RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 HIST1H2BAQ96A08 127 aa2.86□□□□□ -1.95
NPIPB4-219ENST00000543660 C14orf144Q96I85 54 aa2.86□□□□□ -1.95
NPIPB4-219ENST00000543660 SPANXDQ9BXN6 97 aa2.86□□□□□ -1.95
NPIPB4-219ENST00000543660 OTORQ9NRC9 128 aa2.86□□□□□ -1.95
NPIPB4-219ENST00000543660 NCR2O95944 276 aa2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 CFC1BP0CG36 223 aa2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 CFC1P0CG37 223 aa2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 FAUP35544 74 aaKnown RBP2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 TSPEAR-AS2P59090 65 aa2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 SYCNQ0VAF6 134 aa2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 MRPL51Q4U2R6 128 aaKnown RBP2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 OCIAD2Q56VL3 154 aa2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 C1orf137Q5JT78 98 aa2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 CEND1Q8N111 149 aa2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 DERL1Q9BUN8 251 aa2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 Q9H521 79 aa2.85□□□□□ -1.95
NPIPB4-219ENST00000543660 SSPOA2VEC9 5147 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 IGLV4-60A0A075B6I1 120 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 GVQW2A0A096LPI5 108 aaPredicted RBP2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 TRAV1-1A0A0B4J248 108 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 IGHV1-58A0A0C4DH39 117 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 A0A1W2PNN7 141 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 C1orf196B1AJZ1 125 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 H3BMG7 143 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 H3BVH4 76 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 ZNF73O43830 326 aaPredicted RBP2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 MT-ND6P03923 174 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 IGLV7-43P04211 117 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 FABP2P12104 132 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 FAM74A1Q5RGS3 127 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 CARD19Q96LW7 228 aa2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 PSMG3Q9BT73 122 aaPredicted RBP2.84□□□□□ -1.95
NPIPB4-219ENST00000543660 TRBV25-1A0A075B6N4 114 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 A0A087WXM4 84 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 TRBV7-6A0A0J9YX20 115 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 TRBV6-1A0A0K0K1D8 114 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 FAM168BA1KXE4 195 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 A6NED7 52 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 J3QQQ9 107 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 M0R378 163 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 SLC25A20O43772 301 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 SH2D1AO60880 128 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 ARMS2P0C7Q2 107 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 UBE2D1P51668 147 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 TMBIM6P55061 237 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 UBE2BP63146 152 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 MEF2BQ02080 365 aaPredicted RBP2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 IQCJQ1A5X6 159 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 C9orf129Q5T035 196 aaKnown RBP2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 AMMECR1LQ6DCA0 310 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 EIF5AL1Q6IS14 154 aaKnown RBP2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 TOMM5Q8N4H5 51 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 MIR7-3HGQ8N6C7 128 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 TYMSOSQ8TAI1 123 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 KRTAP4-1Q9BYQ7 146 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 OSTCQ9NRP0 149 aa2.83□□□□□ -1.96
NPIPB4-219ENST00000543660 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 USH2AO75445 5202 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 TRBV24-1A0A075B6N3 115 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 TRAV13-1A0A0B4J241 112 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 IGHV1-24A0A0C4DH33 117 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 TCRAP04437 139 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 TLX1NBP0CAT3 122 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 RPL35P42766 123 aaKnown RBP2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 HBBP68871 147 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 KHDC3LQ587J8 217 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 PHF5AQ7RTV0 110 aaKnown RBP2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 DEDD2Q8WXF8 326 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 AQP10Q96PS8 301 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
NPIPB4-219ENST00000543660 LEPROTO15243 131 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 NDUFB6O95139 128 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 TCL1BO95988 128 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 MT-ND4LP03901 98 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 IGLC6P0CF74 106 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 CRIP1P50238 77 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 AKR1D1P51857 326 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 ZNF56Q15929 161 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 LINC01554Q52M75 96 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 C9orf116Q5BN46 136 aaPredicted RBP2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 C10orf91Q5T1B1 145 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 HIST3H2BBQ8N257 126 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 C5orf17Q8NAS9 161 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 LINC00526Q96FQ7 95 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 SCGB3A1Q96QR1 104 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 TMEM191AQ9H0A3 160 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 NIT2Q9NQR4 276 aa2.81□□□□□ -1.96
NPIPB4-219ENST00000543660 LOC107984640A0A0U1RRK4 108 aa2.8□□□□□ -1.96
NPIPB4-219ENST00000543660 HIST1H2BKO60814 126 aa2.8□□□□□ -1.96
NPIPB4-219ENST00000543660 NPYP01303 97 aa2.8□□□□□ -1.96
NPIPB4-219ENST00000543660 HIST1H2BJP06899 126 aa2.8□□□□□ -1.96
NPIPB4-219ENST00000543660 CRYGAP11844 174 aa2.8□□□□□ -1.96
NPIPB4-219ENST00000543660 TPT1P13693 172 aaKnown RBP2.8□□□□□ -1.96
NPIPB4-219ENST00000543660 C3orf22Q8N5N4 141 aa2.8□□□□□ -1.96
NPIPB4-219ENST00000543660 HIST1H2BLQ99880 126 aa2.8□□□□□ -1.96
NPIPB4-219ENST00000543660 RETNLBQ9BQ08 111 aa2.8□□□□□ -1.96
NPIPB4-219ENST00000543660 EPDR1Q9UM22 224 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms