RNA–Protein interactions for RNA: ENST00000556401.2

SUB1P2-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 2, humanhuman

BASIC

Gene SUB1P2, Length 297 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P2-201ENST00000556401 MARF1Q9Y4F3 1742 aaKnown RBP-0.36□□□□□ -2.47
SUB1P2-201ENST00000556401 TEX14Q8IWB6 1497 aa-0.36□□□□□ -2.47
SUB1P2-201ENST00000556401 VPS13DQ5THJ4 4388 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 ABCC2Q92887 1545 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 PTPN23Q9H3S7 1636 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 KIAA1551Q9HCM1 1747 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 FMN2Q9NZ56 1722 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 TRAV30A0A087WSZ9 112 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 ARMS2P0C7Q2 107 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 S100PP25815 95 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 ASIPP42127 132 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 HMGN3Q15651 99 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 SERP2Q8N6R1 65 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 VAMP8Q9BV40 100 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 EPG5Q9HCE0 2579 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 RAPGEF2Q9Y4G8 1499 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 ADAMTS12P58397 1594 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 SHPRHQ149N8 1683 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 SONP18583 2426 aaKnown RBP-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 AKAP13Q12802 2813 aa-0.37□□□□□ -2.47
SUB1P2-201ENST00000556401 STARD9Q9P2P6 4700 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 HERC2O95714 4834 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 DOPEY1Q5JWR5 2465 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 CUX1P39880 1505 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 PCLOQ9Y6V0 5065 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 DNAH9Q9NYC9 4486 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 TRBV7-7A0A0K0K1E9 115 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 TMEM218A2RU14 115 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 I3L3M4 83 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 CCL22O00626 93 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 GNGT2O14610 69 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 LELP1Q5T871 98 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 ALKAL2Q6UX46 152 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 DEFB107AQ8IZN7 70 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 TRANK1O15050 2925 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 MXRA5Q9NR99 2828 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 EPRSP07814 1512 aaKnown RBP-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 CLIP1P30622 1438 aa-0.38□□□□□ -2.47
SUB1P2-201ENST00000556401 HTTP42858 3142 aa-0.39□□□□□ -2.47
SUB1P2-201ENST00000556401 HECTD1Q9ULT8 2610 aa-0.39□□□□□ -2.47
SUB1P2-201ENST00000556401 FYCO1Q9BQS8 1478 aa-0.39□□□□□ -2.47
SUB1P2-201ENST00000556401 ATOX1O00244 68 aa-0.39□□□□□ -2.47
SUB1P2-201ENST00000556401 UQCRHP07919 91 aa-0.39□□□□□ -2.47
SUB1P2-201ENST00000556401 GNGT1P63211 74 aa-0.39□□□□□ -2.47
SUB1P2-201ENST00000556401 PMCHL2Q9BQD1 86 aa-0.39□□□□□ -2.47
SUB1P2-201ENST00000556401 UBE2D4Q9Y2X8 147 aa-0.39□□□□□ -2.47
SUB1P2-201ENST00000556401 FANCAO15360 1455 aa-0.4□□□□□ -2.47
SUB1P2-201ENST00000556401 MAGI2Q86UL8 1455 aa-0.4□□□□□ -2.47
SUB1P2-201ENST00000556401 ABCA3Q99758 1704 aa-0.4□□□□□ -2.47
SUB1P2-201ENST00000556401 ACBD7Q8N6N7 88 aa-0.4□□□□□ -2.47
SUB1P2-201ENST00000556401 TCEAL7Q9BRU2 100 aa-0.4□□□□□ -2.47
SUB1P2-201ENST00000556401 PSENENQ9NZ42 101 aa-0.4□□□□□ -2.47
SUB1P2-201ENST00000556401 CNTLNQ9NXG0 1405 aa-0.4□□□□□ -2.47
SUB1P2-201ENST00000556401 TCHHQ07283 1943 aa-0.4□□□□□ -2.47
SUB1P2-201ENST00000556401 MUC17Q685J3 4493 aa-0.4□□□□□ -2.47
SUB1P2-201ENST00000556401 DNAH3Q8TD57 4116 aa-0.4□□□□□ -2.47
SUB1P2-201ENST00000556401 KNDC1Q76NI1 1749 aa-0.41□□□□□ -2.47
SUB1P2-201ENST00000556401 NBPF19A0A087WUL8 3843 aa-0.41□□□□□ -2.47
SUB1P2-201ENST00000556401 CICQ96RK0 1608 aaPredicted RBP-0.41□□□□□ -2.47
SUB1P2-201ENST00000556401 SPTY2D1-AS1A0A0U1RR47 76 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 MT1AP04731 61 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 LINC00032P0C843 101 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 IGLC2P0DOY2 106 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 IGLC3P0DOY3 106 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 RBP2P50120 134 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 DEFB112Q30KQ8 113 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 COX6B2Q6YFQ2 88 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 SPRR2FQ96RM1 72 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 DPY30Q9C005 99 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 HIGD1BQ9P298 99 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 CDKN2A-AS1Q9UH64 79 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 SPTBN4Q9H254 2564 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 KNL1Q8NG31 2342 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 VPS8Q8N3P4 1428 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 PRRC2CQ9Y520 2896 aaKnown RBP-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 PEG3Q9GZU2 1588 aa-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 PDCD11Q14690 1871 aaKnown RBP-0.41□□□□□ -2.48
SUB1P2-201ENST00000556401 TNRC18O15417 2968 aaPredicted RBP-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 USH2AO75445 5202 aa-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 TACC2O95359 2948 aa-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 NBASA2RRP1 2371 aa-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 AKAP9Q99996 3911 aa-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 F8WEM9 126 aa-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 S100A10P60903 97 aa-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 ETDBQ3ZM63 59 aa-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 WFDC13Q8IUB5 93 aa-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 AP4S1Q9Y587 144 aa-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 TROQ12816 1431 aaPredicted RBP-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 CUBNO60494 3623 aa-0.42□□□□□ -2.48
SUB1P2-201ENST00000556401 C5P01031 1676 aa-0.43□□□□□ -2.48
SUB1P2-201ENST00000556401 TEP1Q99973 2627 aaKnown RBP-0.43□□□□□ -2.48
SUB1P2-201ENST00000556401 PKHD1L1Q86WI1 4243 aa-0.43□□□□□ -2.48
SUB1P2-201ENST00000556401 D6R8Y8 96 aa-0.43□□□□□ -2.48
SUB1P2-201ENST00000556401 ATP6V1G2-DDX39BF2Z307 99 aa-0.43□□□□□ -2.48
SUB1P2-201ENST00000556401 MT4P47944 62 aa-0.43□□□□□ -2.48
SUB1P2-201ENST00000556401 KRTAP20-2Q3LI61 65 aa-0.43□□□□□ -2.48
SUB1P2-201ENST00000556401 ZNF720Q7Z2F6 126 aa-0.43□□□□□ -2.48
SUB1P2-201ENST00000556401 MUSTN1Q8IVN3 82 aa-0.43□□□□□ -2.48
SUB1P2-201ENST00000556401 SPG11Q96JI7 2443 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms