RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 H3BVH4 76 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 TAX1BP3O14907 124 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 P01737 135 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 COX6A2Q02221 97 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 CD164Q04900 197 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 REG3AQ06141 175 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 C4orf26Q17RF5 130 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 FAM74A4Q5TZK3 123 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 PRNTQ86SH4 94 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 C15orf56Q8N910 161 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 C20orf203Q8NBC4 194 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 GTSF1Q8WW33 167 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 YPEL4Q96NS1 127 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 RNASE7Q9H1E1 156 aaKnown RBP2.14□□□□□ -2.07
LIMA1-206ENST00000550611 LAMTOR3Q9UHA4 124 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 PKIGQ9Y2B9 76 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 IGLV4-60A0A075B6I1 120 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 TRBV6-1A0A0K0K1D8 114 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 H7C1H1 209 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 SH2D1AO60880 128 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 SNCGO76070 127 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 DPM2O94777 84 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 ARL14EPLP0DKL9 152 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 GCHFRP30047 84 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 CXCL6P80162 114 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 Q1RN00 199 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 Q6Q795 121 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 CLPSL2Q6UWE3 100 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 C2orf66Q6UXQ4 117 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 LINC01561Q8N1V8 128 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 OR10AG1Q8NH19 301 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 PSORS1C2Q9UIG4 136 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 ARL2-SNX15V9GYD0 113 aa2.13□□□□□ -2.07
LIMA1-206ENST00000550611 A0A096LNI7 61 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 IGHV1-24A0A0C4DH33 117 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 IGKV2-24A0A0C4DH68 120 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 FAM231BA6NCW3 169 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 CCDC179H3BU77 68 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 M0R381 172 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 MT-ND6P03923 174 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 CXCL1P09341 107 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 IGLC6P0CF74 106 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 H2BFSP57053 126 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 MRPL55Q7Z7F7 128 aaKnown RBP2.12□□□□□ -2.07
LIMA1-206ENST00000550611 PPP1R1CQ8WVI7 109 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 RAB37Q96AX2 223 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 KIR2DL4Q99706 377 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 NAA38Q9BRA0 125 aaKnown RBP2.12□□□□□ -2.07
LIMA1-206ENST00000550611 TMEM191AQ9H0A3 160 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 LINC00474Q9P2X8 69 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 PHLDA3Q9Y5J5 127 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 SPCS1Q9Y6A9 102 aa2.12□□□□□ -2.07
LIMA1-206ENST00000550611 TRBV25-1A0A075B6N4 114 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 GVQW2A0A096LPI5 108 aaPredicted RBP2.11□□□□□ -2.07
LIMA1-206ENST00000550611 A0A1W2PNN7 141 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 ZNF727A8MUV8 499 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 M0QY20 66 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 PEX7O00628 323 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 CXorf1O96002 111 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 CTRLP40313 264 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 KRTDAPP60985 99 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 PMAIP1Q13794 54 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 ZNF726P1Q15940 193 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 PRR4Q16378 134 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 BVES-AS1Q5T3Y7 98 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 C9orf153Q5TBE3 101 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 SLC25A34Q6PIV7 304 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 Q6ZUT4 128 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 Q86TA4 180 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 BAGE3Q86Y29 109 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 BAGE2Q86Y30 109 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 COPS9Q8WXC6 57 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 PLEKHB2Q96CS7 222 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 AQP10Q96PS8 301 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 TMEM167BQ9NRX6 74 aa2.11□□□□□ -2.07
LIMA1-206ENST00000550611 NEBP20929 6669 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 TMSB15BA0A087X1C1 80 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 LOC107984640A0A0U1RRK4 108 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 FAM236DA0A1B0GTK5 79 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 A0A1W2PPM0 123 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 H3BUT2 72 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 LTAP01374 205 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 TRACP01848 142 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 OR5AL1P0C617 328 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 SMIM13P0DJ93 91 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 FAM236CP0DP71 79 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 BCL2P10415 239 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 HERVK_113P63121 156 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 SERF2P84101 59 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 ZNF56Q15929 161 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 HRCT1Q6UXD1 115 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 Q6ZVH6 145 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 ANKRD29Q8N6D5 301 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 C18orf32Q8TCD1 76 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 FMC1Q96HJ9 113 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 PGLYRP4Q96LB8 373 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 TMEM243Q9BU79 118 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 TRAPPC1Q9Y5R8 145 aa2.1□□□□□ -2.07
LIMA1-206ENST00000550611 IGLV1-50A0A075B6I6 118 aa2.09□□□□□ -2.07
LIMA1-206ENST00000550611 TRBV20-1A0A075B6N2 111 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms