RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
CDH4-201ENST00000543233 IGKV2-28A0A075B6P5 120 aa7.93□□□□□ -1.14
CDH4-201ENST00000543233 IGKV2D-28P01615 120 aa7.93□□□□□ -1.14
CDH4-201ENST00000543233 WFDC10AQ9H1F0 79 aa7.93□□□□□ -1.14
CDH4-201ENST00000543233 ATRQ13535 2644 aa7.93□□□□□ -1.14
CDH4-201ENST00000543233 Q6ZSN1 163 aa7.92□□□□□ -1.14
CDH4-201ENST00000543233 F8P00451 2351 aa7.92□□□□□ -1.14
CDH4-201ENST00000543233 IBA57-AS1B1ANH7 110 aa7.92□□□□□ -1.14
CDH4-201ENST00000543233 PRYO14603 147 aa7.92□□□□□ -1.14
CDH4-201ENST00000543233 SMR3AQ99954 134 aa7.92□□□□□ -1.14
CDH4-201ENST00000543233 BCE1O60756 84 aa7.92□□□□□ -1.14
CDH4-201ENST00000543233 DEFB114Q30KQ6 69 aa7.92□□□□□ -1.14
CDH4-201ENST00000543233 TRBV7-4A0A0J9YYF1 115 aa7.91□□□□□ -1.14
CDH4-201ENST00000543233 TRBV10-1A0A0K0K1A3 114 aa7.91□□□□□ -1.14
CDH4-201ENST00000543233 C4orf3Q8WVX3 66 aa7.91□□□□□ -1.14
CDH4-201ENST00000543233 VWFP04275 2813 aa7.91□□□□□ -1.14
CDH4-201ENST00000543233 HIVEP1P15822 2718 aa7.9□□□□□ -1.14
CDH4-201ENST00000543233 SMIM1B2RUZ4 78 aa7.9□□□□□ -1.14
CDH4-201ENST00000543233 APOC4P55056 127 aa7.9□□□□□ -1.14
CDH4-201ENST00000543233 CCL24O00175 119 aa7.9□□□□□ -1.14
CDH4-201ENST00000543233 IGKV3OR2-268A0A0C4DH90 116 aa7.89□□□□□ -1.15
CDH4-201ENST00000543233 Q6ZVQ6 151 aa7.89□□□□□ -1.15
CDH4-201ENST00000543233 TRGV1A0A0A0MS02 117 aa7.89□□□□□ -1.15
CDH4-201ENST00000543233 A8MU10 97 aa7.89□□□□□ -1.15
CDH4-201ENST00000543233 ODF3L2Q3SX64 289 aa7.89□□□□□ -1.15
CDH4-201ENST00000543233 LINC00242Q5T6M2 205 aa7.88□□□□□ -1.15
CDH4-201ENST00000543233 CHCHD7Q9BUK0 85 aa7.88□□□□□ -1.15
CDH4-201ENST00000543233 TMEM256-PLSCR3K7ERE1 68 aa7.88□□□□□ -1.15
CDH4-201ENST00000543233 IGLV5-39A0A0G2JS06 123 aa7.87□□□□□ -1.15
CDH4-201ENST00000543233 M0R2N4 97 aa7.87□□□□□ -1.15
CDH4-201ENST00000543233 BPY2O14599 106 aa7.87□□□□□ -1.15
CDH4-201ENST00000543233 INSP01308 110 aa7.87□□□□□ -1.15
CDH4-201ENST00000543233 KTN1-AS1Q86SY8 53 aa7.87□□□□□ -1.15
CDH4-201ENST00000543233 NANOS2P60321 138 aaKnown RBP7.87□□□□□ -1.15
CDH4-201ENST00000543233 Q6ZRP5 223 aa7.87□□□□□ -1.15
CDH4-201ENST00000543233 COX7B2Q8TF08 81 aa7.87□□□□□ -1.15
CDH4-201ENST00000543233 HIGD2AQ9BW72 106 aa7.87□□□□□ -1.15
CDH4-201ENST00000543233 CYSRT1A8MQ03 144 aa7.86□□□□□ -1.15
CDH4-201ENST00000543233 H3BS24 57 aa7.86□□□□□ -1.15
CDH4-201ENST00000543233 CCL18P55774 89 aa7.86□□□□□ -1.15
CDH4-201ENST00000543233 PRR4Q16378 134 aa7.86□□□□□ -1.15
CDH4-201ENST00000543233 LINC01006Q8NI28 216 aa7.85□□□□□ -1.15
CDH4-201ENST00000543233 TENM1Q9UKZ4 2725 aa7.85□□□□□ -1.15
CDH4-201ENST00000543233 IGLV5-45A0A087WSX0 123 aa7.84□□□□□ -1.15
CDH4-201ENST00000543233 A8MUN3 132 aa7.84□□□□□ -1.15
CDH4-201ENST00000543233 Q8N9L7 120 aa7.84□□□□□ -1.15
CDH4-201ENST00000543233 TRAV22A0A0B4J277 110 aa7.83□□□□□ -1.16
CDH4-201ENST00000543233 NOP10Q9NPE3 64 aaKnown RBP7.83□□□□□ -1.16
CDH4-201ENST00000543233 Q8N814 137 aa7.83□□□□□ -1.16
CDH4-201ENST00000543233 UBE2BP63146 152 aa7.83□□□□□ -1.16
CDH4-201ENST00000543233 Q6ZTC4 211 aa7.83□□□□□ -1.16
CDH4-201ENST00000543233 Q6ZQT0 140 aa7.81□□□□□ -1.16
CDH4-201ENST00000543233 ANK3Q12955 4377 aaKnown RBP7.81□□□□□ -1.16
CDH4-201ENST00000543233 hDV103S1A0JD37 113 aa7.81□□□□□ -1.16
CDH4-201ENST00000543233 KRTAP1-1Q07627 177 aa7.81□□□□□ -1.16
CDH4-201ENST00000543233 TRGV2A0A075B6R0 118 aa7.8□□□□□ -1.16
CDH4-201ENST00000543233 M0R378 163 aa7.8□□□□□ -1.16
CDH4-201ENST00000543233 C1orf64Q8NEQ6 169 aa7.8□□□□□ -1.16
CDH4-201ENST00000543233 Q1T7F1 81 aa7.8□□□□□ -1.16
CDH4-201ENST00000543233 NTM-AS1Q6ZSK4 140 aa7.8□□□□□ -1.16
CDH4-201ENST00000543233 NSD1Q96L73 2696 aaPredicted RBP7.79□□□□□ -1.16
CDH4-201ENST00000543233 CHKB-CPT1BH3BT56 60 aa7.79□□□□□ -1.16
CDH4-201ENST00000543233 FAM19A3Q7Z5A8 133 aa7.79□□□□□ -1.16
CDH4-201ENST00000543233 LOC100131303A0A0U1RQF7 123 aa7.79□□□□□ -1.16
CDH4-201ENST00000543233 PRR3P79522 188 aaKnown RBP7.79□□□□□ -1.16
CDH4-201ENST00000543233 CXCL6P80162 114 aa7.79□□□□□ -1.16
CDH4-201ENST00000543233 SYCNQ0VAF6 134 aa7.78□□□□□ -1.16
CDH4-201ENST00000543233 CELA1Q9UNI1 258 aa7.78□□□□□ -1.16
CDH4-201ENST00000543233 LINC00588Q9Y4M8 146 aa7.77□□□□□ -1.17
CDH4-201ENST00000543233 TRRAPQ9Y4A5 3859 aa7.77□□□□□ -1.17
CDH4-201ENST00000543233 ZNF73O43830 326 aaPredicted RBP7.77□□□□□ -1.17
CDH4-201ENST00000543233 DEFB130BP0DP73 79 aa7.77□□□□□ -1.17
CDH4-201ENST00000543233 DEFB130AP0DP74 79 aa7.77□□□□□ -1.17
CDH4-201ENST00000543233 LINC00269Q8N2A0 174 aa7.77□□□□□ -1.17
CDH4-201ENST00000543233 TRBV6-4A0A1B0GX49 114 aa7.76□□□□□ -1.17
CDH4-201ENST00000543233 A8MTW9 85 aa7.76□□□□□ -1.17
CDH4-201ENST00000543233 FAM30AQ9NZY2 134 aa7.76□□□□□ -1.17
CDH4-201ENST00000543233 CD164L2Q6UWJ8 174 aa7.75□□□□□ -1.17
CDH4-201ENST00000543233 UBE2L6O14933 153 aa7.75□□□□□ -1.17
CDH4-201ENST00000543233 C6orf99Q4VX62 202 aa7.75□□□□□ -1.17
CDH4-201ENST00000543233 GIG44P09565 113 aaPredicted RBP7.74□□□□□ -1.17
CDH4-201ENST00000543233 TRGV4A0A0C4DH28 118 aa7.74□□□□□ -1.17
CDH4-201ENST00000543233 A0A096LPF7 62 aa7.74□□□□□ -1.17
CDH4-201ENST00000543233 K7EQD1 137 aa7.74□□□□□ -1.17
CDH4-201ENST00000543233 DEFB4AO15263 64 aa7.74□□□□□ -1.17
CDH4-201ENST00000543233 UBE2AP49459 152 aa7.74□□□□□ -1.17
CDH4-201ENST00000543233 SPATA3Q8NHX4 192 aa7.74□□□□□ -1.17
CDH4-201ENST00000543233 ERC2-IT1O76042 136 aa7.73□□□□□ -1.17
CDH4-201ENST00000543233 C8orf87E5RJ46 101 aa7.73□□□□□ -1.17
CDH4-201ENST00000543233 LYRM9A8MSI8 78 aa7.72□□□□□ -1.17
CDH4-201ENST00000543233 NDUFS5O43920 106 aa7.72□□□□□ -1.17
CDH4-201ENST00000543233 KRTAP10-3P60369 221 aa7.72□□□□□ -1.17
CDH4-201ENST00000543233 INAFM1C9JVW0 142 aa7.72□□□□□ -1.17
CDH4-201ENST00000543233 HCG22E2RYF7 251 aa7.72□□□□□ -1.17
CDH4-201ENST00000543233 IGLV1-51P01701 117 aa7.72□□□□□ -1.17
CDH4-201ENST00000543233 C16orf90A8MZG2 172 aa7.71□□□□□ -1.18
CDH4-201ENST00000543233 LY6G6DO95868 133 aa7.71□□□□□ -1.18
CDH4-201ENST00000543233 LINC00167Q96N53 147 aa7.71□□□□□ -1.18
CDH4-201ENST00000543233 STAB1Q9NY15 2570 aa7.71□□□□□ -1.18
CDH4-201ENST00000543233 LOC110117498A0A087WWA1 95 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms