RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 JOSD1Q15040 202 aaPredicted RBP6.18□□□□□ -1.42
BEST3-208ENST00000547208 TRAPPC1Q9Y5R8 145 aa6.18□□□□□ -1.42
BEST3-208ENST00000547208 IGLV5-39A0A0G2JS06 123 aa6.17□□□□□ -1.42
BEST3-208ENST00000547208 M0R143 59 aa6.17□□□□□ -1.42
BEST3-208ENST00000547208 NUPR1O60356 82 aa6.17□□□□□ -1.42
BEST3-208ENST00000547208 ZNF861PO60384 105 aa6.17□□□□□ -1.42
BEST3-208ENST00000547208 ZNF22P17026 224 aaPredicted RBP6.17□□□□□ -1.42
BEST3-208ENST00000547208 PMCHL1Q16048 86 aa6.17□□□□□ -1.42
BEST3-208ENST00000547208 MRPL55Q7Z7F7 128 aaKnown RBP6.17□□□□□ -1.42
BEST3-208ENST00000547208 IGLV1-50A0A075B6I6 118 aa6.16□□□□□ -1.42
BEST3-208ENST00000547208 IGLV5-37A0A075B6J1 123 aa6.16□□□□□ -1.42
BEST3-208ENST00000547208 DLEU1O43261 78 aa6.16□□□□□ -1.42
BEST3-208ENST00000547208 HBDP02042 147 aa6.16□□□□□ -1.42
BEST3-208ENST00000547208 H3BRM9 83 aa6.15□□□□□ -1.42
BEST3-208ENST00000547208 LINC00167Q96N53 147 aa6.15□□□□□ -1.42
BEST3-208ENST00000547208 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.42
BEST3-208ENST00000547208 PRO1933Q9H354 126 aa6.15□□□□□ -1.42
BEST3-208ENST00000547208 BCE1O60756 84 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 HIST1H2BKO60814 126 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 ATP5LO75964 103 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 HIST1H2BJP06899 126 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 HIST1H2BOP23527 126 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 HIST1H2BBP33778 126 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 HIST1H2BDP58876 126 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 HIST1H2BCP62807 126 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 HIST2H2BEQ16778 126 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 C21orf62-AS1Q17RA5 79 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.14□□□□□ -1.43
BEST3-208ENST00000547208 HIST1H2BHQ93079 126 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 HIST1H2BNQ99877 126 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 HIST1H2BMQ99879 126 aa6.14□□□□□ -1.43
BEST3-208ENST00000547208 C11orf86A6NJI1 115 aa6.13□□□□□ -1.43
BEST3-208ENST00000547208 RPL37AP8A6NKH3 93 aa6.13□□□□□ -1.43
BEST3-208ENST00000547208 COA6Q5JTJ3 125 aaKnown RBP6.13□□□□□ -1.43
BEST3-208ENST00000547208 KRTAP13-1Q8IUC0 172 aa6.13□□□□□ -1.43
BEST3-208ENST00000547208 MUC2Q02817 5179 aa6.12□□□□□ -1.43
BEST3-208ENST00000547208 GAGE10A6NGK3 116 aa6.12□□□□□ -1.43
BEST3-208ENST00000547208 FABP4P15090 132 aa6.12□□□□□ -1.43
BEST3-208ENST00000547208 PFN2P35080 140 aa6.12□□□□□ -1.43
BEST3-208ENST00000547208 BAGE3Q86Y29 109 aa6.12□□□□□ -1.43
BEST3-208ENST00000547208 HIST1H2BLQ99880 126 aa6.12□□□□□ -1.43
BEST3-208ENST00000547208 ERG28Q9UKR5 140 aa6.12□□□□□ -1.43
BEST3-208ENST00000547208 A0A087X002 238 aa6.11□□□□□ -1.43
BEST3-208ENST00000547208 VPREB1P12018 145 aa6.11□□□□□ -1.43
BEST3-208ENST00000547208 RPL13AP40429 203 aaKnown RBP6.11□□□□□ -1.43
BEST3-208ENST00000547208 Q8NDZ9 215 aa6.11□□□□□ -1.43
BEST3-208ENST00000547208 SVIPQ8NHG7 77 aa6.11□□□□□ -1.43
BEST3-208ENST00000547208 ZNF625Q96I27 306 aaPredicted RBP6.11□□□□□ -1.43
BEST3-208ENST00000547208 SNHG12Q9BXW3 62 aa6.11□□□□□ -1.43
BEST3-208ENST00000547208 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
BEST3-208ENST00000547208 SND1-IT1Q9HBX3 110 aa6.11□□□□□ -1.43
BEST3-208ENST00000547208 RPL28P46779 137 aaKnown RBP6.1□□□□□ -1.43
BEST3-208ENST00000547208 COX17Q14061 63 aa6.1□□□□□ -1.43
BEST3-208ENST00000547208 TMEM170BQ5T4T1 132 aa6.1□□□□□ -1.43
BEST3-208ENST00000547208 NKAPP1Q8N9T2 125 aa6.1□□□□□ -1.43
BEST3-208ENST00000547208 CHCHD1Q96BP2 118 aaKnown RBP6.1□□□□□ -1.43
BEST3-208ENST00000547208 TRGC2P03986 189 aa6.09□□□□□ -1.43
BEST3-208ENST00000547208 CHTOPQ9Y3Y2 248 aaKnown RBP6.09□□□□□ -1.43
BEST3-208ENST00000547208 IGKV2-28A0A075B6P5 120 aa6.08□□□□□ -1.44
BEST3-208ENST00000547208 TRAV12-1A0A0B4J245 112 aa6.08□□□□□ -1.44
BEST3-208ENST00000547208 TMEM223A0PJW6 202 aa6.08□□□□□ -1.44
BEST3-208ENST00000547208 IGKV2D-28P01615 120 aa6.08□□□□□ -1.44
BEST3-208ENST00000547208 IFI27L1Q96BM0 104 aa6.08□□□□□ -1.44
BEST3-208ENST00000547208 SFTA2Q6UW10 78 aa6.07□□□□□ -1.44
BEST3-208ENST00000547208 FAT4Q6V0I7 4981 aa6.06□□□□□ -1.44
BEST3-208ENST00000547208 TMEM238C9JI98 176 aa6.06□□□□□ -1.44
BEST3-208ENST00000547208 LINC00310P59036 64 aa6.06□□□□□ -1.44
BEST3-208ENST00000547208 KRTAP13-2Q52LG2 175 aa6.06□□□□□ -1.44
BEST3-208ENST00000547208 ANAPC11Q9NYG5 84 aa6.06□□□□□ -1.44
BEST3-208ENST00000547208 M0R378 163 aa6.05□□□□□ -1.44
BEST3-208ENST00000547208 CRYGAP11844 174 aa6.05□□□□□ -1.44
BEST3-208ENST00000547208 UBE2AP49459 152 aa6.05□□□□□ -1.44
BEST3-208ENST00000547208 PRLHP81277 87 aa6.05□□□□□ -1.44
BEST3-208ENST00000547208 RPL24P83731 157 aaKnown RBP6.05□□□□□ -1.44
BEST3-208ENST00000547208 COL5A1-AS1Q5SY13 56 aa6.05□□□□□ -1.44
BEST3-208ENST00000547208 FAM19A2Q8N3H0 131 aa6.05□□□□□ -1.44
BEST3-208ENST00000547208 TMEM126AQ9H061 195 aa6.05□□□□□ -1.44
BEST3-208ENST00000547208 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
BEST3-208ENST00000547208 MIEN1Q9BRT3 115 aa6.04□□□□□ -1.44
BEST3-208ENST00000547208 HSBP1O75506 76 aa6.03□□□□□ -1.44
BEST3-208ENST00000547208 LINC00158P58513 81 aa6.03□□□□□ -1.44
BEST3-208ENST00000547208 FAM229BQ4G0N7 80 aa6.03□□□□□ -1.44
BEST3-208ENST00000547208 TYMSOSQ8TAI1 123 aa6.03□□□□□ -1.44
BEST3-208ENST00000547208 A0A0U1RRA0 63 aa6.02□□□□□ -1.45
BEST3-208ENST00000547208 C20orf202A1L168 122 aa6.02□□□□□ -1.45
BEST3-208ENST00000547208 HSBP1L1C9JCN9 74 aa6.02□□□□□ -1.45
BEST3-208ENST00000547208 TSPAN13O95857 204 aa6.02□□□□□ -1.45
BEST3-208ENST00000547208 SMIM13P0DJ93 91 aa6.02□□□□□ -1.45
BEST3-208ENST00000547208 PRR4Q16378 134 aa6.02□□□□□ -1.45
BEST3-208ENST00000547208 FAM19A1Q7Z5A9 133 aa6.02□□□□□ -1.45
BEST3-208ENST00000547208 SERF1AO75920 110 aa6.01□□□□□ -1.45
BEST3-208ENST00000547208 SCGB1D1O95968 90 aa6.01□□□□□ -1.45
BEST3-208ENST00000547208 TSPEAR-AS2P59090 65 aa6.01□□□□□ -1.45
BEST3-208ENST00000547208 HERV-K104P63124 156 aa6□□□□□ -1.45
BEST3-208ENST00000547208 MIR7-3HGQ8N6C7 128 aa6□□□□□ -1.45
BEST3-208ENST00000547208 PLEKHB2Q96CS7 222 aa6□□□□□ -1.45
BEST3-208ENST00000547208 H0Y8G0 127 aa5.99□□□□□ -1.45
BEST3-208ENST00000547208 LEPROTL1O95214 131 aa5.99□□□□□ -1.45
BEST3-208ENST00000547208 NDUFA12Q9UI09 145 aa5.99□□□□□ -1.45
BEST3-208ENST00000547208 KRTAP4-16G5E9R7 235 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms