RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 C6orf99Q4VX62 202 aa10.75□□□□□ -0.69
SYNE3-203ENST00000554873 NIPBLQ6KC79 2804 aaeCLIP10.75□□□□□ -0.69
SYNE3-203ENST00000554873 CCL24O00175 119 aa10.75□□□□□ -0.69
SYNE3-203ENST00000554873 SCXQ7RTU7 201 aa10.74□□□□□ -0.69
SYNE3-203ENST00000554873 TRGV2A0A075B6R0 118 aa10.73□□□□□ -0.69
SYNE3-203ENST00000554873 SETXQ7Z333 2677 aaKnown RBP10.73□□□□□ -0.69
SYNE3-203ENST00000554873 PLA2G2AP14555 144 aa10.73□□□□□ -0.69
SYNE3-203ENST00000554873 PRB1P04280 392 aa10.72□□□□□ -0.69
SYNE3-203ENST00000554873 DEFB113Q30KQ7 82 aa10.72□□□□□ -0.69
SYNE3-203ENST00000554873 BBC3Q96PG8 261 aaPredicted RBP10.72□□□□□ -0.69
SYNE3-203ENST00000554873 IGLV4-60A0A075B6I1 120 aa10.71□□□□□ -0.69
SYNE3-203ENST00000554873 NBPF19A0A087WUL8 3843 aa10.71□□□□□ -0.69
SYNE3-203ENST00000554873 WFDC10AQ9H1F0 79 aa10.71□□□□□ -0.69
SYNE3-203ENST00000554873 MUC7Q8TAX7 377 aa10.71□□□□□ -0.69
SYNE3-203ENST00000554873 CD164Q04900 197 aa10.7□□□□□ -0.7
SYNE3-203ENST00000554873 H3BQ85 93 aa10.7□□□□□ -0.7
SYNE3-203ENST00000554873 C16orf74Q96GX8 76 aa10.7□□□□□ -0.7
SYNE3-203ENST00000554873 Q1T7F1 81 aa10.69□□□□□ -0.7
SYNE3-203ENST00000554873 SPATA3Q8NHX4 192 aa10.69□□□□□ -0.7
SYNE3-203ENST00000554873 OCR1Q9BZK8 76 aa10.69□□□□□ -0.7
SYNE3-203ENST00000554873 TRGV4A0A0C4DH28 118 aa10.69□□□□□ -0.7
SYNE3-203ENST00000554873 DNAJC9-AS1A6NH13 148 aa10.68□□□□□ -0.7
SYNE3-203ENST00000554873 hDV103S1A0JD37 113 aa10.67□□□□□ -0.7
SYNE3-203ENST00000554873 DAD1P61803 113 aa10.67□□□□□ -0.7
SYNE3-203ENST00000554873 Q8IZM0 81 aa10.67□□□□□ -0.7
SYNE3-203ENST00000554873 TRBV6-8A0A0A6YYG3 113 aa10.67□□□□□ -0.7
SYNE3-203ENST00000554873 KRTAP1-3Q8IUG1 177 aa10.66□□□□□ -0.7
SYNE3-203ENST00000554873 CCDC168Q8NDH2 2452 aa10.66□□□□□ -0.7
SYNE3-203ENST00000554873 CSNK1G2-AS1Q8NCQ2 148 aa10.66□□□□□ -0.7
SYNE3-203ENST00000554873 ESM1Q9NQ30 184 aa10.66□□□□□ -0.7
SYNE3-203ENST00000554873 ITPR3Q14573 2671 aa10.66□□□□□ -0.7
SYNE3-203ENST00000554873 C19orf73Q9NVV2 129 aa10.66□□□□□ -0.7
SYNE3-203ENST00000554873 LINC00959A0A1B0GUT2 108 aa10.65□□□□□ -0.71
SYNE3-203ENST00000554873 CD164L2Q6UWJ8 174 aa10.65□□□□□ -0.71
SYNE3-203ENST00000554873 Q6ZRP5 223 aa10.65□□□□□ -0.71
SYNE3-203ENST00000554873 Q6ZQY7 126 aa10.64□□□□□ -0.71
SYNE3-203ENST00000554873 HIGD2AQ9BW72 106 aa10.64□□□□□ -0.71
SYNE3-203ENST00000554873 APCP25054 2843 aa10.64□□□□□ -0.71
SYNE3-203ENST00000554873 CMC4P56277 68 aaPredicted RBP10.64□□□□□ -0.71
SYNE3-203ENST00000554873 COX17Q14061 63 aa10.64□□□□□ -0.71
SYNE3-203ENST00000554873 UBR5O95071 2799 aaPredicted RBP10.64□□□□□ -0.71
SYNE3-203ENST00000554873 RETNQ9HD89 108 aa10.63□□□□□ -0.71
SYNE3-203ENST00000554873 IGKV4-1P06312 121 aa10.62□□□□□ -0.71
SYNE3-203ENST00000554873 FN1P02751 2386 aaKnown RBP10.61□□□□□ -0.71
SYNE3-203ENST00000554873 IGLV1-51P01701 117 aa10.61□□□□□ -0.71
SYNE3-203ENST00000554873 USP24Q9UPU5 2620 aa10.61□□□□□ -0.71
SYNE3-203ENST00000554873 Q8N9L7 120 aa10.6□□□□□ -0.71
SYNE3-203ENST00000554873 LINC01006Q8NI28 216 aa10.59□□□□□ -0.71
SYNE3-203ENST00000554873 LRCOL1A6NCL2 159 aa10.59□□□□□ -0.71
SYNE3-203ENST00000554873 FLNAP21333 2647 aaKnown RBP10.59□□□□□ -0.71
SYNE3-203ENST00000554873 Q8NDZ9 215 aa10.59□□□□□ -0.71
SYNE3-203ENST00000554873 DEFB130BP0DP73 79 aa10.58□□□□□ -0.72
SYNE3-203ENST00000554873 DEFB130AP0DP74 79 aa10.58□□□□□ -0.72
SYNE3-203ENST00000554873 C1orf64Q8NEQ6 169 aa10.58□□□□□ -0.72
SYNE3-203ENST00000554873 PSPHP1O15172 72 aa10.57□□□□□ -0.72
SYNE3-203ENST00000554873 COX7BP24311 80 aa10.56□□□□□ -0.72
SYNE3-203ENST00000554873 MTORP42345 2549 aa10.55□□□□□ -0.72
SYNE3-203ENST00000554873 ACANP16112 2415 aa10.55□□□□□ -0.72
SYNE3-203ENST00000554873 TRAV22A0A0B4J277 110 aa10.55□□□□□ -0.72
SYNE3-203ENST00000554873 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.55□□□□□ -0.72
SYNE3-203ENST00000554873 GYPEP15421 78 aa10.54□□□□□ -0.72
SYNE3-203ENST00000554873 IGHV4-28A0A0C4DH34 117 aa10.54□□□□□ -0.72
SYNE3-203ENST00000554873 IGLV6-57P01721 117 aa10.54□□□□□ -0.72
SYNE3-203ENST00000554873 KIAA0087Q14695 138 aa10.54□□□□□ -0.72
SYNE3-203ENST00000554873 CLPSL2Q6UWE3 100 aa10.53□□□□□ -0.72
SYNE3-203ENST00000554873 MRPL55Q7Z7F7 128 aaKnown RBP10.53□□□□□ -0.72
SYNE3-203ENST00000554873 C9orf116Q5BN46 136 aaPredicted RBP10.53□□□□□ -0.72
SYNE3-203ENST00000554873 A0A1B0GUV1 79 aa10.52□□□□□ -0.73
SYNE3-203ENST00000554873 LCE6AA0A183 80 aa10.51□□□□□ -0.73
SYNE3-203ENST00000554873 NBEAL2Q6ZNJ1 2754 aa10.51□□□□□ -0.73
SYNE3-203ENST00000554873 A0A096LPF7 62 aa10.51□□□□□ -0.73
SYNE3-203ENST00000554873 LINC00612Q8N6U2 182 aa10.5□□□□□ -0.73
SYNE3-203ENST00000554873 GCN1Q92616 2671 aaKnown RBP10.49□□□□□ -0.73
SYNE3-203ENST00000554873 DIRC1Q969H9 104 aa10.49□□□□□ -0.73
SYNE3-203ENST00000554873 LINC00269Q8N2A0 174 aa10.48□□□□□ -0.73
SYNE3-203ENST00000554873 FAM30AQ9NZY2 134 aa10.48□□□□□ -0.73
SYNE3-203ENST00000554873 LYRM9A8MSI8 78 aa10.47□□□□□ -0.73
SYNE3-203ENST00000554873 SYCNQ0VAF6 134 aa10.47□□□□□ -0.73
SYNE3-203ENST00000554873 KRTAP1-1Q07627 177 aa10.46□□□□□ -0.73
SYNE3-203ENST00000554873 ZCCHC13Q8WW36 166 aaKnown RBP10.46□□□□□ -0.73
SYNE3-203ENST00000554873 CYP4F30PQ9H0H9 118 aa10.46□□□□□ -0.73
SYNE3-203ENST00000554873 PRO0255Q9UI72 69 aa10.46□□□□□ -0.73
SYNE3-203ENST00000554873 UBE2BP63146 152 aa10.46□□□□□ -0.74
SYNE3-203ENST00000554873 SMIM29Q86T20 159 aa10.46□□□□□ -0.74
SYNE3-203ENST00000554873 CELA1Q9UNI1 258 aa10.46□□□□□ -0.74
SYNE3-203ENST00000554873 X6R8D5 127 aa10.46□□□□□ -0.74
SYNE3-203ENST00000554873 KTN1-AS1Q86SY8 53 aa10.45□□□□□ -0.74
SYNE3-203ENST00000554873 A8MUN3 132 aa10.45□□□□□ -0.74
SYNE3-203ENST00000554873 PSCAO43653 123 aa10.45□□□□□ -0.74
SYNE3-203ENST00000554873 ANK3Q12955 4377 aaKnown RBP10.44□□□□□ -0.74
SYNE3-203ENST00000554873 IGLV10-54A0A075B6I4 117 aa10.43□□□□□ -0.74
SYNE3-203ENST00000554873 HIGD2BQ4VC39 106 aa10.43□□□□□ -0.74
SYNE3-203ENST00000554873 C10orf25Q5T742 122 aa10.43□□□□□ -0.74
SYNE3-203ENST00000554873 CHCHD10Q8WYQ3 142 aaPredicted RBP10.43□□□□□ -0.74
SYNE3-203ENST00000554873 IGHV4-30-4P0DP06 118 aa10.43□□□□□ -0.74
SYNE3-203ENST00000554873 RBM12B-AS1Q9P1G2 102 aa10.43□□□□□ -0.74
SYNE3-203ENST00000554873 LINC00588Q9Y4M8 146 aa10.43□□□□□ -0.74
SYNE3-203ENST00000554873 ZNF73O43830 326 aaPredicted RBP10.42□□□□□ -0.74
SYNE3-203ENST00000554873 ELOF1P60002 83 aaKnown RBP10.42□□□□□ -0.74
SYNE3-203ENST00000554873 KLK12Q9UKR0 248 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms