RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 A0A087WZ39 114 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 IGKV3OR2-268A0A0C4DH90 116 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 IBA57-AS1B1ANH7 110 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 C9JAW5 83 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 PSCAO43653 123 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 SCGB1A1P11684 91 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 RPL13AP40429 203 aaKnown RBP6.6□□□□□ -1.35
PSEN1-213ENST00000555386 SIGMAR1Q99720 223 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 PKD1P98161 4303 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 TRBV10-2A0A0K0K1G8 114 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 CRPP02741 224 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 NPC2P61916 151 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 LINC00269Q8N2A0 174 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 ANKRD29Q8N6D5 301 aa6.6□□□□□ -1.35
PSEN1-213ENST00000555386 HECTD4Q9Y4D8 3996 aa6.59□□□□□ -1.35
PSEN1-213ENST00000555386 IGKV2D-24A0A075B6R9 120 aa6.59□□□□□ -1.36
PSEN1-213ENST00000555386 LINC00959A0A1B0GUT2 108 aa6.59□□□□□ -1.36
PSEN1-213ENST00000555386 H3BT86 120 aa6.59□□□□□ -1.36
PSEN1-213ENST00000555386 LST1O00453 97 aa6.59□□□□□ -1.36
PSEN1-213ENST00000555386 DAND5Q8N907 189 aa6.59□□□□□ -1.36
PSEN1-213ENST00000555386 SS18Q15532 418 aa6.58□□□□□ -1.36
PSEN1-213ENST00000555386 SOSTDC1Q6X4U4 206 aa6.58□□□□□ -1.36
PSEN1-213ENST00000555386 LINC00336Q6ZUF6 198 aa6.58□□□□□ -1.36
PSEN1-213ENST00000555386 CARD19Q96LW7 228 aa6.58□□□□□ -1.36
PSEN1-213ENST00000555386 IGLV10-54A0A075B6I4 117 aa6.57□□□□□ -1.36
PSEN1-213ENST00000555386 TRAV13-2A0A0B4J235 113 aa6.57□□□□□ -1.36
PSEN1-213ENST00000555386 LECT2O14960 151 aa6.57□□□□□ -1.36
PSEN1-213ENST00000555386 ENHOQ6UWT2 76 aa6.57□□□□□ -1.36
PSEN1-213ENST00000555386 Q6ZRN7 208 aaPredicted RBP6.57□□□□□ -1.36
PSEN1-213ENST00000555386 COX7A2LO14548 114 aa6.56□□□□□ -1.36
PSEN1-213ENST00000555386 FUSP35637 526 aaKnown RBP eCLIP6.56□□□□□ -1.36
PSEN1-213ENST00000555386 DNAH5Q8TE73 4624 aa6.56□□□□□ -1.36
PSEN1-213ENST00000555386 REG3AQ06141 175 aa6.55□□□□□ -1.36
PSEN1-213ENST00000555386 Q8IZM0 81 aa6.55□□□□□ -1.36
PSEN1-213ENST00000555386 C1orf43Q9BWL3 253 aa6.55□□□□□ -1.36
PSEN1-213ENST00000555386 DYNC1H1Q14204 4646 aaKnown RBP6.55□□□□□ -1.36
PSEN1-213ENST00000555386 A0A0U1RRA0 63 aa6.54□□□□□ -1.36
PSEN1-213ENST00000555386 C2orf82Q6UX34 121 aa6.54□□□□□ -1.36
PSEN1-213ENST00000555386 RMI2Q96E14 147 aa6.54□□□□□ -1.36
PSEN1-213ENST00000555386 TOMM7Q9P0U1 55 aa6.54□□□□□ -1.36
PSEN1-213ENST00000555386 TRACP01848 142 aa6.53□□□□□ -1.36
PSEN1-213ENST00000555386 CXCL5P42830 114 aa6.53□□□□□ -1.36
PSEN1-213ENST00000555386 C5orf38Q86SI9 138 aa6.53□□□□□ -1.36
PSEN1-213ENST00000555386 MIR7-3HGQ8N6C7 128 aa6.53□□□□□ -1.36
PSEN1-213ENST00000555386 CLEC2BQ92478 149 aa6.53□□□□□ -1.36
PSEN1-213ENST00000555386 RPL28P46779 137 aaKnown RBP6.53□□□□□ -1.36
PSEN1-213ENST00000555386 LINC00158P58513 81 aa6.53□□□□□ -1.36
PSEN1-213ENST00000555386 C6orf226Q5I0X4 101 aa6.53□□□□□ -1.36
PSEN1-213ENST00000555386 CD164L2Q6UWJ8 174 aa6.53□□□□□ -1.36
PSEN1-213ENST00000555386 NTN5Q8WTR8 489 aaPredicted RBP6.53□□□□□ -1.36
PSEN1-213ENST00000555386 SND1-IT1Q9HBX3 110 aa6.53□□□□□ -1.36
PSEN1-213ENST00000555386 PRR34Q9NV39 138 aa6.53□□□□□ -1.36
PSEN1-213ENST00000555386 BIRC6Q9NR09 4857 aa6.52□□□□□ -1.37
PSEN1-213ENST00000555386 A0A087WTM6 91 aa6.52□□□□□ -1.37
PSEN1-213ENST00000555386 XCL1P47992 114 aa6.52□□□□□ -1.37
PSEN1-213ENST00000555386 A0A1B0GVY2 172 aa6.51□□□□□ -1.37
PSEN1-213ENST00000555386 KRTAP10-2P60368 255 aa6.51□□□□□ -1.37
PSEN1-213ENST00000555386 COX17Q14061 63 aa6.51□□□□□ -1.37
PSEN1-213ENST00000555386 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-213ENST00000555386 LRCOL1A6NCL2 159 aa6.5□□□□□ -1.37
PSEN1-213ENST00000555386 CHCHD10Q8WYQ3 142 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-213ENST00000555386 LRP1BQ9NZR2 4599 aa6.49□□□□□ -1.37
PSEN1-213ENST00000555386 IGKV2-28A0A075B6P5 120 aa6.49□□□□□ -1.37
PSEN1-213ENST00000555386 TRAV8-4A0A0B4J246 113 aa6.49□□□□□ -1.37
PSEN1-213ENST00000555386 TEX49A0A1B0GTD5 131 aa6.49□□□□□ -1.37
PSEN1-213ENST00000555386 FAM240AA0A1B0GVK7 77 aa6.49□□□□□ -1.37
PSEN1-213ENST00000555386 H0YGX0 51 aa6.49□□□□□ -1.37
PSEN1-213ENST00000555386 IGKV2D-28P01615 120 aa6.49□□□□□ -1.37
PSEN1-213ENST00000555386 LINC00337Q8N6G1 96 aa6.49□□□□□ -1.37
PSEN1-213ENST00000555386 C16orf90A8MZG2 172 aa6.48□□□□□ -1.37
PSEN1-213ENST00000555386 USP17L23D6RBM5 183 aa6.48□□□□□ -1.37
PSEN1-213ENST00000555386 CKS1BP61024 79 aa6.48□□□□□ -1.37
PSEN1-213ENST00000555386 CFAP161Q6P656 301 aa6.48□□□□□ -1.37
PSEN1-213ENST00000555386 PFN2P35080 140 aa6.47□□□□□ -1.37
PSEN1-213ENST00000555386 KIAA0087Q14695 138 aa6.47□□□□□ -1.37
PSEN1-213ENST00000555386 KRTAP26-1Q6PEX3 210 aa6.47□□□□□ -1.37
PSEN1-213ENST00000555386 Q8N814 137 aa6.47□□□□□ -1.37
PSEN1-213ENST00000555386 NDUFC2O95298 119 aa6.47□□□□□ -1.37
PSEN1-213ENST00000555386 MALP21145 153 aa6.47□□□□□ -1.37
PSEN1-213ENST00000555386 XGP55808 180 aa6.47□□□□□ -1.37
PSEN1-213ENST00000555386 IGLV5-52A0A0A0MRZ9 124 aa6.46□□□□□ -1.38
PSEN1-213ENST00000555386 ACYP1P07311 99 aa6.46□□□□□ -1.38
PSEN1-213ENST00000555386 SMIM11BQ8TCY0 68 aa6.46□□□□□ -1.38
PSEN1-213ENST00000555386 MT-ATP8P03928 68 aa6.45□□□□□ -1.38
PSEN1-213ENST00000555386 HIGD2BQ4VC39 106 aa6.45□□□□□ -1.38
PSEN1-213ENST00000555386 BAALC-AS2P0C853 105 aa6.44□□□□□ -1.38
PSEN1-213ENST00000555386 FAM218AQ96MZ4 157 aa6.44□□□□□ -1.38
PSEN1-213ENST00000555386 APOBP04114 4563 aaKnown RBP6.43□□□□□ -1.38
PSEN1-213ENST00000555386 A0A1B0GX51 115 aa6.43□□□□□ -1.38
PSEN1-213ENST00000555386 DNAL4O96015 105 aa6.43□□□□□ -1.38
PSEN1-213ENST00000555386 INAFM2P0DMQ5 153 aa6.43□□□□□ -1.38
PSEN1-213ENST00000555386 C14orf177Q52M58 125 aa6.43□□□□□ -1.38
PSEN1-213ENST00000555386 LINC00526Q96FQ7 95 aa6.43□□□□□ -1.38
PSEN1-213ENST00000555386 A0A1B0GV72 72 aa6.42□□□□□ -1.38
PSEN1-213ENST00000555386 SNCGO76070 127 aa6.42□□□□□ -1.38
PSEN1-213ENST00000555386 Q6Q795 121 aa6.42□□□□□ -1.38
PSEN1-213ENST00000555386 KIAA1109Q2LD37 5005 aa6.42□□□□□ -1.38
PSEN1-213ENST00000555386 DNAH8Q96JB1 4490 aa6.42□□□□□ -1.38
PSEN1-213ENST00000555386 GVQW2A0A096LPI5 108 aaPredicted RBP6.41□□□□□ -1.38
PSEN1-213ENST00000555386 SPAG11BQ08648 103 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms