RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 IGLV7-43P04211 117 aa4.5□□□□□ -1.69
SCFD1-222ENST00000556768 UBR4Q5T4S7 5183 aa4.49□□□□□ -1.69
SCFD1-222ENST00000556768 ATP5LO75964 103 aa4.49□□□□□ -1.69
SCFD1-222ENST00000556768 COX7B2Q8TF08 81 aa4.49□□□□□ -1.69
SCFD1-222ENST00000556768 XAGE1AQ9HD64 81 aa4.49□□□□□ -1.69
SCFD1-222ENST00000556768 SMIM1B2RUZ4 78 aa4.49□□□□□ -1.69
SCFD1-222ENST00000556768 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
SCFD1-222ENST00000556768 TNXBP22105 4242 aa4.48□□□□□ -1.69
SCFD1-222ENST00000556768 IGLV5-45A0A087WSX0 123 aa4.48□□□□□ -1.69
SCFD1-222ENST00000556768 HBDP02042 147 aa4.48□□□□□ -1.69
SCFD1-222ENST00000556768 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
SCFD1-222ENST00000556768 C22orf24Q9Y442 160 aa4.48□□□□□ -1.69
SCFD1-222ENST00000556768 H0Y9J4 135 aa4.47□□□□□ -1.69
SCFD1-222ENST00000556768 NUPR1O60356 82 aa4.47□□□□□ -1.69
SCFD1-222ENST00000556768 SPINK8P0C7L1 97 aa4.47□□□□□ -1.69
SCFD1-222ENST00000556768 SFTA2Q6UW10 78 aa4.47□□□□□ -1.69
SCFD1-222ENST00000556768 C18orf32Q8TCD1 76 aa4.47□□□□□ -1.69
SCFD1-222ENST00000556768 IGLV9-49A0A0B4J1Y8 123 aa4.46□□□□□ -1.69
SCFD1-222ENST00000556768 MRPL55Q7Z7F7 128 aaKnown RBP4.46□□□□□ -1.69
SCFD1-222ENST00000556768 BAGE3Q86Y29 109 aa4.46□□□□□ -1.69
SCFD1-222ENST00000556768 NKAPP1Q8N9T2 125 aa4.46□□□□□ -1.69
SCFD1-222ENST00000556768 TP73-AS1Q9UF72 201 aa4.46□□□□□ -1.69
SCFD1-222ENST00000556768 ZNF861PO60384 105 aa4.45□□□□□ -1.7
SCFD1-222ENST00000556768 IGLC3P0DOY3 106 aa4.45□□□□□ -1.7
SCFD1-222ENST00000556768 RPL13AP40429 203 aaKnown RBP4.45□□□□□ -1.7
SCFD1-222ENST00000556768 RPL28P46779 137 aaKnown RBP4.45□□□□□ -1.7
SCFD1-222ENST00000556768 TMEM170BQ5T4T1 132 aa4.45□□□□□ -1.7
SCFD1-222ENST00000556768 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
SCFD1-222ENST00000556768 IGLV1-50A0A075B6I6 118 aa4.44□□□□□ -1.7
SCFD1-222ENST00000556768 H0Y8G0 127 aa4.44□□□□□ -1.7
SCFD1-222ENST00000556768 PFN2P35080 140 aa4.44□□□□□ -1.7
SCFD1-222ENST00000556768 COX17Q14061 63 aa4.44□□□□□ -1.7
SCFD1-222ENST00000556768 PMCHL1Q16048 86 aa4.44□□□□□ -1.7
SCFD1-222ENST00000556768 CHCHD1Q96BP2 118 aaKnown RBP4.44□□□□□ -1.7
SCFD1-222ENST00000556768 KRTAP11-1Q8IUC1 163 aa4.44□□□□□ -1.7
SCFD1-222ENST00000556768 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
SCFD1-222ENST00000556768 LRP2P98164 4655 aa4.43□□□□□ -1.7
SCFD1-222ENST00000556768 RPL37AP8A6NKH3 93 aa4.43□□□□□ -1.7
SCFD1-222ENST00000556768 BCE1O60756 84 aa4.43□□□□□ -1.7
SCFD1-222ENST00000556768 HSBP1O75506 76 aa4.43□□□□□ -1.7
SCFD1-222ENST00000556768 ZNF22P17026 224 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-222ENST00000556768 LINC00167Q96N53 147 aa4.43□□□□□ -1.7
SCFD1-222ENST00000556768 CHTOPQ9Y3Y2 248 aaKnown RBP4.43□□□□□ -1.7
SCFD1-222ENST00000556768 A0A096LNJ9 63 aa4.42□□□□□ -1.7
SCFD1-222ENST00000556768 UBE2AP49459 152 aa4.42□□□□□ -1.7
SCFD1-222ENST00000556768 ERG28Q9UKR5 140 aa4.42□□□□□ -1.7
SCFD1-222ENST00000556768 IFI27L1Q96BM0 104 aa4.42□□□□□ -1.7
SCFD1-222ENST00000556768 ZNF625Q96I27 306 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-222ENST00000556768 TRAV12-1A0A0B4J245 112 aa4.41□□□□□ -1.7
SCFD1-222ENST00000556768 C11orf86A6NJI1 115 aa4.41□□□□□ -1.7
SCFD1-222ENST00000556768 LINC00587B1AMM8 73 aa4.41□□□□□ -1.7
SCFD1-222ENST00000556768 LINC00158P58513 81 aa4.41□□□□□ -1.7
SCFD1-222ENST00000556768 SND1-IT1Q9HBX3 110 aa4.41□□□□□ -1.7
SCFD1-222ENST00000556768 IGKV2-28A0A075B6P5 120 aa4.4□□□□□ -1.7
SCFD1-222ENST00000556768 IGKV2D-28P01615 120 aa4.4□□□□□ -1.7
SCFD1-222ENST00000556768 CRYGAP11844 174 aa4.39□□□□□ -1.71
SCFD1-222ENST00000556768 LEPROTL1O95214 131 aa4.39□□□□□ -1.71
SCFD1-222ENST00000556768 TRGC2P03986 189 aa4.39□□□□□ -1.71
SCFD1-222ENST00000556768 KRTAP1-4P0C5Y4 121 aa4.39□□□□□ -1.71
SCFD1-222ENST00000556768 CBLN2Q8IUK8 224 aa4.39□□□□□ -1.71
SCFD1-222ENST00000556768 LINC00518Q8N0U6 118 aa4.39□□□□□ -1.71
SCFD1-222ENST00000556768 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
SCFD1-222ENST00000556768 TMEM223A0PJW6 202 aa4.38□□□□□ -1.71
SCFD1-222ENST00000556768 S100A12P80511 92 aa4.38□□□□□ -1.71
SCFD1-222ENST00000556768 MEIG1Q5JSS6 88 aa4.38□□□□□ -1.71
SCFD1-222ENST00000556768 Q6ZVQ6 151 aa4.38□□□□□ -1.71
SCFD1-222ENST00000556768 FAM19A2Q8N3H0 131 aa4.38□□□□□ -1.71
SCFD1-222ENST00000556768 YPEL4Q96NS1 127 aa4.38□□□□□ -1.71
SCFD1-222ENST00000556768 MAP1LC3CQ9BXW4 147 aa4.38□□□□□ -1.71
SCFD1-222ENST00000556768 HSPB8Q9UJY1 196 aa4.38□□□□□ -1.71
SCFD1-222ENST00000556768 MYMXA0A1B0GTQ4 84 aa4.37□□□□□ -1.71
SCFD1-222ENST00000556768 PLNP26678 52 aa4.37□□□□□ -1.71
SCFD1-222ENST00000556768 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
SCFD1-222ENST00000556768 FAM19A1Q7Z5A9 133 aa4.37□□□□□ -1.71
SCFD1-222ENST00000556768 TYMSOSQ8TAI1 123 aa4.37□□□□□ -1.71
SCFD1-222ENST00000556768 TMEM126AQ9H061 195 aa4.37□□□□□ -1.71
SCFD1-222ENST00000556768 IGKV2D-26A0A0A0MRZ7 120 aa4.36□□□□□ -1.71
SCFD1-222ENST00000556768 M0R378 163 aa4.36□□□□□ -1.71
SCFD1-222ENST00000556768 HERVK_113P61574 105 aa4.36□□□□□ -1.71
SCFD1-222ENST00000556768 PRR4Q16378 134 aa4.36□□□□□ -1.71
SCFD1-222ENST00000556768 BOD1L2Q8IYS8 172 aa4.36□□□□□ -1.71
SCFD1-222ENST00000556768 NDUFA12Q9UI09 145 aa4.36□□□□□ -1.71
SCFD1-222ENST00000556768 SCO1O75880 301 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 SERF1AO75920 110 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 SMIM13P0DJ93 91 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 SLC7A5P1Q8MH63 180 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 TMEM238C9JI98 176 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 DPM2O94777 84 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 TSPAN13O95857 204 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 FABP4P15090 132 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 PRLHP81277 87 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 FAM229BQ4G0N7 80 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 MIR7-3HGQ8N6C7 128 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 PLEKHB2Q96CS7 222 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 MIEN1Q9BRT3 115 aa4.35□□□□□ -1.71
SCFD1-222ENST00000556768 HIGD2AQ9BW72 106 aa4.34□□□□□ -1.71
SCFD1-222ENST00000556768 A0A087X002 238 aa4.33□□□□□ -1.72
SCFD1-222ENST00000556768 LGALS3P17931 250 aaKnown RBP4.33□□□□□ -1.72
SCFD1-222ENST00000556768 NMUP48645 174 aa4.33□□□□□ -1.72
SCFD1-222ENST00000556768 KRTAP13-1Q8IUC0 172 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms