RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 PRR34Q9NV39 138 aa8.16□□□□□ -1.1
SHMT2-214ENST00000554604 TOMM7Q9P0U1 55 aa8.16□□□□□ -1.1
SHMT2-214ENST00000554604 TRBV20-1A0A075B6N2 111 aa8.15□□□□□ -1.1
SHMT2-214ENST00000554604 HAMPP81172 84 aa8.15□□□□□ -1.1
SHMT2-214ENST00000554604 ENHOQ6UWT2 76 aa8.15□□□□□ -1.1
SHMT2-214ENST00000554604 LOC107984156A0A0G2JMH3 177 aa8.14□□□□□ -1.11
SHMT2-214ENST00000554604 F8W1H4 67 aa8.14□□□□□ -1.11
SHMT2-214ENST00000554604 COX7A2LO14548 114 aa8.14□□□□□ -1.11
SHMT2-214ENST00000554604 SMR3BP02814 79 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-214ENST00000554604 NPC2P61916 151 aa8.14□□□□□ -1.11
SHMT2-214ENST00000554604 C14orf177Q52M58 125 aa8.14□□□□□ -1.11
SHMT2-214ENST00000554604 Q5VSD8 79 aa8.14□□□□□ -1.11
SHMT2-214ENST00000554604 ARL17AQ8IVW1 177 aa8.14□□□□□ -1.11
SHMT2-214ENST00000554604 DAND5Q8N907 189 aa8.14□□□□□ -1.11
SHMT2-214ENST00000554604 TRBV30A0A0K0K1B3 111 aa8.13□□□□□ -1.11
SHMT2-214ENST00000554604 FAM229AH3BQW9 127 aa8.13□□□□□ -1.11
SHMT2-214ENST00000554604 CXCL5P42830 114 aa8.13□□□□□ -1.11
SHMT2-214ENST00000554604 FOXI1Q12951 378 aa8.13□□□□□ -1.11
SHMT2-214ENST00000554604 C6orf226Q5I0X4 101 aa8.13□□□□□ -1.11
SHMT2-214ENST00000554604 SOSTDC1Q6X4U4 206 aa8.13□□□□□ -1.11
SHMT2-214ENST00000554604 SRRM2Q9UQ35 2752 aaKnown RBP8.13□□□□□ -1.11
SHMT2-214ENST00000554604 H3BMG7 143 aa8.12□□□□□ -1.11
SHMT2-214ENST00000554604 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
SHMT2-214ENST00000554604 TRAV8-4A0A0B4J246 113 aa8.11□□□□□ -1.11
SHMT2-214ENST00000554604 A0A0U1RRA0 63 aa8.11□□□□□ -1.11
SHMT2-214ENST00000554604 PSMB2P49721 201 aa8.11□□□□□ -1.11
SHMT2-214ENST00000554604 KIAA0087Q14695 138 aa8.11□□□□□ -1.11
SHMT2-214ENST00000554604 Q1RN00 199 aa8.11□□□□□ -1.11
SHMT2-214ENST00000554604 LINC01620Q4KN68 170 aa8.11□□□□□ -1.11
SHMT2-214ENST00000554604 PRO0461Q9UI25 63 aa8.11□□□□□ -1.11
SHMT2-214ENST00000554604 FLG2Q5D862 2391 aaPredicted RBP8.1□□□□□ -1.11
SHMT2-214ENST00000554604 DNAH8Q96JB1 4490 aa8.1□□□□□ -1.11
SHMT2-214ENST00000554604 IGLV10-54A0A075B6I4 117 aa8.1□□□□□ -1.11
SHMT2-214ENST00000554604 TCL1BO95988 128 aa8.1□□□□□ -1.11
SHMT2-214ENST00000554604 INAFM2P0DMQ5 153 aa8.1□□□□□ -1.11
SHMT2-214ENST00000554604 SCGB1C2P0DMR2 95 aa8.1□□□□□ -1.11
SHMT2-214ENST00000554604 LINC00158P58513 81 aa8.1□□□□□ -1.11
SHMT2-214ENST00000554604 MIR7-3HGQ8N6C7 128 aa8.1□□□□□ -1.11
SHMT2-214ENST00000554604 GAGE12HA6NDE8 117 aa8.09□□□□□ -1.11
SHMT2-214ENST00000554604 USP17L23D6RBM5 183 aa8.09□□□□□ -1.11
SHMT2-214ENST00000554604 H7C2G1 150 aa8.09□□□□□ -1.11
SHMT2-214ENST00000554604 MALP21145 153 aa8.09□□□□□ -1.11
SHMT2-214ENST00000554604 RPL13AP40429 203 aaKnown RBP8.09□□□□□ -1.11
SHMT2-214ENST00000554604 CKS1BP61024 79 aa8.09□□□□□ -1.11
SHMT2-214ENST00000554604 OCIAD2Q56VL3 154 aa8.09□□□□□ -1.11
SHMT2-214ENST00000554604 CFAP161Q6P656 301 aa8.09□□□□□ -1.11
SHMT2-214ENST00000554604 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
SHMT2-214ENST00000554604 TRIAP1O43715 76 aa8.08□□□□□ -1.12
SHMT2-214ENST00000554604 COX6CP09669 75 aa8.08□□□□□ -1.12
SHMT2-214ENST00000554604 COX17Q14061 63 aa8.08□□□□□ -1.12
SHMT2-214ENST00000554604 Q6ZSA8 131 aa8.08□□□□□ -1.12
SHMT2-214ENST00000554604 FAT1Q14517 4588 aa8.08□□□□□ -1.12
SHMT2-214ENST00000554604 SND1-IT1Q9HBX3 110 aa8.07□□□□□ -1.12
SHMT2-214ENST00000554604 K7ERU9 68 aa8.06□□□□□ -1.12
SHMT2-214ENST00000554604 PFN2P35080 140 aa8.06□□□□□ -1.12
SHMT2-214ENST00000554604 ATXN8Q156A1 80 aa8.06□□□□□ -1.12
SHMT2-214ENST00000554604 TRAV13-2A0A0B4J235 113 aa8.05□□□□□ -1.12
SHMT2-214ENST00000554604 M0QXV9 152 aa8.05□□□□□ -1.12
SHMT2-214ENST00000554604 SPAG11BQ08648 103 aa8.05□□□□□ -1.12
SHMT2-214ENST00000554604 C2orf82Q6UX34 121 aa8.05□□□□□ -1.12
SHMT2-214ENST00000554604 PLA2G1BP04054 148 aaKnown RBP8.04□□□□□ -1.12
SHMT2-214ENST00000554604 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
SHMT2-214ENST00000554604 KRTAP26-1Q6PEX3 210 aa8.04□□□□□ -1.12
SHMT2-214ENST00000554604 SCXQ7RTU7 201 aa8.04□□□□□ -1.12
SHMT2-214ENST00000554604 LINC00528Q8N1L1 170 aa8.04□□□□□ -1.12
SHMT2-214ENST00000554604 LINC01600Q96MT4 127 aa8.04□□□□□ -1.12
SHMT2-214ENST00000554604 VPS13BQ7Z7G8 4022 aa8.03□□□□□ -1.12
SHMT2-214ENST00000554604 IGKV2-28A0A075B6P5 120 aa8.02□□□□□ -1.13
SHMT2-214ENST00000554604 GVQW2A0A096LPI5 108 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-214ENST00000554604 IGKV2D-28P01615 120 aa8.02□□□□□ -1.13
SHMT2-214ENST00000554604 MTURNQ8N3F0 131 aa8.02□□□□□ -1.13
SHMT2-214ENST00000554604 LST1O00453 97 aa8.01□□□□□ -1.13
SHMT2-214ENST00000554604 RPL28P46779 137 aaKnown RBP8.01□□□□□ -1.13
SHMT2-214ENST00000554604 C9orf163Q8N9P6 203 aa8.01□□□□□ -1.13
SHMT2-214ENST00000554604 C9JAW5 83 aa8□□□□□ -1.13
SHMT2-214ENST00000554604 SLC25A20O43772 301 aa8□□□□□ -1.13
SHMT2-214ENST00000554604 NDUFC2O95298 119 aa8□□□□□ -1.13
SHMT2-214ENST00000554604 ETDBQ3ZM63 59 aa8□□□□□ -1.13
SHMT2-214ENST00000554604 LINC00337Q8N6G1 96 aa8□□□□□ -1.13
SHMT2-214ENST00000554604 CIRBP-AS1Q8TBR5 109 aa8□□□□□ -1.13
SHMT2-214ENST00000554604 TRBV10-2A0A0K0K1G8 114 aa7.99□□□□□ -1.13
SHMT2-214ENST00000554604 F8WDY8 70 aa7.99□□□□□ -1.13
SHMT2-214ENST00000554604 UNQ6190/PRO20217Q6UXQ8 127 aa7.99□□□□□ -1.13
SHMT2-214ENST00000554604 J3QR89 54 aa7.98□□□□□ -1.13
SHMT2-214ENST00000554604 CNBPP62633 177 aaKnown RBP7.98□□□□□ -1.13
SHMT2-214ENST00000554604 C10orf25Q5T742 122 aa7.98□□□□□ -1.13
SHMT2-214ENST00000554604 TEN1Q86WV5 123 aa7.98□□□□□ -1.13
SHMT2-214ENST00000554604 CLEC2BQ92478 149 aa7.98□□□□□ -1.13
SHMT2-214ENST00000554604 H3BT86 120 aa7.97□□□□□ -1.13
SHMT2-214ENST00000554604 ANKRD29Q8N6D5 301 aa7.97□□□□□ -1.13
SHMT2-214ENST00000554604 C2orf48Q96LS8 159 aa7.97□□□□□ -1.13
SHMT2-214ENST00000554604 ZNF561-AS1K7EIQ3 104 aa7.96□□□□□ -1.14
SHMT2-214ENST00000554604 TRACP01848 142 aa7.96□□□□□ -1.14
SHMT2-214ENST00000554604 C9orf116Q5BN46 136 aaPredicted RBP7.96□□□□□ -1.14
SHMT2-214ENST00000554604 SDIM1Q6ZPB5 146 aa7.96□□□□□ -1.14
SHMT2-214ENST00000554604 C15orf56Q8N910 161 aa7.96□□□□□ -1.14
SHMT2-214ENST00000554604 RNF151Q2KHN1 245 aa7.95□□□□□ -1.14
SHMT2-214ENST00000554604 SMIM11BQ8TCY0 68 aa7.95□□□□□ -1.14
SHMT2-214ENST00000554604 PPDPFLQ8WWR9 84 aa7.95□□□□□ -1.14
SHMT2-214ENST00000554604 LINC00526Q96FQ7 95 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms