RNA–Protein interactions for RNA: ENST00000544561.5

MDM2-232, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-232ENST00000544561 NCOA2Q15596 1464 aa0.21□□□□□ -2.38
MDM2-232ENST00000544561 PPRC1Q5VV67 1664 aaKnown RBP0.21□□□□□ -2.38
MDM2-232ENST00000544561 MYH4Q9Y623 1939 aa0.21□□□□□ -2.38
MDM2-232ENST00000544561 CELSR2Q9HCU4 2923 aa0.2□□□□□ -2.38
MDM2-232ENST00000544561 ZNF292O60281 2723 aa0.2□□□□□ -2.38
MDM2-232ENST00000544561 RGPD2P0DJD1 1756 aa0.2□□□□□ -2.38
MDM2-232ENST00000544561 COX7BP24311 80 aa0.2□□□□□ -2.38
MDM2-232ENST00000544561 Q5BKY6 102 aa0.2□□□□□ -2.38
MDM2-232ENST00000544561 DEFB121Q5J5C9 76 aa0.2□□□□□ -2.38
MDM2-232ENST00000544561 FMN2Q9NZ56 1722 aa0.2□□□□□ -2.38
MDM2-232ENST00000544561 LRRC9Q6ZRR7 1453 aa0.2□□□□□ -2.38
MDM2-232ENST00000544561 AHCTF1Q8WYP5 2266 aa0.2□□□□□ -2.38
MDM2-232ENST00000544561 CHD9Q3L8U1 2897 aa0.2□□□□□ -2.38
MDM2-232ENST00000544561 GOLGA4Q13439 2230 aaKnown RBP0.19□□□□□ -2.38
MDM2-232ENST00000544561 CFAP74Q9C0B2 1584 aa0.19□□□□□ -2.38
MDM2-232ENST00000544561 LRRC37AA6NMS7 1700 aa0.19□□□□□ -2.38
MDM2-232ENST00000544561 CPSF4LA6NMK7 179 aaKnown RBP0.19□□□□□ -2.38
MDM2-232ENST00000544561 PHGR1C9JFL3 82 aa0.19□□□□□ -2.38
MDM2-232ENST00000544561 CFDP00746 253 aaPredicted RBP0.19□□□□□ -2.38
MDM2-232ENST00000544561 IFI6P09912 130 aa0.19□□□□□ -2.38
MDM2-232ENST00000544561 C18orf32Q8TCD1 76 aa0.19□□□□□ -2.38
MDM2-232ENST00000544561 GAFA1Q96PS6 74 aa0.19□□□□□ -2.38
MDM2-232ENST00000544561 MRPL34Q9BQ48 92 aaKnown RBP0.19□□□□□ -2.38
MDM2-232ENST00000544561 USF3Q68DE3 2245 aa0.19□□□□□ -2.38
MDM2-232ENST00000544561 PIK3C2BO00750 1634 aa0.19□□□□□ -2.38
MDM2-232ENST00000544561 MUC5ACP98088 5654 aa0.19□□□□□ -2.38
MDM2-232ENST00000544561 CACNA1EQ15878 2313 aa0.19□□□□□ -2.38
MDM2-232ENST00000544561 ABCA8O94911 1581 aa0.19□□□□□ -2.38
MDM2-232ENST00000544561 SUPT6HQ7KZ85 1726 aaKnown RBP0.18□□□□□ -2.38
MDM2-232ENST00000544561 PKD1L3Q7Z443 1732 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 LRRIQ1Q96JM4 1722 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 URB2Q14146 1524 aaKnown RBP0.18□□□□□ -2.38
MDM2-232ENST00000544561 TNCP24821 2201 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 ZFYVE26Q68DK2 2539 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
MDM2-232ENST00000544561 SPTY2D1-AS1A0A0U1RR47 76 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 DEFB109BQ30KR1 87 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 H1FX-AS1Q4G0G2 97 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 WFDC9Q8NEX5 89 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 DEFB105AQ8NG35 78 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 USMG5Q96IX5 58 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 APLNQ9ULZ1 77 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 URB1O60287 2271 aaKnown RBP0.18□□□□□ -2.38
MDM2-232ENST00000544561 GVINP1Q7Z2Y8 2422 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 FSIP2Q5CZC0 6907 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 ABCC1P33527 1531 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 PLCE1Q9P212 2302 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 TNXBP22105 4242 aa0.18□□□□□ -2.38
MDM2-232ENST00000544561 CD163L1Q9NR16 1453 aa0.17□□□□□ -2.38
MDM2-232ENST00000544561 IQGAP3Q86VI3 1631 aa0.17□□□□□ -2.38
MDM2-232ENST00000544561 I3L3M4 83 aa0.17□□□□□ -2.38
MDM2-232ENST00000544561 POLR1AO95602 1720 aaPredicted RBP0.17□□□□□ -2.38
MDM2-232ENST00000544561 SMIM13P0DJ93 91 aa0.17□□□□□ -2.38
MDM2-232ENST00000544561 HMGA1P17096 107 aaKnown RBP0.17□□□□□ -2.38
MDM2-232ENST00000544561 ANKARQ7Z5J8 1434 aa0.17□□□□□ -2.38
MDM2-232ENST00000544561 DOT1LQ8TEK3 1739 aa0.17□□□□□ -2.38
MDM2-232ENST00000544561 FXYD6Q9H0Q3 95 aa0.17□□□□□ -2.38
MDM2-232ENST00000544561 MAGI3Q5TCQ9 1506 aa0.17□□□□□ -2.38
MDM2-232ENST00000544561 SPTBN1Q01082 2364 aaKnown RBP0.17□□□□□ -2.38
MDM2-232ENST00000544561 ANKRD36A6QL64 1941 aa0.17□□□□□ -2.38
MDM2-232ENST00000544561 LTN1O94822 1766 aa0.17□□□□□ -2.38
MDM2-232ENST00000544561 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.16□□□□□ -2.381e-7■■■■□ 19.4
MDM2-232ENST00000544561 CCDC88BA6NC98 1476 aa0.16□□□□□ -2.38
MDM2-232ENST00000544561 CCDC141Q6ZP82 1450 aa0.16□□□□□ -2.38
MDM2-232ENST00000544561 QSER1Q2KHR3 1735 aa0.16□□□□□ -2.38
MDM2-232ENST00000544561 MACF1Q9UPN3 7388 aaKnown RBP0.16□□□□□ -2.38
MDM2-232ENST00000544561 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
MDM2-232ENST00000544561 SPINK1P00995 79 aa0.16□□□□□ -2.38
MDM2-232ENST00000544561 COX8AP10176 69 aa0.16□□□□□ -2.38
MDM2-232ENST00000544561 ATP5EP2Q5VTU8 51 aa0.16□□□□□ -2.38
MDM2-232ENST00000544561 CHD6Q8TD26 2715 aa0.16□□□□□ -2.38
MDM2-232ENST00000544561 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
MDM2-232ENST00000544561 LRP1Q07954 4544 aaKnown RBP0.15□□□□□ -2.38
MDM2-232ENST00000544561 KMT2DO14686 5537 aa0.15□□□□□ -2.38
MDM2-232ENST00000544561 TSC2P49815 1807 aa0.15□□□□□ -2.38
MDM2-232ENST00000544561 PTPRZ1P23471 2315 aaPredicted RBP0.15□□□□□ -2.38
MDM2-232ENST00000544561 AKAP6Q13023 2319 aa0.15□□□□□ -2.38
MDM2-232ENST00000544561 PTPRQQ9UMZ3 2332 aa0.15□□□□□ -2.38
MDM2-232ENST00000544561 A0A087WXM4 84 aa0.15□□□□□ -2.39
MDM2-232ENST00000544561 LCE6AA0A183 80 aa0.15□□□□□ -2.39
MDM2-232ENST00000544561 PRM1P04553 51 aa0.15□□□□□ -2.39
MDM2-232ENST00000544561 IFI27P40305 119 aaPredicted RBP0.15□□□□□ -2.39
MDM2-232ENST00000544561 NREPQ16612 68 aa0.15□□□□□ -2.39
MDM2-232ENST00000544561 U3KQA8 63 aa0.15□□□□□ -2.39
MDM2-232ENST00000544561 DNMBPQ6XZF7 1577 aa0.15□□□□□ -2.39
MDM2-232ENST00000544561 PREX1Q8TCU6 1659 aa0.14□□□□□ -2.39
MDM2-232ENST00000544561 TENM4Q6N022 2769 aa0.14□□□□□ -2.39
MDM2-232ENST00000544561 UGGT2Q9NYU1 1516 aa0.14□□□□□ -2.39
MDM2-232ENST00000544561 PTPN23Q9H3S7 1636 aa0.14□□□□□ -2.39
MDM2-232ENST00000544561 UNC79Q9P2D8 2635 aa0.14□□□□□ -2.39
MDM2-232ENST00000544561 MYO5CQ9NQX4 1742 aa0.14□□□□□ -2.39
MDM2-232ENST00000544561 UMAD1C9J7I0 102 aa0.14□□□□□ -2.39
MDM2-232ENST00000544561 NDUFB1O75438 58 aa0.14□□□□□ -2.39
MDM2-232ENST00000544561 NDUFA3O95167 84 aa0.14□□□□□ -2.39
MDM2-232ENST00000544561 NWD1Q149M9 1564 aa0.14□□□□□ -2.39
MDM2-232ENST00000544561 ARFGEF2Q9Y6D5 1785 aa0.14□□□□□ -2.39
MDM2-232ENST00000544561 CLIP1P30622 1438 aa0.13□□□□□ -2.39
MDM2-232ENST00000544561 KIF20BQ96Q89 1820 aa0.13□□□□□ -2.39
MDM2-232ENST00000544561 DEFA5Q01523 94 aa0.13□□□□□ -2.39
MDM2-232ENST00000544561 HEPN1Q6WQI6 88 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms