RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 TSPEAR-AS2P59090 65 aa5.82□□□□□ -1.48
TDP1-208ENST00000553989 HERVK_113P63121 156 aa5.82□□□□□ -1.48
TDP1-208ENST00000553989 ATXN8Q156A1 80 aa5.82□□□□□ -1.48
TDP1-208ENST00000553989 FAM19A3Q7Z5A8 133 aa5.82□□□□□ -1.48
TDP1-208ENST00000553989 TEN1Q86WV5 123 aa5.82□□□□□ -1.48
TDP1-208ENST00000553989 CHCHD7Q9BUK0 85 aa5.82□□□□□ -1.48
TDP1-208ENST00000553989 UBE2D4Q9Y2X8 147 aa5.82□□□□□ -1.48
TDP1-208ENST00000553989 H7C423 109 aa5.81□□□□□ -1.48
TDP1-208ENST00000553989 PRSS2P07478 247 aa5.81□□□□□ -1.48
TDP1-208ENST00000553989 RPL36AP83881 106 aaKnown RBP5.81□□□□□ -1.48
TDP1-208ENST00000553989 RPL36ALQ969Q0 106 aaKnown RBP5.81□□□□□ -1.48
TDP1-208ENST00000553989 PPDPFQ9H3Y8 114 aa5.81□□□□□ -1.48
TDP1-208ENST00000553989 NDUFA12Q9UI09 145 aa5.81□□□□□ -1.48
TDP1-208ENST00000553989 KLK12Q9UKR0 248 aa5.81□□□□□ -1.48
TDP1-208ENST00000553989 IGLV5-45A0A087WSX0 123 aa5.8□□□□□ -1.48
TDP1-208ENST00000553989 TCL1BO95988 128 aa5.8□□□□□ -1.48
TDP1-208ENST00000553989 LINC00694P0DN24 101 aa5.8□□□□□ -1.48
TDP1-208ENST00000553989 SERTAD4-AS1Q5TG53 156 aa5.8□□□□□ -1.48
TDP1-208ENST00000553989 UBE2WQ96B02 151 aa5.8□□□□□ -1.48
TDP1-208ENST00000553989 NDUFA1O15239 70 aa5.79□□□□□ -1.48
TDP1-208ENST00000553989 MIAQ16674 131 aa5.79□□□□□ -1.48
TDP1-208ENST00000553989 FAM104AQ969W3 186 aa5.79□□□□□ -1.48
TDP1-208ENST00000553989 TRBV10-2A0A0K0K1G8 114 aa5.78□□□□□ -1.48
TDP1-208ENST00000553989 SLC25A20O43772 301 aa5.78□□□□□ -1.48
TDP1-208ENST00000553989 CRPP02741 224 aa5.78□□□□□ -1.48
TDP1-208ENST00000553989 HERV-K104P63124 156 aa5.78□□□□□ -1.48
TDP1-208ENST00000553989 Q1RN00 199 aa5.78□□□□□ -1.48
TDP1-208ENST00000553989 C14orf177Q52M58 125 aa5.78□□□□□ -1.48
TDP1-208ENST00000553989 CIRBP-AS1Q8TBR5 109 aa5.78□□□□□ -1.48
TDP1-208ENST00000553989 TMEM101Q96IK0 257 aa5.78□□□□□ -1.48
TDP1-208ENST00000553989 Q9UF83 564 aa5.78□□□□□ -1.48
TDP1-208ENST00000553989 ANKRD29Q8N6D5 301 aa5.77□□□□□ -1.49
TDP1-208ENST00000553989 LITAFQ99732 161 aa5.77□□□□□ -1.49
TDP1-208ENST00000553989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.76□□□□□ -1.49
TDP1-208ENST00000553989 IGLV5-39A0A0G2JS06 123 aa5.76□□□□□ -1.49
TDP1-208ENST00000553989 A0A1B0GV72 72 aa5.76□□□□□ -1.49
TDP1-208ENST00000553989 IGKV2-29A2NJV5 120 aaPredicted RBP5.76□□□□□ -1.49
TDP1-208ENST00000553989 H3BT86 120 aa5.76□□□□□ -1.49
TDP1-208ENST00000553989 OXTP01178 125 aa5.76□□□□□ -1.49
TDP1-208ENST00000553989 RPL13AP40429 203 aaKnown RBP5.76□□□□□ -1.49
TDP1-208ENST00000553989 RPL37AP61513 92 aaKnown RBP5.76□□□□□ -1.49
TDP1-208ENST00000553989 CARD19Q96LW7 228 aa5.76□□□□□ -1.49
TDP1-208ENST00000553989 IGHV3-64A0A075B6Q5 118 aa5.75□□□□□ -1.49
TDP1-208ENST00000553989 C9JAW5 83 aa5.75□□□□□ -1.49
TDP1-208ENST00000553989 ANGP03950 147 aaKnown RBP5.75□□□□□ -1.49
TDP1-208ENST00000553989 SPINK8P0C7L1 97 aa5.75□□□□□ -1.49
TDP1-208ENST00000553989 ADAMTSL4-AS1Q5T5F5 129 aa5.75□□□□□ -1.49
TDP1-208ENST00000553989 CDC42SE2Q9NRR3 84 aa5.75□□□□□ -1.49
TDP1-208ENST00000553989 CDKN2A-AS1Q9UH64 79 aa5.75□□□□□ -1.49
TDP1-208ENST00000553989 UBE2L6O14933 153 aa5.74□□□□□ -1.49
TDP1-208ENST00000553989 LINC00242Q5T6M2 205 aa5.74□□□□□ -1.49
TDP1-208ENST00000553989 SFTA2Q6UW10 78 aa5.74□□□□□ -1.49
TDP1-208ENST00000553989 Q6ZUT4 128 aa5.74□□□□□ -1.49
TDP1-208ENST00000553989 TMEM243Q9BU79 118 aa5.74□□□□□ -1.49
TDP1-208ENST00000553989 USP17L23D6RBM5 183 aa5.73□□□□□ -1.49
TDP1-208ENST00000553989 H7C2G1 150 aa5.73□□□□□ -1.49
TDP1-208ENST00000553989 KRTAP10-4P60372 401 aaPredicted RBP5.73□□□□□ -1.49
TDP1-208ENST00000553989 C2orf82Q6UX34 121 aa5.73□□□□□ -1.49
TDP1-208ENST00000553989 CHCHD5Q9BSY4 110 aa5.73□□□□□ -1.49
TDP1-208ENST00000553989 TRBV6-8A0A0A6YYG3 113 aa5.72□□□□□ -1.49
TDP1-208ENST00000553989 TRIAP1O43715 76 aa5.72□□□□□ -1.49
TDP1-208ENST00000553989 CLPSL2Q6UWE3 100 aa5.72□□□□□ -1.49
TDP1-208ENST00000553989 ENHOQ6UWT2 76 aa5.72□□□□□ -1.49
TDP1-208ENST00000553989 LINC00308Q8TCZ7 52 aa5.72□□□□□ -1.49
TDP1-208ENST00000553989 DNAH8Q96JB1 4490 aa5.71□□□□□ -1.49
TDP1-208ENST00000553989 TRAV13-2A0A0B4J235 113 aa5.71□□□□□ -1.5
TDP1-208ENST00000553989 LST1O00453 97 aa5.71□□□□□ -1.5
TDP1-208ENST00000553989 ACYP1P07311 99 aa5.71□□□□□ -1.5
TDP1-208ENST00000553989 CKS1BP61024 79 aa5.71□□□□□ -1.5
TDP1-208ENST00000553989 COX6A2Q02221 97 aa5.71□□□□□ -1.5
TDP1-208ENST00000553989 RNASE13Q5GAN3 156 aaKnown RBP5.71□□□□□ -1.5
TDP1-208ENST00000553989 TRAV8-4A0A0B4J246 113 aa5.7□□□□□ -1.5
TDP1-208ENST00000553989 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
TDP1-208ENST00000553989 Q6Q795 121 aa5.7□□□□□ -1.5
TDP1-208ENST00000553989 NTM-AS1Q6ZSK4 140 aa5.7□□□□□ -1.5
TDP1-208ENST00000553989 LINC01561Q8N1V8 128 aa5.7□□□□□ -1.5
TDP1-208ENST00000553989 TRAV13-1A0A0B4J241 112 aa5.69□□□□□ -1.5
TDP1-208ENST00000553989 FAM240AA0A1B0GVK7 77 aa5.69□□□□□ -1.5
TDP1-208ENST00000553989 SMIM1B2RUZ4 78 aa5.69□□□□□ -1.5
TDP1-208ENST00000553989 COX7A2LO14548 114 aa5.69□□□□□ -1.5
TDP1-208ENST00000553989 TRACP01848 142 aa5.69□□□□□ -1.5
TDP1-208ENST00000553989 GAGE2BQ13066 116 aa5.69□□□□□ -1.5
TDP1-208ENST00000553989 GAGE6Q13070 117 aa5.69□□□□□ -1.5
TDP1-208ENST00000553989 GAGE2EQ4V326 116 aa5.69□□□□□ -1.5
TDP1-208ENST00000553989 DPH3Q96FX2 82 aa5.69□□□□□ -1.5
TDP1-208ENST00000553989 ZNF625Q96I27 306 aaPredicted RBP5.69□□□□□ -1.5
TDP1-208ENST00000553989 GAGE2DQ9UEU5 116 aa5.69□□□□□ -1.5
TDP1-208ENST00000553989 SNCGO76070 127 aa5.68□□□□□ -1.5
TDP1-208ENST00000553989 LINC00269Q8N2A0 174 aa5.68□□□□□ -1.5
TDP1-208ENST00000553989 C9orf163Q8N9P6 203 aa5.68□□□□□ -1.5
TDP1-208ENST00000553989 COX7B2Q8TF08 81 aa5.68□□□□□ -1.5
TDP1-208ENST00000553989 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
TDP1-208ENST00000553989 IGLV10-54A0A075B6I4 117 aa5.67□□□□□ -1.5
TDP1-208ENST00000553989 H0YGX0 51 aa5.67□□□□□ -1.5
TDP1-208ENST00000553989 MT-ATP8P03928 68 aa5.67□□□□□ -1.5
TDP1-208ENST00000553989 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
TDP1-208ENST00000553989 A0A1B0GUV1 79 aa5.66□□□□□ -1.5
TDP1-208ENST00000553989 RPL28P46779 137 aaKnown RBP5.66□□□□□ -1.5
TDP1-208ENST00000553989 REG3AQ06141 175 aa5.66□□□□□ -1.5
TDP1-208ENST00000553989 PRR34Q9NV39 138 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms