RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 APCP25054 2843 aa0.53□□□□□ -2.32
CTDSPL2-211ENST00000561189 ABCA8O94911 1581 aa0.53□□□□□ -2.33
CTDSPL2-211ENST00000561189 PIK3C2BO00750 1634 aa0.53□□□□□ -2.33
CTDSPL2-211ENST00000561189 BIVM-ERCC5R4GMW8 1640 aa0.53□□□□□ -2.33
CTDSPL2-211ENST00000561189 GVINP1Q7Z2Y8 2422 aa0.52□□□□□ -2.33
CTDSPL2-211ENST00000561189 A0A1B0GUT8 65 aa0.52□□□□□ -2.33
CTDSPL2-211ENST00000561189 Q8IZM0 81 aa0.52□□□□□ -2.33
CTDSPL2-211ENST00000561189 DNMBPQ6XZF7 1577 aa0.52□□□□□ -2.33
CTDSPL2-211ENST00000561189 CFAP74Q9C0B2 1584 aa0.52□□□□□ -2.33
CTDSPL2-211ENST00000561189 MYO5CQ9NQX4 1742 aa0.52□□□□□ -2.33
CTDSPL2-211ENST00000561189 TRAV21A0A0B4J279 112 aa0.51□□□□□ -2.33
CTDSPL2-211ENST00000561189 K7EQZ3 153 aa0.51□□□□□ -2.33
CTDSPL2-211ENST00000561189 POLR1AO95602 1720 aaPredicted RBP0.51□□□□□ -2.33
CTDSPL2-211ENST00000561189 ACYP1P07311 99 aa0.51□□□□□ -2.33
CTDSPL2-211ENST00000561189 NCOA2Q15596 1464 aa0.51□□□□□ -2.33
CTDSPL2-211ENST00000561189 CACNA1EQ15878 2313 aa0.51□□□□□ -2.33
CTDSPL2-211ENST00000561189 PIGYQ3MUY2 71 aa0.51□□□□□ -2.33
CTDSPL2-211ENST00000561189 TENM3Q9P273 2699 aa0.51□□□□□ -2.33
CTDSPL2-211ENST00000561189 CHD9Q3L8U1 2897 aa0.51□□□□□ -2.33
CTDSPL2-211ENST00000561189 DOT1LQ8TEK3 1739 aa0.5□□□□□ -2.33
CTDSPL2-211ENST00000561189 DEFB123Q8N688 67 aa0.5□□□□□ -2.33
CTDSPL2-211ENST00000561189 TPRP12270 2363 aaKnown RBP0.5□□□□□ -2.33
CTDSPL2-211ENST00000561189 DSTQ03001 7570 aaKnown RBP0.5□□□□□ -2.33
CTDSPL2-211ENST00000561189 TSC2P49815 1807 aa0.5□□□□□ -2.33
CTDSPL2-211ENST00000561189 ARFGEF2Q9Y6D5 1785 aa0.5□□□□□ -2.33
CTDSPL2-211ENST00000561189 LRRC37AA6NMS7 1700 aa0.5□□□□□ -2.33
CTDSPL2-211ENST00000561189 NEBP20929 6669 aa0.49□□□□□ -2.33
CTDSPL2-211ENST00000561189 SPTBN1Q01082 2364 aaKnown RBP0.49□□□□□ -2.33
CTDSPL2-211ENST00000561189 SETBP1Q9Y6X0 1596 aa0.49□□□□□ -2.33
CTDSPL2-211ENST00000561189 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.49□□□□□ -2.339e-9■■■■■ 32.9
CTDSPL2-211ENST00000561189 SPINK1P00995 79 aa0.49□□□□□ -2.33
CTDSPL2-211ENST00000561189 WFDC9Q8NEX5 89 aa0.49□□□□□ -2.33
CTDSPL2-211ENST00000561189 C18orf32Q8TCD1 76 aa0.49□□□□□ -2.33
CTDSPL2-211ENST00000561189 GAFA1Q96PS6 74 aa0.49□□□□□ -2.33
CTDSPL2-211ENST00000561189 RGPD8O14715 1765 aaPredicted RBP0.49□□□□□ -2.33
CTDSPL2-211ENST00000561189 COL14A1Q05707 1796 aaKnown RBP0.49□□□□□ -2.33
CTDSPL2-211ENST00000561189 RGPD5Q99666 1765 aa0.49□□□□□ -2.33
CTDSPL2-211ENST00000561189 QSER1Q2KHR3 1735 aa0.49□□□□□ -2.33
CTDSPL2-211ENST00000561189 UGGT2Q9NYU1 1516 aa0.48□□□□□ -2.33
CTDSPL2-211ENST00000561189 CCDC88BA6NC98 1476 aa0.48□□□□□ -2.33
CTDSPL2-211ENST00000561189 CELSR2Q9HCU4 2923 aa0.48□□□□□ -2.33
CTDSPL2-211ENST00000561189 SMIM13P0DJ93 91 aa0.48□□□□□ -2.33
CTDSPL2-211ENST00000561189 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
CTDSPL2-211ENST00000561189 LELP1Q5T871 98 aa0.48□□□□□ -2.33
CTDSPL2-211ENST00000561189 NKTRP30414 1462 aaKnown RBP0.48□□□□□ -2.33
CTDSPL2-211ENST00000561189 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 PTPRZ1P23471 2315 aaPredicted RBP0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 PTPRQQ9UMZ3 2332 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 CFDP00746 253 aaPredicted RBP0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 IFI6P09912 130 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 SPRR1BP22528 89 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 COX7BP24311 80 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 DEFA5Q01523 94 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 KLK9Q2XQG4 91 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 DEFB121Q5J5C9 76 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 ADAMTS12P58397 1594 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 ABCC1P33527 1531 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 URB2Q14146 1524 aaKnown RBP0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 SCN11AQ9UI33 1791 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 LRRC9Q6ZRR7 1453 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 TIAM2Q8IVF5 1701 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 ANKARQ7Z5J8 1434 aa0.47□□□□□ -2.33
CTDSPL2-211ENST00000561189 PTPN23Q9H3S7 1636 aa0.46□□□□□ -2.34
CTDSPL2-211ENST00000561189 UBR3Q6ZT12 1888 aa0.46□□□□□ -2.34
CTDSPL2-211ENST00000561189 A0A087WXM4 84 aa0.46□□□□□ -2.34
CTDSPL2-211ENST00000561189 SPTY2D1-AS1A0A0U1RR47 76 aa0.46□□□□□ -2.34
CTDSPL2-211ENST00000561189 COX6B1P14854 86 aa0.46□□□□□ -2.34
CTDSPL2-211ENST00000561189 SPRR1AP35321 89 aa0.46□□□□□ -2.34
CTDSPL2-211ENST00000561189 FXYD6Q9H0Q3 95 aa0.46□□□□□ -2.34
CTDSPL2-211ENST00000561189 IGF2RP11717 2491 aa0.46□□□□□ -2.34
CTDSPL2-211ENST00000561189 RICTORQ6R327 1708 aa0.46□□□□□ -2.34
CTDSPL2-211ENST00000561189 SYNE1Q8NF91 8797 aaKnown RBP0.45□□□□□ -2.34
CTDSPL2-211ENST00000561189 ITSN1Q15811 1721 aa0.45□□□□□ -2.34
CTDSPL2-211ENST00000561189 CPSF4LA6NMK7 179 aaKnown RBP0.45□□□□□ -2.34
CTDSPL2-211ENST00000561189 SMCO4Q9NRQ5 59 aa0.45□□□□□ -2.34
CTDSPL2-211ENST00000561189 APLNQ9ULZ1 77 aa0.45□□□□□ -2.34
CTDSPL2-211ENST00000561189 AKAP6Q13023 2319 aa0.45□□□□□ -2.34
CTDSPL2-211ENST00000561189 CHD6Q8TD26 2715 aa0.45□□□□□ -2.34
CTDSPL2-211ENST00000561189 CFAP43Q8NDM7 1665 aa0.45□□□□□ -2.34
CTDSPL2-211ENST00000561189 MADDQ8WXG6 1647 aa0.45□□□□□ -2.34
CTDSPL2-211ENST00000561189 BCORQ6W2J9 1755 aa0.45□□□□□ -2.34
CTDSPL2-211ENST00000561189 MAGI3Q5TCQ9 1506 aa0.44□□□□□ -2.34
CTDSPL2-211ENST00000561189 PLCH1Q4KWH8 1693 aa0.44□□□□□ -2.34
CTDSPL2-211ENST00000561189 ZC3H13Q5T200 1668 aaKnown RBP0.44□□□□□ -2.34
CTDSPL2-211ENST00000561189 TNCP24821 2201 aa0.44□□□□□ -2.34
CTDSPL2-211ENST00000561189 Q5BKY6 102 aa0.44□□□□□ -2.34
CTDSPL2-211ENST00000561189 HILPDAQ9Y5L2 63 aa0.44□□□□□ -2.34
CTDSPL2-211ENST00000561189 PREX1Q8TCU6 1659 aa0.43□□□□□ -2.34
CTDSPL2-211ENST00000561189 CD163L1Q9NR16 1453 aa0.43□□□□□ -2.34
CTDSPL2-211ENST00000561189 CSMD3Q7Z407 3707 aa0.43□□□□□ -2.34
CTDSPL2-211ENST00000561189 I3L3M4 83 aa0.43□□□□□ -2.34
CTDSPL2-211ENST00000561189 IFI27P40305 119 aaPredicted RBP0.43□□□□□ -2.34
CTDSPL2-211ENST00000561189 NREPQ16612 68 aa0.43□□□□□ -2.34
CTDSPL2-211ENST00000561189 Q5VSD8 79 aa0.43□□□□□ -2.34
CTDSPL2-211ENST00000561189 DEFB105AQ8NG35 78 aa0.43□□□□□ -2.34
CTDSPL2-211ENST00000561189 USMG5Q96IX5 58 aa0.43□□□□□ -2.34
CTDSPL2-211ENST00000561189 MRPL34Q9BQ48 92 aaKnown RBP0.43□□□□□ -2.34
CTDSPL2-211ENST00000561189 PARP4Q9UKK3 1724 aaKnown RBP0.42□□□□□ -2.34
CTDSPL2-211ENST00000561189 UMAD1C9J7I0 102 aa0.42□□□□□ -2.34
CTDSPL2-211ENST00000561189 H3BVH4 76 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms