RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 C6orf48Q9UBA6 75 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 C1orf195Q5TG92 126 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 LYRM7Q5U5X0 104 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 KRTAP1-5Q9BYS1 174 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 ERG28Q9UKR5 140 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 DOPEY2Q9Y3R5 2298 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 ABCA12Q86UK0 2595 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 CSMD2Q7Z408 3487 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 CREBBPQ92793 2442 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 RYR1P21817 5038 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 A0A087WTM6 91 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 A0A1B0GV72 72 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.05□□□□□ -1.92
SCAF11-212ENST00000549162 HIVEP1P15822 2718 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 ACACAQ13085 2346 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 LST1O00453 97 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 RTL8CO15255 209 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 MEIG1Q5JSS6 88 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 Q6ZRU5 148 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 CEP295Q9C0D2 2601 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 DAND5Q8N907 189 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 CDKN2A-AS1Q9UH64 79 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 SPTA1P02549 2419 aa3.05□□□□□ -1.92
SCAF11-212ENST00000549162 IGHV3-49A0A0A0MS15 119 aa3.04□□□□□ -1.92
SCAF11-212ENST00000549162 PRO0628Q9UI54 55 aa3.04□□□□□ -1.92
SCAF11-212ENST00000549162 CFC1BP0CG36 223 aa3.04□□□□□ -1.92
SCAF11-212ENST00000549162 CFC1P0CG37 223 aa3.04□□□□□ -1.92
SCAF11-212ENST00000549162 RPL39P62891 51 aaKnown RBP3.04□□□□□ -1.92
SCAF11-212ENST00000549162 TEX15Q9BXT5 2789 aa3.04□□□□□ -1.92
SCAF11-212ENST00000549162 DIDO1Q9BTC0 2240 aaKnown RBP3.04□□□□□ -1.92
SCAF11-212ENST00000549162 DHRS4-AS1Q9P1J3 65 aa3.04□□□□□ -1.92
SCAF11-212ENST00000549162 F8W1H4 67 aa3.03□□□□□ -1.92
SCAF11-212ENST00000549162 NKAPP1Q8N9T2 125 aa3.03□□□□□ -1.92
SCAF11-212ENST00000549162 C9orf129Q5T035 196 aaKnown RBP3.03□□□□□ -1.92
SCAF11-212ENST00000549162 ZC2HC1BQ5TFG8 222 aa3.03□□□□□ -1.92
SCAF11-212ENST00000549162 CRYBG3Q68DQ2 2970 aa3.03□□□□□ -1.92
SCAF11-212ENST00000549162 SMIM29Q86T20 159 aa3.03□□□□□ -1.92
SCAF11-212ENST00000549162 TMEM126AQ9H061 195 aa3.03□□□□□ -1.92
SCAF11-212ENST00000549162 TRGV2A0A075B6R0 118 aa3.03□□□□□ -1.92
SCAF11-212ENST00000549162 COL5A1-AS1Q5SY13 56 aa3.03□□□□□ -1.92
SCAF11-212ENST00000549162 SMIM20Q8N5G0 67 aa3.03□□□□□ -1.92
SCAF11-212ENST00000549162 SIGMAR1Q99720 223 aa3.03□□□□□ -1.92
SCAF11-212ENST00000549162 SNHG12Q9BXW3 62 aa3.03□□□□□ -1.92
SCAF11-212ENST00000549162 NHP2Q9NX24 153 aaKnown RBP3.03□□□□□ -1.92
SCAF11-212ENST00000549162 SMIM26A0A096LP01 95 aa3.02□□□□□ -1.93
SCAF11-212ENST00000549162 TRBV7-4A0A0J9YYF1 115 aa3.02□□□□□ -1.93
SCAF11-212ENST00000549162 K7EP34 96 aa3.02□□□□□ -1.93
SCAF11-212ENST00000549162 ACYP1P07311 99 aa3.02□□□□□ -1.93
SCAF11-212ENST00000549162 FN1P02751 2386 aaKnown RBP3.02□□□□□ -1.93
SCAF11-212ENST00000549162 A0A087X002 238 aa3.02□□□□□ -1.93
SCAF11-212ENST00000549162 C8orf87E5RJ46 101 aa3.02□□□□□ -1.93
SCAF11-212ENST00000549162 NDUFA12Q9UI09 145 aa3.02□□□□□ -1.93
SCAF11-212ENST00000549162 UBE2L6O14933 153 aa3.01□□□□□ -1.93
SCAF11-212ENST00000549162 WFDC10BQ8IUB3 73 aa3.01□□□□□ -1.93
SCAF11-212ENST00000549162 LINC00575Q6W349 94 aa3.01□□□□□ -1.93
SCAF11-212ENST00000549162 CLEC2BQ92478 149 aa3.01□□□□□ -1.93
SCAF11-212ENST00000549162 SND1-IT1Q9HBX3 110 aa3.01□□□□□ -1.93
SCAF11-212ENST00000549162 NDUFS5O43920 106 aa3.01□□□□□ -1.93
SCAF11-212ENST00000549162 MGPP08493 103 aa3.01□□□□□ -1.93
SCAF11-212ENST00000549162 PRO1933Q9H354 126 aa3.01□□□□□ -1.93
SCAF11-212ENST00000549162 IGHV3-74A0A0B4J1X5 117 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 SCGB1A1P11684 91 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 Q8NBF4 154 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 TRAV13-1A0A0B4J241 112 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 HIST1H4AP62805 103 aaKnown RBP3□□□□□ -1.93
SCAF11-212ENST00000549162 IMUPQ9GZP8 106 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 HYDINQ4G0P3 5121 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 A0A1B0GV50 99 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 A0A1W2PPM0 123 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 ATP5EP2Q5VTU8 51 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 PRO1854Q9UHT4 67 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 C6orf99Q4VX62 202 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 FAM19A2Q8N3H0 131 aa3□□□□□ -1.93
SCAF11-212ENST00000549162 HERC1Q15751 4861 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 CXCL6P80162 114 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 SYCNQ0VAF6 134 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 SPINK6Q6UWN8 80 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 Q6ZRX8 168 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 RBM12B-AS1Q9P1G2 102 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 RTTNQ86VV8 2226 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 ICE1Q9Y2F5 2266 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.99□□□□□ -1.93
SCAF11-212ENST00000549162 IGKV2-29A2NJV5 120 aaPredicted RBP2.99□□□□□ -1.93
SCAF11-212ENST00000549162 LGALS3P17931 250 aaKnown RBP2.99□□□□□ -1.93
SCAF11-212ENST00000549162 PRR4Q16378 134 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 TEN1Q86WV5 123 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 Q8N1X5 172 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 SPTBN2O15020 2390 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 HECTD1Q9ULT8 2610 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 KNL1Q8NG31 2342 aa2.99□□□□□ -1.93
SCAF11-212ENST00000549162 KRTAP29-1A8MX34 341 aaPredicted RBP2.99□□□□□ -1.93
SCAF11-212ENST00000549162 FXYD7P58549 80 aa2.98□□□□□ -1.93
SCAF11-212ENST00000549162 Q8NDZ9 215 aa2.98□□□□□ -1.93
SCAF11-212ENST00000549162 ARID1AO14497 2285 aa2.98□□□□□ -1.93
SCAF11-212ENST00000549162 HERC2O95714 4834 aa2.98□□□□□ -1.93
SCAF11-212ENST00000549162 NOTCH2NLQ7Z3S9 236 aa2.98□□□□□ -1.93
SCAF11-212ENST00000549162 LINC00269Q8N2A0 174 aa2.98□□□□□ -1.93
SCAF11-212ENST00000549162 TMSB15BA0A087X1C1 80 aa2.98□□□□□ -1.93
SCAF11-212ENST00000549162 ZNF706Q9Y5V0 76 aaPredicted RBP2.98□□□□□ -1.93
SCAF11-212ENST00000549162 SPTAN1Q13813 2472 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms