RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 WFDC9Q8NEX5 89 aa6.53□□□□□ -1.36
SYNE2-213ENST00000554805 PKD1L1Q8TDX9 2849 aa6.53□□□□□ -1.36
SYNE2-213ENST00000554805 CCKP06307 115 aa6.53□□□□□ -1.36
SYNE2-213ENST00000554805 KLK12Q9UKR0 248 aa6.53□□□□□ -1.36
SYNE2-213ENST00000554805 IGHV4-28A0A0C4DH34 117 aa6.52□□□□□ -1.37
SYNE2-213ENST00000554805 LYRM9A8MSI8 78 aa6.52□□□□□ -1.37
SYNE2-213ENST00000554805 USP17L23D6RBM5 183 aa6.52□□□□□ -1.37
SYNE2-213ENST00000554805 KRTAP10-3P60369 221 aa6.52□□□□□ -1.37
SYNE2-213ENST00000554805 KIAA0087Q14695 138 aa6.52□□□□□ -1.37
SYNE2-213ENST00000554805 NANOS2P60321 138 aaKnown RBP6.51□□□□□ -1.37
SYNE2-213ENST00000554805 LINC00612Q8N6U2 182 aa6.51□□□□□ -1.37
SYNE2-213ENST00000554805 C10orf25Q5T742 122 aa6.51□□□□□ -1.37
SYNE2-213ENST00000554805 OBSCN-AS1Q96MR7 158 aa6.51□□□□□ -1.37
SYNE2-213ENST00000554805 UBL5Q9BZL1 73 aa6.51□□□□□ -1.37
SYNE2-213ENST00000554805 C5orf47Q569G3 176 aa6.51□□□□□ -1.37
SYNE2-213ENST00000554805 APOC4P55056 127 aa6.5□□□□□ -1.37
SYNE2-213ENST00000554805 COX17Q14061 63 aa6.5□□□□□ -1.37
SYNE2-213ENST00000554805 C9orf66Q5T8R8 295 aa6.5□□□□□ -1.37
SYNE2-213ENST00000554805 LINC01561Q8N1V8 128 aa6.5□□□□□ -1.37
SYNE2-213ENST00000554805 TRAV23DV6A0A075B6W5 121 aa6.5□□□□□ -1.37
SYNE2-213ENST00000554805 NDUFC2O95298 119 aa6.5□□□□□ -1.37
SYNE2-213ENST00000554805 SPATA3Q8NHX4 192 aa6.5□□□□□ -1.37
SYNE2-213ENST00000554805 ENHOQ6UWT2 76 aa6.49□□□□□ -1.37
SYNE2-213ENST00000554805 CELA1Q9UNI1 258 aa6.49□□□□□ -1.37
SYNE2-213ENST00000554805 CYSRT1A8MQ03 144 aa6.49□□□□□ -1.37
SYNE2-213ENST00000554805 XAGE1AQ9HD64 81 aa6.49□□□□□ -1.37
SYNE2-213ENST00000554805 RBM3P98179 157 aaKnown RBP6.49□□□□□ -1.37
SYNE2-213ENST00000554805 SERP2Q8N6R1 65 aa6.49□□□□□ -1.37
SYNE2-213ENST00000554805 HAMPP81172 84 aa6.48□□□□□ -1.37
SYNE2-213ENST00000554805 FAM19A1Q7Z5A9 133 aa6.48□□□□□ -1.37
SYNE2-213ENST00000554805 LOC107984640A0A0U1RRK4 108 aa6.48□□□□□ -1.37
SYNE2-213ENST00000554805 SPART-AS1P0CW21 52 aa6.48□□□□□ -1.37
SYNE2-213ENST00000554805 C2orf48Q96LS8 159 aa6.48□□□□□ -1.37
SYNE2-213ENST00000554805 GHRHP01286 108 aa6.48□□□□□ -1.37
SYNE2-213ENST00000554805 Q8NDZ9 215 aa6.48□□□□□ -1.37
SYNE2-213ENST00000554805 LINC00575Q6W349 94 aa6.47□□□□□ -1.37
SYNE2-213ENST00000554805 Q6ZQY7 126 aa6.46□□□□□ -1.37
SYNE2-213ENST00000554805 CRYGAP11844 174 aa6.46□□□□□ -1.38
SYNE2-213ENST00000554805 DSCR8Q96T75 97 aa6.46□□□□□ -1.38
SYNE2-213ENST00000554805 HIGD2BQ4VC39 106 aa6.46□□□□□ -1.38
SYNE2-213ENST00000554805 LELP1Q5T871 98 aa6.46□□□□□ -1.38
SYNE2-213ENST00000554805 LINC00167Q96N53 147 aa6.45□□□□□ -1.38
SYNE2-213ENST00000554805 UPK3BQ9BT76 320 aa6.45□□□□□ -1.38
SYNE2-213ENST00000554805 J3KT08 172 aa6.45□□□□□ -1.38
SYNE2-213ENST00000554805 ZNF561-AS1K7EIQ3 104 aa6.45□□□□□ -1.38
SYNE2-213ENST00000554805 TRBV10-3A0A0K0K1G6 114 aa6.44□□□□□ -1.38
SYNE2-213ENST00000554805 DIRC1Q969H9 104 aa6.44□□□□□ -1.38
SYNE2-213ENST00000554805 CYSTM1Q9H1C7 97 aa6.44□□□□□ -1.38
SYNE2-213ENST00000554805 MIFP14174 115 aa6.44□□□□□ -1.38
SYNE2-213ENST00000554805 ATP5EP2Q5VTU8 51 aa6.44□□□□□ -1.38
SYNE2-213ENST00000554805 F8WDY8 70 aa6.43□□□□□ -1.38
SYNE2-213ENST00000554805 CAMK2N2Q96S95 79 aa6.43□□□□□ -1.38
SYNE2-213ENST00000554805 ANK3Q12955 4377 aaKnown RBP6.43□□□□□ -1.38
SYNE2-213ENST00000554805 Q8NAQ8 132 aa6.42□□□□□ -1.38
SYNE2-213ENST00000554805 PRB2P02812 416 aaPredicted RBP6.42□□□□□ -1.38
SYNE2-213ENST00000554805 COX7BP24311 80 aa6.42□□□□□ -1.38
SYNE2-213ENST00000554805 C20orf197Q8N268 126 aa6.42□□□□□ -1.38
SYNE2-213ENST00000554805 C6orf48Q9UBA6 75 aa6.41□□□□□ -1.38
SYNE2-213ENST00000554805 M0R2N4 97 aa6.41□□□□□ -1.38
SYNE2-213ENST00000554805 Q6ZQT0 140 aa6.41□□□□□ -1.38
SYNE2-213ENST00000554805 SCXQ7RTU7 201 aa6.41□□□□□ -1.38
SYNE2-213ENST00000554805 IGHV4-30-4P0DP06 118 aa6.41□□□□□ -1.38
SYNE2-213ENST00000554805 A0A0J9YWU9 116 aa6.4□□□□□ -1.38
SYNE2-213ENST00000554805 ZNF73O43830 326 aaPredicted RBP6.4□□□□□ -1.39
SYNE2-213ENST00000554805 BCE1O60756 84 aa6.4□□□□□ -1.39
SYNE2-213ENST00000554805 OXLD1Q5BKU9 147 aa6.4□□□□□ -1.39
SYNE2-213ENST00000554805 LYPD5Q6UWN5 251 aa6.4□□□□□ -1.39
SYNE2-213ENST00000554805 IGLV6-57P01721 117 aa6.4□□□□□ -1.39
SYNE2-213ENST00000554805 TMEM258P61165 79 aa6.4□□□□□ -1.39
SYNE2-213ENST00000554805 FAM19A5Q7Z5A7 132 aaPredicted RBP6.39□□□□□ -1.39
SYNE2-213ENST00000554805 Q6ZVQ6 151 aa6.39□□□□□ -1.39
SYNE2-213ENST00000554805 WFDC10BQ8IUB3 73 aa6.39□□□□□ -1.39
SYNE2-213ENST00000554805 TENM3Q9P273 2699 aa6.39□□□□□ -1.39
SYNE2-213ENST00000554805 MUC7Q8TAX7 377 aa6.38□□□□□ -1.39
SYNE2-213ENST00000554805 RETNQ9HD89 108 aa6.38□□□□□ -1.39
SYNE2-213ENST00000554805 LINC01547P58512 204 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-213ENST00000554805 PRR34Q9NV39 138 aa6.38□□□□□ -1.39
SYNE2-213ENST00000554805 KPRPQ5T749 579 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-213ENST00000554805 IGKV2D-24A0A075B6R9 120 aa6.37□□□□□ -1.39
SYNE2-213ENST00000554805 LOC110117498A0A087WWA1 95 aa6.37□□□□□ -1.39
SYNE2-213ENST00000554805 PDE6GP18545 87 aa6.37□□□□□ -1.39
SYNE2-213ENST00000554805 Q6ZRU5 148 aa6.36□□□□□ -1.39
SYNE2-213ENST00000554805 DPH3Q96FX2 82 aa6.36□□□□□ -1.39
SYNE2-213ENST00000554805 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-213ENST00000554805 DEFB105AQ8NG35 78 aa6.36□□□□□ -1.39
SYNE2-213ENST00000554805 C1orf43Q9BWL3 253 aa6.35□□□□□ -1.39
SYNE2-213ENST00000554805 GVQW2A0A096LPI5 108 aaPredicted RBP6.35□□□□□ -1.39
SYNE2-213ENST00000554805 H3BQ85 93 aa6.35□□□□□ -1.39
SYNE2-213ENST00000554805 M0R378 163 aa6.35□□□□□ -1.39
SYNE2-213ENST00000554805 TRAV10A0A0B4J240 114 aa6.34□□□□□ -1.39
SYNE2-213ENST00000554805 MRAPQ8TCY5 172 aa6.34□□□□□ -1.39
SYNE2-213ENST00000554805 Q6ZTC4 211 aa6.34□□□□□ -1.39
SYNE2-213ENST00000554805 SNURFQ9Y675 71 aa6.34□□□□□ -1.39
SYNE2-213ENST00000554805 EGFEM1PQ0D2K5 195 aa6.34□□□□□ -1.4
SYNE2-213ENST00000554805 KRTAP24-1Q3LI83 254 aa6.33□□□□□ -1.4
SYNE2-213ENST00000554805 NKAPP1Q8N9T2 125 aa6.33□□□□□ -1.4
SYNE2-213ENST00000554805 TRAV7A0A075B6U4 112 aa6.33□□□□□ -1.4
SYNE2-213ENST00000554805 NDUFC2-KCTD14E9PQ53 114 aa6.33□□□□□ -1.4
SYNE2-213ENST00000554805 VPREB1P12018 145 aa6.33□□□□□ -1.4
SYNE2-213ENST00000554805 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms