RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 FHAD1B1AJZ9 1412 aa-3.67□□□□□ -3
LINC00648-203ENST00000556923 CKS1BP61024 79 aa-3.67□□□□□ -3
LINC00648-203ENST00000556923 TSLPQ969D9 159 aa-3.67□□□□□ -3
LINC00648-203ENST00000556923 MGPP08493 103 aa-3.68□□□□□ -3
LINC00648-203ENST00000556923 PCNTO95613 3336 aa-3.69□□□□□ -3
LINC00648-203ENST00000556923 FAM223BA6NKX1 122 aa-3.69□□□□□ -3
LINC00648-203ENST00000556923 HIGD1BQ9P298 99 aa-3.69□□□□□ -3
LINC00648-203ENST00000556923 TIAM2Q8IVF5 1701 aa-3.7□□□□□ -3
LINC00648-203ENST00000556923 PP6455Q8WZ26 134 aa-3.7□□□□□ -3
LINC00648-203ENST00000556923 DPH3Q96FX2 82 aa-3.7□□□□□ -3
LINC00648-203ENST00000556923 I3L3M4 83 aa-3.71□□□□□ -3
LINC00648-203ENST00000556923 SCGB1A1P11684 91 aa-3.71□□□□□ -3
LINC00648-203ENST00000556923 HIST1H1DP16402 221 aaKnown RBP-3.71□□□□□ -3
LINC00648-203ENST00000556923 B2MP61769 119 aa-3.71□□□□□ -3
LINC00648-203ENST00000556923 MKI67P46013 3256 aaKnown RBP-3.72□□□□□ -3
LINC00648-203ENST00000556923 LOC285095A0A1B0GVY8 99 aa-3.72□□□□□ -3
LINC00648-203ENST00000556923 S100A5P33763 92 aa-3.72□□□□□ -3
LINC00648-203ENST00000556923 PRO3102Q9H379 93 aa-3.72□□□□□ -3
LINC00648-203ENST00000556923 MYOM1P52179 1685 aa-3.72□□□□□ -3.01
LINC00648-203ENST00000556923 PRDM15P57071 1507 aaPredicted RBP-3.73□□□□□ -3.01
LINC00648-203ENST00000556923 MMP24-AS1A0A0U1RRL7 71 aa-3.73□□□□□ -3.01
LINC00648-203ENST00000556923 C12orf73Q69YU5 71 aa-3.73□□□□□ -3.01
LINC00648-203ENST00000556923 MRPL54Q6P161 138 aaKnown RBP-3.73□□□□□ -3.01
LINC00648-203ENST00000556923 FDCSPQ8NFU4 85 aa-3.73□□□□□ -3.01
LINC00648-203ENST00000556923 LINC01546A6NGU7 62 aa-3.74□□□□□ -3.01
LINC00648-203ENST00000556923 BTG2P78543 158 aa-3.74□□□□□ -3.01
LINC00648-203ENST00000556923 TMEM191AQ9H0A3 160 aa-3.74□□□□□ -3.01
LINC00648-203ENST00000556923 TPT1P8Q9HAU6 139 aa-3.74□□□□□ -3.01
LINC00648-203ENST00000556923 NCOA3Q9Y6Q9 1424 aa-3.74□□□□□ -3.01
LINC00648-203ENST00000556923 SZT2Q5T011 3432 aa-3.75□□□□□ -3.01
LINC00648-203ENST00000556923 SCN11AQ9UI33 1791 aa-3.75□□□□□ -3.01
LINC00648-203ENST00000556923 COPZ1P61923 177 aa-3.75□□□□□ -3.01
LINC00648-203ENST00000556923 UBA52P62987 128 aaKnown RBP-3.75□□□□□ -3.01
LINC00648-203ENST00000556923 UBE2D4Q9Y2X8 147 aa-3.75□□□□□ -3.01
LINC00648-203ENST00000556923 CCL22O00626 93 aa-3.76□□□□□ -3.01
LINC00648-203ENST00000556923 IGLC1P0CG04 106 aa-3.76□□□□□ -3.01
LINC00648-203ENST00000556923 SMCO1Q147U7 214 aa-3.76□□□□□ -3.01
LINC00648-203ENST00000556923 TSTD1Q8NFU3 115 aa-3.76□□□□□ -3.01
LINC00648-203ENST00000556923 LSM10Q969L4 123 aaKnown RBP-3.76□□□□□ -3.01
LINC00648-203ENST00000556923 MBD5Q9P267 1494 aa-3.76□□□□□ -3.01
LINC00648-203ENST00000556923 CCDC141Q6ZP82 1450 aa-3.77□□□□□ -3.01
LINC00648-203ENST00000556923 RPS25P62851 125 aaKnown RBP-3.77□□□□□ -3.01
LINC00648-203ENST00000556923 TCEAL4Q96EI5 215 aa-3.77□□□□□ -3.01
LINC00648-203ENST00000556923 NXT2Q9NPJ8 142 aaKnown RBP-3.78□□□□□ -3.01
LINC00648-203ENST00000556923 FAIMQ9NVQ4 179 aa-3.78□□□□□ -3.01
LINC00648-203ENST00000556923 DNAH14Q0VDD8 3507 aa-3.78□□□□□ -3.02
LINC00648-203ENST00000556923 C4AP0C0L4 1744 aa-3.78□□□□□ -3.02
LINC00648-203ENST00000556923 C4BP0C0L5 1744 aa-3.78□□□□□ -3.02
LINC00648-203ENST00000556923 CFAP47Q6ZTR5 3102 aa-3.79□□□□□ -3.02
LINC00648-203ENST00000556923 A0A0G2JMZ2 1700 aa-3.8□□□□□ -3.02
LINC00648-203ENST00000556923 PDCD10Q9BUL8 212 aa-3.8□□□□□ -3.02
LINC00648-203ENST00000556923 CCDC167Q9P0B6 97 aa-3.8□□□□□ -3.02
LINC00648-203ENST00000556923 LOC400499M0QZD8 3231 aa-3.8□□□□□ -3.02
LINC00648-203ENST00000556923 DEFB106AQ8N104 65 aa-3.81□□□□□ -3.02
LINC00648-203ENST00000556923 CEP170BQ9Y4F5 1589 aaPredicted RBP-3.81□□□□□ -3.02
LINC00648-203ENST00000556923 TCHHQ07283 1943 aa-3.82□□□□□ -3.02
LINC00648-203ENST00000556923 DEFB136Q30KP8 78 aa-3.82□□□□□ -3.02
LINC00648-203ENST00000556923 FAM223AQ8IWN6 122 aa-3.82□□□□□ -3.02
LINC00648-203ENST00000556923 CFTRP13569 1480 aa-3.82□□□□□ -3.02
LINC00648-203ENST00000556923 TET3O43151 1660 aa-3.82□□□□□ -3.02
LINC00648-203ENST00000556923 LCN9Q8WX39 176 aa-3.83□□□□□ -3.02
LINC00648-203ENST00000556923 FAM167A-AS1Q96KT0 104 aa-3.83□□□□□ -3.02
LINC00648-203ENST00000556923 RGPD2P0DJD1 1756 aa-3.84□□□□□ -3.02
LINC00648-203ENST00000556923 QRICH2Q9H0J4 1663 aa-3.84□□□□□ -3.02
LINC00648-203ENST00000556923 A8MTW9 85 aa-3.84□□□□□ -3.02
LINC00648-203ENST00000556923 ZNF831Q5JPB2 1677 aa-3.84□□□□□ -3.02
LINC00648-203ENST00000556923 ASXL1Q8IXJ9 1541 aa-3.85□□□□□ -3.03
LINC00648-203ENST00000556923 CEP250Q9BV73 2442 aa-3.85□□□□□ -3.03
LINC00648-203ENST00000556923 C1orf167Q5SNV9 1468 aa-3.86□□□□□ -3.03
LINC00648-203ENST00000556923 WHAMMP3Q1A5X7 153 aa-3.86□□□□□ -3.03
LINC00648-203ENST00000556923 SMARCA2P51531 1590 aa-3.86□□□□□ -3.03
LINC00648-203ENST00000556923 CUX1P39880 1505 aa-3.86□□□□□ -3.03
LINC00648-203ENST00000556923 XRN1Q8IZH2 1706 aaKnown RBP-3.87□□□□□ -3.03
LINC00648-203ENST00000556923 CHKB-CPT1BH3BT56 60 aa-3.87□□□□□ -3.03
LINC00648-203ENST00000556923 MYOZ3Q8TDC0 251 aa-3.87□□□□□ -3.03
LINC00648-203ENST00000556923 COPS9Q8WXC6 57 aa-3.87□□□□□ -3.03
LINC00648-203ENST00000556923 SERP1Q9Y6X1 66 aa-3.87□□□□□ -3.03
LINC00648-203ENST00000556923 SPANXDQ9BXN6 97 aa-3.88□□□□□ -3.03
LINC00648-203ENST00000556923 ANKRD36A6QL64 1941 aa-3.88□□□□□ -3.03
LINC00648-203ENST00000556923 CLIP1P30622 1438 aa-3.88□□□□□ -3.03
LINC00648-203ENST00000556923 LCE6AA0A183 80 aa-3.89□□□□□ -3.03
LINC00648-203ENST00000556923 PRO1933Q9H354 126 aa-3.89□□□□□ -3.03
LINC00648-203ENST00000556923 ARL2-SNX15V9GYD0 113 aa-3.89□□□□□ -3.03
LINC00648-203ENST00000556923 CPSF1Q10570 1443 aaKnown RBP-3.89□□□□□ -3.03
LINC00648-203ENST00000556923 ANKRD36CQ5JPF3 1778 aa-3.89□□□□□ -3.03
LINC00648-203ENST00000556923 GRIN2AQ12879 1464 aa-3.9□□□□□ -3.03
LINC00648-203ENST00000556923 RERGLQ9H628 205 aa-3.9□□□□□ -3.03
LINC00648-203ENST00000556923 COPZ2Q9P299 210 aa-3.9□□□□□ -3.03
LINC00648-203ENST00000556923 ATP7BP35670 1465 aa-3.91□□□□□ -3.03
LINC00648-203ENST00000556923 NDUFA3O95167 84 aa-3.91□□□□□ -3.04
LINC00648-203ENST00000556923 DIP2CQ9Y2E4 1556 aa-3.92□□□□□ -3.04
LINC00648-203ENST00000556923 LOC100130705A0A1B0GUX0 176 aa-3.92□□□□□ -3.04
LINC00648-203ENST00000556923 LZICQ8WZA0 190 aa-3.92□□□□□ -3.04
LINC00648-203ENST00000556923 VCANP13611 3396 aa-3.92□□□□□ -3.04
LINC00648-203ENST00000556923 SHROOM2Q13796 1616 aa-3.92□□□□□ -3.04
LINC00648-203ENST00000556923 KIAA1551Q9HCM1 1747 aa-3.92□□□□□ -3.04
LINC00648-203ENST00000556923 UBE2L5PA0A1B0GUS4 154 aa-3.93□□□□□ -3.04
LINC00648-203ENST00000556923 PPP3R2Q96LZ3 170 aa-3.93□□□□□ -3.04
LINC00648-203ENST00000556923 K7EP13 123 aa-3.94□□□□□ -3.04
LINC00648-203ENST00000556923 MAST1Q9Y2H9 1570 aa-3.94□□□□□ -3.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms