RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 TIMM17BO60830 172 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 IGHV3-30P01768 117 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 IGHV3-30-5P0DP03 117 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 RPL24P83731 157 aaKnown RBP3.68□□□□□ -1.82
ATXN3-226ENST00000554350 COTL1Q14019 142 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 FAM104AQ969W3 186 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 RAB37Q96AX2 223 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 LINC01600Q96MT4 127 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 CHCHD7Q9BUK0 85 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 GTSF1LQ9H1H1 148 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 UBE2D4Q9Y2X8 147 aa3.68□□□□□ -1.82
ATXN3-226ENST00000554350 A0A0B4J2C4 111 aa3.67□□□□□ -1.82
ATXN3-226ENST00000554350 IFITM1P13164 125 aa3.67□□□□□ -1.82
ATXN3-226ENST00000554350 HTN1P15515 57 aa3.67□□□□□ -1.82
ATXN3-226ENST00000554350 PCP4P48539 62 aa3.67□□□□□ -1.82
ATXN3-226ENST00000554350 UBE2D3P61077 147 aa3.67□□□□□ -1.82
ATXN3-226ENST00000554350 UBE2D2P62837 147 aa3.67□□□□□ -1.82
ATXN3-226ENST00000554350 C10orf126Q8N4M7 172 aa3.67□□□□□ -1.82
ATXN3-226ENST00000554350 C16orf74Q96GX8 76 aa3.67□□□□□ -1.82
ATXN3-226ENST00000554350 SPANXDQ9BXN6 97 aa3.67□□□□□ -1.82
ATXN3-226ENST00000554350 SPANXCQ9NY87 97 aa3.67□□□□□ -1.82
ATXN3-226ENST00000554350 A0A0J9YXV3 536 aa3.66□□□□□ -1.82
ATXN3-226ENST00000554350 TRBV6-4A0A1B0GX49 114 aa3.66□□□□□ -1.82
ATXN3-226ENST00000554350 IGHV3-30-3P0DP02 117 aa3.66□□□□□ -1.82
ATXN3-226ENST00000554350 AZU1P20160 251 aa3.66□□□□□ -1.82
ATXN3-226ENST00000554350 HERVK_113P63121 156 aa3.66□□□□□ -1.82
ATXN3-226ENST00000554350 ATP6V0E2Q8NHE4 81 aa3.66□□□□□ -1.82
ATXN3-226ENST00000554350 COPS9Q8WXC6 57 aa3.66□□□□□ -1.82
ATXN3-226ENST00000554350 VSIG2Q96IQ7 327 aa3.66□□□□□ -1.82
ATXN3-226ENST00000554350 Q9HAA7 133 aa3.66□□□□□ -1.82
ATXN3-226ENST00000554350 PRO1854Q9UHT4 67 aa3.66□□□□□ -1.82
ATXN3-226ENST00000554350 A0A096LPF7 62 aa3.65□□□□□ -1.83
ATXN3-226ENST00000554350 H3BMG7 143 aa3.65□□□□□ -1.83
ATXN3-226ENST00000554350 K7EQD1 137 aa3.65□□□□□ -1.83
ATXN3-226ENST00000554350 K7ERJ3 54 aa3.65□□□□□ -1.83
ATXN3-226ENST00000554350 LECT2O14960 151 aa3.65□□□□□ -1.83
ATXN3-226ENST00000554350 TSPEAR-AS2P59090 65 aa3.65□□□□□ -1.83
ATXN3-226ENST00000554350 NOP10Q9NPE3 64 aaKnown RBP3.65□□□□□ -1.83
ATXN3-226ENST00000554350 MRPL16Q9NX20 251 aaKnown RBP3.65□□□□□ -1.83
ATXN3-226ENST00000554350 PRO0461Q9UI25 63 aa3.65□□□□□ -1.83
ATXN3-226ENST00000554350 TRBV30A0A0K0K1B3 111 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 PLAC8L1A1L4L8 177 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 H3BNG1 76 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 NDUFA1O15239 70 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 GAGE7O76087 117 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 TSPAN13O95857 204 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 GAGE12FP0CL80 117 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 GAGE12GP0CL81 117 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 GAGE12IP0CL82 117 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 HERV-K104P63124 156 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 CIRBPQ14011 172 aaKnown RBP3.64□□□□□ -1.83
ATXN3-226ENST00000554350 DGAT2L7PQ6IED9 249 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 LINC00612Q8N6U2 182 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 LITAFQ99732 161 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 OPRPNQ99935 248 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-226ENST00000554350 VPS25Q9BRG1 176 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 GEMIN7Q9H840 131 aaKnown RBP3.64□□□□□ -1.83
ATXN3-226ENST00000554350 NDUFA12Q9UI09 145 aa3.64□□□□□ -1.83
ATXN3-226ENST00000554350 TRGV1A0A0A0MS02 117 aa3.63□□□□□ -1.83
ATXN3-226ENST00000554350 IGHV3-73A0A0B4J1V6 119 aa3.63□□□□□ -1.83
ATXN3-226ENST00000554350 A4D1N5 150 aa3.63□□□□□ -1.83
ATXN3-226ENST00000554350 IGHV3-33P01772 117 aa3.63□□□□□ -1.83
ATXN3-226ENST00000554350 MIAQ16674 131 aa3.63□□□□□ -1.83
ATXN3-226ENST00000554350 SFTA2Q6UW10 78 aa3.63□□□□□ -1.83
ATXN3-226ENST00000554350 WFDC10BQ8IUB3 73 aa3.63□□□□□ -1.83
ATXN3-226ENST00000554350 MUSTN1Q8IVN3 82 aa3.63□□□□□ -1.83
ATXN3-226ENST00000554350 NAA38Q9BRA0 125 aaKnown RBP3.63□□□□□ -1.83
ATXN3-226ENST00000554350 CDC42SE2Q9NRR3 84 aa3.63□□□□□ -1.83
ATXN3-226ENST00000554350 ERG28Q9UKR5 140 aa3.63□□□□□ -1.83
ATXN3-226ENST00000554350 ICOSQ9Y6W8 199 aa3.63□□□□□ -1.83
ATXN3-226ENST00000554350 PANO1I0J062 215 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 APOMO95445 188 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 LINC00694P0DN24 101 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 SCGB1A1P11684 91 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 WFDC2Q14508 124 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 LINC00242Q5T6M2 205 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 NTM-AS1Q6ZSK4 140 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 Q6ZTI0 123 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 Q6ZUT4 128 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 LINC01561Q8N1V8 128 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 TMEM101Q96IK0 257 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 TMEM243Q9BU79 118 aa3.62□□□□□ -1.83
ATXN3-226ENST00000554350 TRGV2A0A075B6R0 118 aa3.61□□□□□ -1.83
ATXN3-226ENST00000554350 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-226ENST00000554350 IGKV2-29A2NJV5 120 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-226ENST00000554350 COX6CP09669 75 aa3.61□□□□□ -1.83
ATXN3-226ENST00000554350 C14orf177Q52M58 125 aa3.61□□□□□ -1.83
ATXN3-226ENST00000554350 LYPD5Q6UWN5 251 aa3.61□□□□□ -1.83
ATXN3-226ENST00000554350 TEN1Q86WV5 123 aa3.61□□□□□ -1.83
ATXN3-226ENST00000554350 KRTAP7-1Q8IUC3 87 aa3.61□□□□□ -1.83
ATXN3-226ENST00000554350 Q9UF83 564 aa3.61□□□□□ -1.83
ATXN3-226ENST00000554350 CDKN2A-AS1Q9UH64 79 aa3.61□□□□□ -1.83
ATXN3-226ENST00000554350 TRBV6-8A0A0A6YYG3 113 aa3.6□□□□□ -1.83
ATXN3-226ENST00000554350 TRAV8-3A0A0A6YYJ7 113 aa3.6□□□□□ -1.83
ATXN3-226ENST00000554350 IGHV3-38A0A0C4DH36 116 aa3.6□□□□□ -1.83
ATXN3-226ENST00000554350 LOC107984156A0A0G2JMH3 177 aa3.6□□□□□ -1.83
ATXN3-226ENST00000554350 SMIM1B2RUZ4 78 aa3.6□□□□□ -1.83
ATXN3-226ENST00000554350 UBE2L6O14933 153 aa3.6□□□□□ -1.83
ATXN3-226ENST00000554350 SCGB1C2P0DMR2 95 aa3.6□□□□□ -1.83
ATXN3-226ENST00000554350 ATXN8Q156A1 80 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms