.68
SPG11-224ENST00000561268 FAT1Q14517 4588 aa4.56□□□□□ -1.68
SPG11-224ENST00000561268 Q1RN00 199 aa4.56□□□□□ -1.68
SPG11-224ENST00000561268 LINC00242Q5T6M2 205 aa4.56□□□□□ -1.68
SPG11-224ENST00000561268 SDIM1Q6ZPB5 146 aa4.56□□□□□ -1.68
SPG11-224ENST00000561268 OPRPNQ99935 248 aaPredicted RBP4.56□□□□□ -1.68
SPG11-224ENST00000561268 CDC42SE2Q9NRR3 84 aa4.56□□□□□ -1.68
SPG11-224ENST00000561268 DNAH8Q96JB1 4490 aa4.56□□□□□ -1.68
SPG11-224ENST00000561268 IGHV3-73A0A0B4J1V6 119 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 TRAV13-2A0A0B4J235 113 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 SMIM1B2RUZ4 78 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 COX7A2LO14548 114 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 SNCGO76070 127 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 PRSS2P07478 247 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 INAFM2P0DMQ5 153 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 FUSP35637 526 aaKnown RBP eCLIP4.55□□□□□ -1.68
SPG11-224ENST00000561268 C5orf47Q569G3 176 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 ADAMTSL4-AS1Q5T5F5 129 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 C2orf82Q6UX34 121 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 Q8N814 137 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 LINC00308Q8TCZ7 52 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 CDKN2A-AS1Q9UH64 79 aa4.55□□□□□ -1.68
SPG11-224ENST00000561268 FLG2Q5D862 2391 aaPredicted RBP4.54□□□□□ -1.68
SPG11-224ENST00000561268 TRAV8-3A0A0A6YYJ7 113 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 TRAV8-4A0A0B4J246 113 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 TRBV7-7A0A0K0K1E9 115 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 A0A1B0GX51 115 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 GAGE12JA6NER3 117 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 H0YGX0 51 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 RPL28P46779 137 aaKnown RBP4.54□□□□□ -1.68
SPG11-224ENST00000561268 GAGE2BQ13066 116 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 GAGE4Q13068 117 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 GAGE5Q13069 117 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 GAGE2EQ4V326 116 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 DAND5Q8N907 189 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 TMEM243Q9BU79 118 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 GAGE2DQ9UEU5 116 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 VPS13BQ7Z7G8 4022 aa4.54□□□□□ -1.68
SPG11-224ENST00000561268 A0A1B0GUV1 79 aa4.53□□□□□ -1.68
SPG11-224ENST00000561268 MT-ATP8P03928 68 aa4.53□□□□□ -1.68
SPG11-224ENST00000561268 MEIG1Q5JSS6 88 aa4.53□□□□□ -1.68
SPG11-224ENST00000561268 DMBT1Q9UGM3 2413 aaPredicted RBP4.52□□□□□ -1.69
SPG11-224ENST00000561268 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.52□□□□□ -1.69
SPG11-224ENST00000561268 IGKV2-29A2NJV5 120 aaPredicted RBP4.52□□□□□ -1.69
SPG11-224ENST00000561268 EPM2AB3EWF7 344 aa4.52□□□□□ -1.69
SPG11-224ENST00000561268 CXCL5P42830 114 aa4.52□□□□□ -1.69
SPG11-224ENST00000561268 Q5VSD8 79 aa4.52□□□□□ -1.69
SPG11-224ENST00000561268 Q9HAA7 133 aa4.52□□□□□ -1.69
SPG11-224ENST00000561268 A0A087WZ39 114 aa4.51□□□□□ -1.69
SPG11-224ENST00000561268 IGLV5-52A0A0A0MRZ9 124 aa4.51□□□□□ -1.69
SPG11-224ENST00000561268 TRBV6-8A0A0A6YYG3 113 aa4.51□□□□□ -1.69
SPG11-224ENST00000561268 UBE2L6O14933 153 aa4.51□□□□□ -1.69
SPG11-224ENST00000561268 PSCAO43653 123 aa4.51□□□□□ -1.69
SPG11-224ENST00000561268 GAGE6Q13070 117 aa4.51□□□□□ -1.69
SPG11-224ENST00000561268 COX17Q14061 63 aa4.51□□□□□ -1.69
SPG11-224ENST00000561268 NTM-AS1Q6ZSK4 140 aa4.51□□□□□ -1.69
SPG11-224ENST00000561268 LINC00643Q86TS7 51 aa4.51□□□□□ -1.69
SPG11-224ENST00000561268 FAM30AQ9NZY2 134 aa4.51□□□□□ -1.69
SPG11-224ENST00000561268 IGHV3-64A0A075B6Q5 118 aa4.5□□□□□ -1.69
SPG11-224ENST00000561268 IGHV3OR16-9A0A0B4J2B5 98 aa4.5□□□□□ -1.69
SPG11-224ENST00000561268 TEX49A0A1B0GTD5 131 aa4.5□□□□□ -1.69
SPG11-224ENST00000561268 H3BQ85 93 aa4.5□□□□□ -1.69
SPG11-224ENST00000561268 NDUFV3P56181 108 aaKnown RBP4.5□□□□□ -1.69
SPG11-224ENST00000561268 KRTAP26-1Q6PEX3 210 aa4.5□□□□□ -1.69
SPG11-224ENST00000561268 ANAPC13Q9BS18 74 aa4.5□□□□□ -1.69
SPG11-224ENST00000561268 PRR34Q9NV39 138 aa4.5□□□□□ -1.69
SPG11-224ENST00000561268 MYCBP2O75592 4640 aa4.5□□□□□ -1.69
SPG11-224ENST00000561268 NDUFC2O95298 119 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms