RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 Q9BRP9 147 aa10.67□□□□□ -0.7
ARHGEF40-202ENST00000553709 FHL3Q13643 280 aa10.67□□□□□ -0.7
ARHGEF40-202ENST00000553709 PRO0461Q9UI25 63 aa10.67□□□□□ -0.7
ARHGEF40-202ENST00000553709 LINC01547P58512 204 aaPredicted RBP10.67□□□□□ -0.7
ARHGEF40-202ENST00000553709 Q9UF83 564 aa10.67□□□□□ -0.7
ARHGEF40-202ENST00000553709 ESRGQ1W209 222 aa10.66□□□□□ -0.7
ARHGEF40-202ENST00000553709 MTORP42345 2549 aa10.66□□□□□ -0.7
ARHGEF40-202ENST00000553709 A0A087WSZ3 146 aa10.65□□□□□ -0.7
ARHGEF40-202ENST00000553709 ANKRD17O75179 2603 aaKnown RBP10.65□□□□□ -0.7
ARHGEF40-202ENST00000553709 KLK9Q2XQG4 91 aa10.65□□□□□ -0.71
ARHGEF40-202ENST00000553709 POLQO75417 2590 aa10.64□□□□□ -0.71
ARHGEF40-202ENST00000553709 K7ERS5 55 aa10.62□□□□□ -0.71
ARHGEF40-202ENST00000553709 NHLRC4P0CG21 123 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF40-202ENST00000553709 CXCL6P80162 114 aa10.61□□□□□ -0.71
ARHGEF40-202ENST00000553709 TMEM254Q8TBM7 123 aa10.61□□□□□ -0.71
ARHGEF40-202ENST00000553709 XIRP2A4UGR9 3374 aa10.61□□□□□ -0.71
ARHGEF40-202ENST00000553709 IGHV6-1A0A0B4J1U7 121 aa10.61□□□□□ -0.71
ARHGEF40-202ENST00000553709 CIRBP-AS1Q8TBR5 109 aa10.6□□□□□ -0.71
ARHGEF40-202ENST00000553709 FAM218AQ96MZ4 157 aa10.6□□□□□ -0.71
ARHGEF40-202ENST00000553709 C22orf24Q9Y442 160 aa10.6□□□□□ -0.71
ARHGEF40-202ENST00000553709 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
ARHGEF40-202ENST00000553709 IGLV5-52A0A0A0MRZ9 124 aa10.59□□□□□ -0.71
ARHGEF40-202ENST00000553709 PRO0628Q9UI54 55 aa10.59□□□□□ -0.71
ARHGEF40-202ENST00000553709 PSPHP1O15172 72 aa10.59□□□□□ -0.71
ARHGEF40-202ENST00000553709 PRLHP81277 87 aa10.59□□□□□ -0.71
ARHGEF40-202ENST00000553709 TNRC18O15417 2968 aaPredicted RBP10.58□□□□□ -0.72
ARHGEF40-202ENST00000553709 DEFB116Q30KQ4 102 aa10.58□□□□□ -0.72
ARHGEF40-202ENST00000553709 X6R8D5 127 aa10.58□□□□□ -0.72
ARHGEF40-202ENST00000553709 FSHBP01225 129 aa10.58□□□□□ -0.72
ARHGEF40-202ENST00000553709 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
ARHGEF40-202ENST00000553709 C6orf48Q9UBA6 75 aa10.58□□□□□ -0.72
ARHGEF40-202ENST00000553709 SPATA3Q8NHX4 192 aa10.57□□□□□ -0.72
ARHGEF40-202ENST00000553709 HCG22E2RYF7 251 aa10.57□□□□□ -0.72
ARHGEF40-202ENST00000553709 KIAA0087Q14695 138 aa10.55□□□□□ -0.72
ARHGEF40-202ENST00000553709 A0A0C4DFX4 3053 aa10.55□□□□□ -0.72
ARHGEF40-202ENST00000553709 C1orf134Q5TEV5 83 aa10.55□□□□□ -0.72
ARHGEF40-202ENST00000553709 H0Y9P7 68 aa10.54□□□□□ -0.72
ARHGEF40-202ENST00000553709 SMCR5Q8TEV8 140 aa10.54□□□□□ -0.72
ARHGEF40-202ENST00000553709 FASNP49327 2511 aaKnown RBP10.54□□□□□ -0.72
ARHGEF40-202ENST00000553709 C4orf26Q17RF5 130 aa10.53□□□□□ -0.72
ARHGEF40-202ENST00000553709 MUC4Q99102 2169 aa10.53□□□□□ -0.72
ARHGEF40-202ENST00000553709 PCOTHQ58A44 107 aa10.52□□□□□ -0.72
ARHGEF40-202ENST00000553709 TRBV7-6A0A0J9YX20 115 aa10.52□□□□□ -0.73
ARHGEF40-202ENST00000553709 H3BNG1 76 aa10.52□□□□□ -0.73
ARHGEF40-202ENST00000553709 LITAFQ99732 161 aa10.51□□□□□ -0.73
ARHGEF40-202ENST00000553709 LINC00167Q96N53 147 aa10.51□□□□□ -0.73
ARHGEF40-202ENST00000553709 A0A096LNT2 108 aa10.51□□□□□ -0.73
ARHGEF40-202ENST00000553709 ELOF1P60002 83 aaKnown RBP10.5□□□□□ -0.73
ARHGEF40-202ENST00000553709 CRYGAP11844 174 aa10.49□□□□□ -0.73
ARHGEF40-202ENST00000553709 MGAQ8IWI9 3026 aa10.49□□□□□ -0.73
ARHGEF40-202ENST00000553709 ACANP16112 2415 aa10.48□□□□□ -0.73
ARHGEF40-202ENST00000553709 SMIM29Q86T20 159 aa10.47□□□□□ -0.73
ARHGEF40-202ENST00000553709 hDV103S1A0JD37 113 aa10.47□□□□□ -0.73
ARHGEF40-202ENST00000553709 LAMA1P25391 3075 aa10.46□□□□□ -0.73
ARHGEF40-202ENST00000553709 Q6ZQT0 140 aa10.46□□□□□ -0.73
ARHGEF40-202ENST00000553709 BCE1O60756 84 aa10.46□□□□□ -0.73
ARHGEF40-202ENST00000553709 AKAP13Q12802 2813 aa10.46□□□□□ -0.74
ARHGEF40-202ENST00000553709 WDFY4Q6ZS81 3184 aa10.45□□□□□ -0.74
ARHGEF40-202ENST00000553709 LOC110117498A0A087WWA1 95 aa10.45□□□□□ -0.74
ARHGEF40-202ENST00000553709 Q8NAQ8 132 aa10.45□□□□□ -0.74
ARHGEF40-202ENST00000553709 A0A1B0GW54 56 aa10.44□□□□□ -0.74
ARHGEF40-202ENST00000553709 RETNLBQ9BQ08 111 aa10.44□□□□□ -0.74
ARHGEF40-202ENST00000553709 REV3LO60673 3130 aa10.43□□□□□ -0.74
ARHGEF40-202ENST00000553709 C1orf64Q8NEQ6 169 aa10.42□□□□□ -0.74
ARHGEF40-202ENST00000553709 RPS28P62857 69 aaKnown RBP10.42□□□□□ -0.74
ARHGEF40-202ENST00000553709 SPTBN5Q9NRC6 3674 aaKnown RBP10.42□□□□□ -0.74
ARHGEF40-202ENST00000553709 Q6ZRX8 168 aa10.41□□□□□ -0.74
ARHGEF40-202ENST00000553709 KRTAP24-1Q3LI83 254 aa10.41□□□□□ -0.74
ARHGEF40-202ENST00000553709 MDFIQ99750 246 aa10.4□□□□□ -0.74
ARHGEF40-202ENST00000553709 GVQW2A0A096LPI5 108 aaPredicted RBP10.39□□□□□ -0.75
ARHGEF40-202ENST00000553709 Q8NBF4 154 aa10.39□□□□□ -0.75
ARHGEF40-202ENST00000553709 DNAH14Q0VDD8 3507 aa10.38□□□□□ -0.75
ARHGEF40-202ENST00000553709 LIMD2Q9BT23 127 aa10.36□□□□□ -0.75
ARHGEF40-202ENST00000553709 COL6A3P12111 3177 aa10.36□□□□□ -0.75
ARHGEF40-202ENST00000553709 LINC00476Q8WZB0 136 aa10.36□□□□□ -0.75
ARHGEF40-202ENST00000553709 VPS13AQ96RL7 3174 aa10.35□□□□□ -0.75
ARHGEF40-202ENST00000553709 VCANP13611 3396 aa10.35□□□□□ -0.75
ARHGEF40-202ENST00000553709 CSNK1G2-AS1Q8NCQ2 148 aa10.35□□□□□ -0.75
ARHGEF40-202ENST00000553709 IGLV6-57P01721 117 aa10.34□□□□□ -0.75
ARHGEF40-202ENST00000553709 KRTAP1-3Q8IUG1 177 aa10.34□□□□□ -0.75
ARHGEF40-202ENST00000553709 LINC00588Q9Y4M8 146 aa10.34□□□□□ -0.75
ARHGEF40-202ENST00000553709 MOBPQ13875 183 aa10.33□□□□□ -0.76
ARHGEF40-202ENST00000553709 ST20-AS1Q8NBB2 130 aa10.33□□□□□ -0.76
ARHGEF40-202ENST00000553709 VPREB1P12018 145 aa10.33□□□□□ -0.76
ARHGEF40-202ENST00000553709 TP53AIP1Q9HCN2 124 aa10.33□□□□□ -0.76
ARHGEF40-202ENST00000553709 EIF4EBP3O60516 100 aaPredicted RBP10.33□□□□□ -0.76
ARHGEF40-202ENST00000553709 SPINK1P00995 79 aa10.33□□□□□ -0.76
ARHGEF40-202ENST00000553709 Q6ZRP5 223 aa10.33□□□□□ -0.76
ARHGEF40-202ENST00000553709 PHF5AQ7RTV0 110 aaKnown RBP10.32□□□□□ -0.76
ARHGEF40-202ENST00000553709 C16orf90A8MZG2 172 aa10.31□□□□□ -0.76
ARHGEF40-202ENST00000553709 CFAP54Q96N23 3096 aa10.31□□□□□ -0.76
ARHGEF40-202ENST00000553709 TM2D3Q9BRN9 247 aa10.3□□□□□ -0.76
ARHGEF40-202ENST00000553709 EPM2AB3EWF7 344 aa10.3□□□□□ -0.76
ARHGEF40-202ENST00000553709 EYSQ5T1H1 3165 aa10.28□□□□□ -0.76
ARHGEF40-202ENST00000553709 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
ARHGEF40-202ENST00000553709 HECTD1Q9ULT8 2610 aa10.27□□□□□ -0.76
ARHGEF40-202ENST00000553709 IGKV2D-30A0A075B6S6 120 aa10.27□□□□□ -0.77
ARHGEF40-202ENST00000553709 IGKV2-30P06310 120 aa10.27□□□□□ -0.77
ARHGEF40-202ENST00000553709 NBDYA0A0U1RRE5 68 aa10.26□□□□□ -0.77
ARHGEF40-202ENST00000553709 DSPP15924 2871 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms