RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 KCPQ6ZWJ8 1503 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 SSC5DA1L4H1 1573 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 ARHGEF5Q12774 1597 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 SPTBP11277 2137 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 ZC3H13Q5T200 1668 aaKnown RBP0.79□□□□□ -2.28
HMG20A-211ENST00000560867 PRDM2Q13029 1718 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 KIAA1551Q9HCM1 1747 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 TRBV25-1A0A075B6N4 114 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 UQCRHLA0A096LP55 91 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 F2Z2F3 143 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 M0R3E3 92 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 SAA2P0DJI9 122 aaPredicted RBP0.79□□□□□ -2.28
HMG20A-211ENST00000560867 SPINT3P49223 89 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 PMCHL1Q16048 86 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 SPRR4Q96PI1 79 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 LAMA4Q16363 1823 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 EEA1Q15075 1411 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 NRXN1Q9ULB1 1477 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 DOCK11Q5JSL3 2073 aa0.79□□□□□ -2.28
HMG20A-211ENST00000560867 NRXN3Q9Y4C0 1643 aa0.78□□□□□ -2.28
HMG20A-211ENST00000560867 PSME4Q14997 1843 aa0.78□□□□□ -2.28
HMG20A-211ENST00000560867 PARP14Q460N5 1801 aa0.78□□□□□ -2.28
HMG20A-211ENST00000560867 FAT4Q6V0I7 4981 aa0.78□□□□□ -2.28
HMG20A-211ENST00000560867 SPENQ96T58 3664 aaKnown RBP0.78□□□□□ -2.28
HMG20A-211ENST00000560867 CYB5AP00167 134 aa0.78□□□□□ -2.28
HMG20A-211ENST00000560867 UQCRHP07919 91 aa0.78□□□□□ -2.28
HMG20A-211ENST00000560867 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
HMG20A-211ENST00000560867 SMIM4Q8WVI0 70 aa0.78□□□□□ -2.28
HMG20A-211ENST00000560867 S100A16Q96FQ6 103 aaKnown RBP0.78□□□□□ -2.28
HMG20A-211ENST00000560867 FANCAO15360 1455 aa0.78□□□□□ -2.28
HMG20A-211ENST00000560867 LRRC9Q6ZRR7 1453 aa0.78□□□□□ -2.28
HMG20A-211ENST00000560867 DIP2CQ9Y2E4 1556 aa0.78□□□□□ -2.29
HMG20A-211ENST00000560867 POLR1AO95602 1720 aaPredicted RBP0.78□□□□□ -2.29
HMG20A-211ENST00000560867 SIPA1L3O60292 1781 aaPredicted RBP0.78□□□□□ -2.29
HMG20A-211ENST00000560867 COL12A1Q99715 3063 aa0.78□□□□□ -2.29
HMG20A-211ENST00000560867 C7orf77A4D0Y5 90 aa0.77□□□□□ -2.29
HMG20A-211ENST00000560867 GCHFRP30047 84 aa0.77□□□□□ -2.29
HMG20A-211ENST00000560867 PEA15Q15121 130 aa0.77□□□□□ -2.29
HMG20A-211ENST00000560867 PLIN4Q96Q06 1357 aa0.77□□□□□ -2.29
HMG20A-211ENST00000560867 CCDC18Q5T9S5 1454 aa0.77□□□□□ -2.29
HMG20A-211ENST00000560867 ARHGAP35Q9NRY4 1499 aa0.77□□□□□ -2.29
HMG20A-211ENST00000560867 C3P01024 1663 aa0.77□□□□□ -2.29
HMG20A-211ENST00000560867 ABCA1O95477 2261 aa0.77□□□□□ -2.29
HMG20A-211ENST00000560867 ZZEF1O43149 2961 aa0.77□□□□□ -2.29
HMG20A-211ENST00000560867 FREM2Q5SZK8 3169 aa0.77□□□□□ -2.29
HMG20A-211ENST00000560867 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
HMG20A-211ENST00000560867 PRRC2CQ9Y520 2896 aaKnown RBP0.76□□□□□ -2.29
HMG20A-211ENST00000560867 AHCTF1Q8WYP5 2266 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 PI4KAP42356 2102 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 DOCK2Q92608 1830 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 ITSN2Q9NZM3 1697 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 UGGT1Q9NYU2 1555 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 ABCC3O15438 1527 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 URB2Q14146 1524 aaKnown RBP0.76□□□□□ -2.29
HMG20A-211ENST00000560867 ARHGEF12Q9NZN5 1544 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 CEP162Q5TB80 1403 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 EDC4Q6P2E9 1401 aaKnown RBP0.76□□□□□ -2.29
HMG20A-211ENST00000560867 A0A1B0GWA3 101 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 ZNF815PA8K554 130 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 BCE1O60756 84 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 MGPP08493 103 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 COX17Q14061 63 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 SPINK9Q5DT21 86 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 PSMG4Q5JS54 123 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 PRR15LQ9BU68 103 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 PROK2Q9HC23 129 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 PSENENQ9NZ42 101 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 ITPR2Q14571 2701 aa0.76□□□□□ -2.29
HMG20A-211ENST00000560867 SPTBN1Q01082 2364 aaKnown RBP0.76□□□□□ -2.29
HMG20A-211ENST00000560867 ZNF236Q9UL36 1845 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 LOC285556D6RIA3 1793 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 SSPOA2VEC9 5147 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 CSMD2Q7Z408 3487 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 ATP10BO94823 1461 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 DMXL1Q9Y485 3027 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 F8WEM9 126 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 H3BQF6 201 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 ETDBQ3ZM63 59 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 FDCSPQ8NFU4 85 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 TMEM263Q8WUH6 116 aaKnown RBP0.75□□□□□ -2.29
HMG20A-211ENST00000560867 LINC00846Q9NV44 126 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 APCP25054 2843 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 TANC1Q9C0D5 1861 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 PKD1L3Q7Z443 1732 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 IFT172Q9UG01 1749 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 SVEP1Q4LDE5 3571 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 LRBAP50851 2863 aa0.75□□□□□ -2.29
HMG20A-211ENST00000560867 HIVEP1P15822 2718 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 UACAQ9BZF9 1416 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 A0A087WVE0 104 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 A0A0D9SG42 100 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 ARMS2P0C7Q2 107 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 FXYD6P3P58550 94 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 WFDC2Q14508 124 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 NMSQ5H8A3 153 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 C10orf95Q9H7T3 257 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 RABAC1Q9UI14 185 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 CADP27708 2225 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 PAPPAQ13219 1627 aa0.74□□□□□ -2.29
HMG20A-211ENST00000560867 OTOGQ6ZRI0 2925 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms