RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 TULP4Q9NRJ4 1543 aa1.3□□□□□ -2.2
GTF2H3-210ENST00000543005 PREX2Q70Z35 1606 aa1.29□□□□□ -2.2
GTF2H3-210ENST00000543005 HMGA1P17096 107 aaKnown RBP1.29□□□□□ -2.2
GTF2H3-210ENST00000543005 DEFB112Q30KQ8 113 aa1.29□□□□□ -2.2
GTF2H3-210ENST00000543005 Q6ZSA8 131 aa1.29□□□□□ -2.2
GTF2H3-210ENST00000543005 RP1L1Q8IWN7 2480 aaPredicted RBP1.29□□□□□ -2.2
GTF2H3-210ENST00000543005 QSER1Q2KHR3 1735 aa1.29□□□□□ -2.2
GTF2H3-210ENST00000543005 DOT1LQ8TEK3 1739 aa1.29□□□□□ -2.2
GTF2H3-210ENST00000543005 H3BVH4 76 aa1.28□□□□□ -2.2
GTF2H3-210ENST00000543005 DIP2AQ14689 1571 aa1.28□□□□□ -2.2
GTF2H3-210ENST00000543005 NHSQ6T4R5 1651 aa1.28□□□□□ -2.2
GTF2H3-210ENST00000543005 ANKRD17O75179 2603 aaKnown RBP1.27□□□□□ -2.21
GTF2H3-210ENST00000543005 PREX1Q8TCU6 1659 aa1.27□□□□□ -2.21
GTF2H3-210ENST00000543005 ANGP03950 147 aaKnown RBP1.27□□□□□ -2.21
GTF2H3-210ENST00000543005 FXYD6P3P58550 94 aa1.27□□□□□ -2.21
GTF2H3-210ENST00000543005 LRRC37AA6NMS7 1700 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 RICTORQ6R327 1708 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 JMJD1CQ15652 2540 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 COL6A6A6NMZ7 2263 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 FXYD6-FXYD2A0A087WZ82 144 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 NREPQ16612 68 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 WFDC9Q8NEX5 89 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 GAFA1Q96PS6 74 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 C10orf95Q9H7T3 257 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 FMN2Q9NZ56 1722 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 ROS1P08922 2347 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 ABCA6Q8N139 1617 aa1.26□□□□□ -2.21
GTF2H3-210ENST00000543005 NDUFB1O75438 58 aa1.25□□□□□ -2.21
GTF2H3-210ENST00000543005 SFTA3P0C7M3 94 aa1.25□□□□□ -2.21
GTF2H3-210ENST00000543005 C3orf79P0CE67 100 aa1.25□□□□□ -2.21
GTF2H3-210ENST00000543005 KRTAP10-4P60372 401 aaPredicted RBP1.25□□□□□ -2.21
GTF2H3-210ENST00000543005 NRAPQ86VF7 1730 aa1.25□□□□□ -2.21
GTF2H3-210ENST00000543005 NESP48681 1621 aa1.25□□□□□ -2.21
GTF2H3-210ENST00000543005 RALGAPBQ86X10 1494 aa1.24□□□□□ -2.21
GTF2H3-210ENST00000543005 ANKRD50Q9ULJ7 1429 aa1.24□□□□□ -2.21
GTF2H3-210ENST00000543005 KIF1AQ12756 1690 aa1.24□□□□□ -2.21
GTF2H3-210ENST00000543005 LCE6AA0A183 80 aa1.24□□□□□ -2.21
GTF2H3-210ENST00000543005 PLXNC1O60486 1568 aa1.24□□□□□ -2.21
GTF2H3-210ENST00000543005 GLI2P10070 1586 aa1.24□□□□□ -2.21
GTF2H3-210ENST00000543005 NAV3Q8IVL0 2385 aa1.23□□□□□ -2.21
GTF2H3-210ENST00000543005 I3L2K1 104 aa1.23□□□□□ -2.21
GTF2H3-210ENST00000543005 COX7BP24311 80 aa1.23□□□□□ -2.21
GTF2H3-210ENST00000543005 ATXN8Q156A1 80 aa1.22□□□□□ -2.21
GTF2H3-210ENST00000543005 SPINK9Q5DT21 86 aa1.22□□□□□ -2.21
GTF2H3-210ENST00000543005 GNG13Q9P2W3 67 aa1.22□□□□□ -2.21
GTF2H3-210ENST00000543005 TSC2P49815 1807 aa1.22□□□□□ -2.21
GTF2H3-210ENST00000543005 ALS2Q96Q42 1657 aa1.2□□□□□ -2.22
GTF2H3-210ENST00000543005 A0A0D9SG42 100 aa1.2□□□□□ -2.22
GTF2H3-210ENST00000543005 TP53AIP1Q9HCN2 124 aa1.2□□□□□ -2.22
GTF2H3-210ENST00000543005 ITSN2Q9NZM3 1697 aa1.19□□□□□ -2.22
GTF2H3-210ENST00000543005 ASH1LQ9NR48 2969 aaKnown RBP1.19□□□□□ -2.22
GTF2H3-210ENST00000543005 FAM208BQ5VWN6 2430 aa1.18□□□□□ -2.22
GTF2H3-210ENST00000543005 AHCTF1Q8WYP5 2266 aa1.18□□□□□ -2.22
GTF2H3-210ENST00000543005 NWD1Q149M9 1564 aa1.18□□□□□ -2.22
GTF2H3-210ENST00000543005 EEA1Q15075 1411 aa1.18□□□□□ -2.22
GTF2H3-210ENST00000543005 MUC6Q6W4X9 2439 aa1.17□□□□□ -2.22
GTF2H3-210ENST00000543005 ABCA10Q8WWZ4 1543 aa1.17□□□□□ -2.22
GTF2H3-210ENST00000543005 KRTAP21-3Q3LHN1 58 aa1.17□□□□□ -2.22
GTF2H3-210ENST00000543005 CRIPTQ9P021 101 aa1.17□□□□□ -2.22
GTF2H3-210ENST00000543005 PRXQ9BXM0 1461 aa1.17□□□□□ -2.22
GTF2H3-210ENST00000543005 MROH2AA6NES4 1674 aa1.16□□□□□ -2.22
GTF2H3-210ENST00000543005 ABCC6O95255 1503 aa1.16□□□□□ -2.22
GTF2H3-210ENST00000543005 A0A0D9SFI3 127 aa1.16□□□□□ -2.22
GTF2H3-210ENST00000543005 DEFB123Q8N688 67 aa1.16□□□□□ -2.22
GTF2H3-210ENST00000543005 FAM103A1Q9BTL3 118 aaKnown RBP1.16□□□□□ -2.22
GTF2H3-210ENST00000543005 CNFNQ9BYD5 112 aa1.16□□□□□ -2.22
GTF2H3-210ENST00000543005 URB1O60287 2271 aaKnown RBP1.15□□□□□ -2.22
GTF2H3-210ENST00000543005 SPTY2D1-AS1A0A0U1RR47 76 aa1.15□□□□□ -2.23
GTF2H3-210ENST00000543005 CPSF4LA6NMK7 179 aaKnown RBP1.15□□□□□ -2.23
GTF2H3-210ENST00000543005 K7EQZ3 153 aa1.15□□□□□ -2.23
GTF2H3-210ENST00000543005 NDUFA4O00483 81 aa1.15□□□□□ -2.23
GTF2H3-210ENST00000543005 ENHOQ6UWT2 76 aa1.15□□□□□ -2.23
GTF2H3-210ENST00000543005 SMIM5Q71RC9 77 aa1.15□□□□□ -2.23
GTF2H3-210ENST00000543005 MAST1Q9Y2H9 1570 aa1.15□□□□□ -2.23
GTF2H3-210ENST00000543005 RNF17Q9BXT8 1623 aaKnown RBP1.15□□□□□ -2.23
GTF2H3-210ENST00000543005 LINC01549A6NIU2 74 aa1.14□□□□□ -2.23
GTF2H3-210ENST00000543005 PRO0255Q9UI72 69 aa1.14□□□□□ -2.23
GTF2H3-210ENST00000543005 TJP1Q07157 1748 aa1.14□□□□□ -2.23
GTF2H3-210ENST00000543005 PRB3Q04118 309 aaPredicted RBP1.13□□□□□ -2.23
GTF2H3-210ENST00000543005 PIGYQ3MUY2 71 aa1.13□□□□□ -2.23
GTF2H3-210ENST00000543005 GOLGA4Q13439 2230 aaKnown RBP1.13□□□□□ -2.23
GTF2H3-210ENST00000543005 LY75O60449 1722 aa1.12□□□□□ -2.23
GTF2H3-210ENST00000543005 DDX60LQ5H9U9 1706 aaKnown RBP1.12□□□□□ -2.23
GTF2H3-210ENST00000543005 ARL14EPLP0DKL9 152 aa1.12□□□□□ -2.23
GTF2H3-210ENST00000543005 TNRC6CQ9HCJ0 1690 aaKnown RBP1.12□□□□□ -2.23
GTF2H3-210ENST00000543005 RPL38P63173 70 aaKnown RBP1.11□□□□□ -2.23
GTF2H3-210ENST00000543005 COX6A2Q02221 97 aa1.11□□□□□ -2.23
GTF2H3-210ENST00000543005 CROCC2H7BZ55 1655 aa1.1□□□□□ -2.23
GTF2H3-210ENST00000543005 SYCP2Q9BX26 1530 aa1.1□□□□□ -2.23
GTF2H3-210ENST00000543005 HELZ2Q9BYK8 2649 aaKnown RBP1.1□□□□□ -2.23
GTF2H3-210ENST00000543005 Q8IZM0 81 aa1.1□□□□□ -2.23
GTF2H3-210ENST00000543005 USMG5Q96IX5 58 aa1.1□□□□□ -2.23
GTF2H3-210ENST00000543005 BIVM-ERCC5R4GMW8 1640 aa1.1□□□□□ -2.23
GTF2H3-210ENST00000543005 C3P01024 1663 aa1.1□□□□□ -2.23
GTF2H3-210ENST00000543005 PIEZO2Q9H5I5 2752 aa1.09□□□□□ -2.23
GTF2H3-210ENST00000543005 ZNF462Q96JM2 2506 aa1.09□□□□□ -2.23
GTF2H3-210ENST00000543005 MRPL34Q9BQ48 92 aaKnown RBP1.09□□□□□ -2.23
GTF2H3-210ENST00000543005 CACNA1EQ15878 2313 aa1.09□□□□□ -2.24
GTF2H3-210ENST00000543005 I3L3M4 83 aa1.08□□□□□ -2.24
GTF2H3-210ENST00000543005 CPS1P31327 1500 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms