RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 PPP3R1P63098 170 aa-1.38□□□□□ -2.63
PCNX1-208ENST00000554707 VPS13DQ5THJ4 4388 aa-1.38□□□□□ -2.63
PCNX1-208ENST00000554707 ANKRD11Q6UB99 2663 aaPredicted RBP-1.38□□□□□ -2.63
PCNX1-208ENST00000554707 NBEAL2Q6ZNJ1 2754 aa-1.38□□□□□ -2.63
PCNX1-208ENST00000554707 TOP2BQ02880 1626 aa-1.39□□□□□ -2.63
PCNX1-208ENST00000554707 UNC13AQ9UPW8 1703 aa-1.39□□□□□ -2.63
PCNX1-208ENST00000554707 H0Y9P7 68 aa-1.39□□□□□ -2.63
PCNX1-208ENST00000554707 S100A1P23297 94 aa-1.39□□□□□ -2.63
PCNX1-208ENST00000554707 KRTDAPP60985 99 aa-1.39□□□□□ -2.63
PCNX1-208ENST00000554707 RPL13AP3Q6NVV1 102 aa-1.39□□□□□ -2.63
PCNX1-208ENST00000554707 CGREF1Q99674 301 aa-1.39□□□□□ -2.63
PCNX1-208ENST00000554707 CDKN2A-AS1Q9UH64 79 aa-1.39□□□□□ -2.63
PCNX1-208ENST00000554707 CCL22O00626 93 aa-1.4□□□□□ -2.63
PCNX1-208ENST00000554707 ARMS2P0C7Q2 107 aa-1.4□□□□□ -2.63
PCNX1-208ENST00000554707 GNG4P50150 75 aa-1.4□□□□□ -2.63
PCNX1-208ENST00000554707 WFDC13Q8IUB5 93 aa-1.4□□□□□ -2.63
PCNX1-208ENST00000554707 MYOM2P54296 1465 aa-1.4□□□□□ -2.63
PCNX1-208ENST00000554707 ANK3Q12955 4377 aaKnown RBP-1.4□□□□□ -2.63
PCNX1-208ENST00000554707 MARF1Q9Y4F3 1742 aaKnown RBP-1.4□□□□□ -2.63
PCNX1-208ENST00000554707 SPTY2D1-AS1A0A0U1RR47 76 aa-1.41□□□□□ -2.64
PCNX1-208ENST00000554707 hADV29S1A0JD25 119 aa-1.41□□□□□ -2.64
PCNX1-208ENST00000554707 SPRR2FQ96RM1 72 aa-1.41□□□□□ -2.64
PCNX1-208ENST00000554707 TCHHQ07283 1943 aa-1.41□□□□□ -2.64
PCNX1-208ENST00000554707 SLIT1O75093 1534 aa-1.41□□□□□ -2.64
PCNX1-208ENST00000554707 DIP2CQ9Y2E4 1556 aa-1.42□□□□□ -2.64
PCNX1-208ENST00000554707 EDC4Q6P2E9 1401 aaKnown RBP-1.42□□□□□ -2.64
PCNX1-208ENST00000554707 A0A1B0GV90 55 aa-1.43□□□□□ -2.64
PCNX1-208ENST00000554707 DEFA5Q01523 94 aa-1.43□□□□□ -2.64
PCNX1-208ENST00000554707 PSMG4Q5JS54 123 aa-1.43□□□□□ -2.64
PCNX1-208ENST00000554707 MRC2Q9UBG0 1479 aa-1.43□□□□□ -2.64
PCNX1-208ENST00000554707 TRBV7-7A0A0K0K1E9 115 aa-1.44□□□□□ -2.64
PCNX1-208ENST00000554707 H3BQ15 152 aa-1.44□□□□□ -2.64
PCNX1-208ENST00000554707 CORTO00230 105 aa-1.44□□□□□ -2.64
PCNX1-208ENST00000554707 HIGD1BQ9P298 99 aa-1.44□□□□□ -2.64
PCNX1-208ENST00000554707 CACFD1Q9UGQ2 172 aa-1.44□□□□□ -2.64
PCNX1-208ENST00000554707 NUP188Q5SRE5 1749 aa-1.44□□□□□ -2.64
PCNX1-208ENST00000554707 HTTP42858 3142 aa-1.44□□□□□ -2.64
PCNX1-208ENST00000554707 ARHGAP5Q13017 1502 aa-1.45□□□□□ -2.64
PCNX1-208ENST00000554707 DLEU1O43261 78 aa-1.45□□□□□ -2.64
PCNX1-208ENST00000554707 MGAM2Q2M2H8 2515 aa-1.46□□□□□ -2.64
PCNX1-208ENST00000554707 PMCHL1Q16048 86 aa-1.46□□□□□ -2.64
PCNX1-208ENST00000554707 KRTAP20-1Q3LI63 56 aa-1.46□□□□□ -2.64
PCNX1-208ENST00000554707 TEX15Q9BXT5 2789 aa-1.46□□□□□ -2.64
PCNX1-208ENST00000554707 CUL7Q14999 1698 aa-1.46□□□□□ -2.64
PCNX1-208ENST00000554707 PKD1P98161 4303 aa-1.47□□□□□ -2.64
PCNX1-208ENST00000554707 CLIP1P30622 1438 aa-1.47□□□□□ -2.64
PCNX1-208ENST00000554707 H3BNG1 76 aa-1.47□□□□□ -2.64
PCNX1-208ENST00000554707 GTF2H5Q6ZYL4 71 aa-1.47□□□□□ -2.64
PCNX1-208ENST00000554707 GNG8Q9UK08 70 aa-1.47□□□□□ -2.64
PCNX1-208ENST00000554707 RIF1Q5UIP0 2472 aaKnown RBP-1.47□□□□□ -2.65
PCNX1-208ENST00000554707 REV3LO60673 3130 aa-1.48□□□□□ -2.65
PCNX1-208ENST00000554707 AKAP9Q99996 3911 aa-1.48□□□□□ -2.65
PCNX1-208ENST00000554707 ITPR1Q14643 2758 aa-1.48□□□□□ -2.65
PCNX1-208ENST00000554707 MTORP42345 2549 aa-1.48□□□□□ -2.65
PCNX1-208ENST00000554707 TROQ12816 1431 aaPredicted RBP-1.49□□□□□ -2.65
PCNX1-208ENST00000554707 KNDC1Q76NI1 1749 aa-1.49□□□□□ -2.65
PCNX1-208ENST00000554707 VPS13BQ7Z7G8 4022 aa-1.49□□□□□ -2.65
PCNX1-208ENST00000554707 CMYA5Q8N3K9 4069 aa-1.49□□□□□ -2.65
PCNX1-208ENST00000554707 ADAMTS12P58397 1594 aa-1.49□□□□□ -2.65
PCNX1-208ENST00000554707 TRBV25-1A0A075B6N4 114 aa-1.49□□□□□ -2.65
PCNX1-208ENST00000554707 PSENENQ9NZ42 101 aa-1.49□□□□□ -2.65
PCNX1-208ENST00000554707 SPG11Q96JI7 2443 aa-1.49□□□□□ -2.65
PCNX1-208ENST00000554707 NCOA3Q9Y6Q9 1424 aa-1.49□□□□□ -2.65
PCNX1-208ENST00000554707 PTPN23Q9H3S7 1636 aa-1.5□□□□□ -2.65
PCNX1-208ENST00000554707 GNGT2O14610 69 aa-1.5□□□□□ -2.65
PCNX1-208ENST00000554707 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.5□□□□□ -2.653e-6■■■■□ 19.3
PCNX1-208ENST00000554707 NBASA2RRP1 2371 aa-1.5□□□□□ -2.65
PCNX1-208ENST00000554707 CCDC168Q8NDH2 2452 aa-1.51□□□□□ -2.65
PCNX1-208ENST00000554707 PDCD11Q14690 1871 aaKnown RBP-1.51□□□□□ -2.65
PCNX1-208ENST00000554707 LRRK2Q5S007 2527 aa-1.51□□□□□ -2.65
PCNX1-208ENST00000554707 TMEM218A2RU14 115 aa-1.51□□□□□ -2.65
PCNX1-208ENST00000554707 MT1AP04731 61 aa-1.51□□□□□ -2.65
PCNX1-208ENST00000554707 MT1HL1P0DM35 61 aa-1.51□□□□□ -2.65
PCNX1-208ENST00000554707 MT1HP80294 61 aa-1.51□□□□□ -2.65
PCNX1-208ENST00000554707 AP4S1Q9Y587 144 aa-1.51□□□□□ -2.65
PCNX1-208ENST00000554707 UQCRHP07919 91 aa-1.52□□□□□ -2.65
PCNX1-208ENST00000554707 GCN1Q92616 2671 aaKnown RBP-1.52□□□□□ -2.65
PCNX1-208ENST00000554707 PZPP20742 1482 aa-1.52□□□□□ -2.65
PCNX1-208ENST00000554707 DNAH9Q9NYC9 4486 aa-1.52□□□□□ -2.65
PCNX1-208ENST00000554707 NRKQ7Z2Y5 1582 aa-1.52□□□□□ -2.65
PCNX1-208ENST00000554707 LRRC37AA6NMS7 1700 aa-1.52□□□□□ -2.65
PCNX1-208ENST00000554707 NDUFC1O43677 76 aa-1.53□□□□□ -2.65
PCNX1-208ENST00000554707 KNL1Q8NG31 2342 aa-1.53□□□□□ -2.65
PCNX1-208ENST00000554707 TMEM203Q969S6 136 aa-1.53□□□□□ -2.65
PCNX1-208ENST00000554707 TRGV9Q99603 122 aa-1.53□□□□□ -2.65
PCNX1-208ENST00000554707 DYNC1H1Q14204 4646 aaKnown RBP-1.53□□□□□ -2.65
PCNX1-208ENST00000554707 NALCNQ8IZF0 1738 aa-1.54□□□□□ -2.66
PCNX1-208ENST00000554707 COL4A6Q14031 1691 aa-1.54□□□□□ -2.66
PCNX1-208ENST00000554707 ABCC5O15440 1437 aa-1.54□□□□□ -2.66
PCNX1-208ENST00000554707 ITPR2Q14571 2701 aa-1.54□□□□□ -2.66
PCNX1-208ENST00000554707 MRPS10P82664 201 aaKnown RBP-1.54□□□□□ -2.66
PCNX1-208ENST00000554707 LYSTQ99698 3801 aa-1.54□□□□□ -2.66
PCNX1-208ENST00000554707 TRANK1O15050 2925 aa-1.54□□□□□ -2.66
PCNX1-208ENST00000554707 CC2D2AQ9P2K1 1620 aa-1.55□□□□□ -2.66
PCNX1-208ENST00000554707 EFCAB10A6NFE3 127 aa-1.55□□□□□ -2.66
PCNX1-208ENST00000554707 RELNP78509 3460 aa-1.55□□□□□ -2.66
PCNX1-208ENST00000554707 TARBP1Q13395 1621 aaKnown RBP-1.55□□□□□ -2.66
PCNX1-208ENST00000554707 CICQ96RK0 1608 aaPredicted RBP-1.55□□□□□ -2.66
PCNX1-208ENST00000554707 MAPKBP1O60336 1514 aa-1.56□□□□□ -2.66
PCNX1-208ENST00000554707 CUX1P39880 1505 aa-1.56□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms