RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 Q8N8P6 123 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 CYSTM1Q9H1C7 97 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 TMEM14BQ9NUH8 114 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 NACAE9PAV3 2078 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 PCLOQ9Y6V0 5065 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 PRKDCP78527 4128 aaKnown RBP2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 ANK3Q12955 4377 aaKnown RBP2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 IGLV2-18A0A075B6J9 118 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 TRBV7-1A0A0A6YYK4 115 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 IGHV1-58A0A0C4DH39 117 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 A0A1B0GUT8 65 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 LRCOL1A6NCL2 159 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 D6R8Y8 96 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 ZNF22P17026 224 aaPredicted RBP2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 CRIP1P50238 77 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 C2orf82Q6UX34 121 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 ZNF826PQ6ZT77 177 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 LINC00167Q96N53 147 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 XAGE1AQ9HD64 81 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 R4GN34 69 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 SVEP1Q4LDE5 3571 aa2.26□□□□□ -2.05
SFSWAP-211ENST00000542813 TRAV12-1A0A0B4J245 112 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 TRAV41A0A0B4J266 112 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 TRBV30A0A0K0K1B3 111 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 TRBV6-1A0A0K0K1D8 114 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 LEPROTO15243 131 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 NDUFC1O43677 76 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 LINC00315P59091 139 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 PRCDQ00LT1 54 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 C10orf113Q5VZT2 155 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 SFTA2Q6UW10 78 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 C1orf64Q8NEQ6 169 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 SMCR5Q8TEV8 140 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 LEAP2Q969E1 77 aa2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 MRPL35Q9NZE8 188 aaKnown RBP2.25□□□□□ -2.05
SFSWAP-211ENST00000542813 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.25□□□□□ -2.052e-6■■■■□ 25.3
SFSWAP-211ENST00000542813 TENM1Q9UKZ4 2725 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 IBA57-AS1B1ANH7 110 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 E7EUB6 86 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 H3BPC8 53 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 NDUFB3O43676 98 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 IGHV3-33P01772 117 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 CCKP06307 115 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 C10orf55Q5SWW7 151 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 Q6JHZ5 121 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 LYZL1Q6UWQ5 148 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 DCANP1Q8TF63 244 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 TM2D3Q9BRN9 247 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 SLC50A1Q9BRV3 221 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 HRNRQ86YZ3 2850 aaPredicted RBP2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 SEC16AO15027 2179 aa2.24□□□□□ -2.05
SFSWAP-211ENST00000542813 FREM1Q5H8C1 2179 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 ZGRF1Q86YA3 2104 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 TRBV27A0A0K0K1C4 114 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 F8VRH5 84 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 PSCAO43653 123 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 IGHV3-30P01768 117 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 COX6CP09669 75 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 SAA1P0DJI8 122 aaPredicted RBP2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 SAA2P0DJI9 122 aaPredicted RBP2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 IGHV3-30-5P0DP03 117 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 LGALS3P17931 250 aaKnown RBP2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 XCL1P47992 114 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 SNRPD3P62318 126 aaKnown RBP2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 WT1-ASQ06250 92 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 MIAQ16674 131 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 KTN1-AS1Q86SY8 53 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 Q8IYB0 196 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 TMEM263Q8WUH6 116 aaKnown RBP2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 HIGD2AQ9BW72 106 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 NDUFA4L2Q9NRX3 87 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 HEATR1Q9H583 2144 aaKnown RBP2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 TENM3Q9P273 2699 aa2.23□□□□□ -2.05
SFSWAP-211ENST00000542813 TRRAPQ9Y4A5 3859 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 EPPK1P58107 5090 aaKnown RBP2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 IGKV1D-17A0A075B6S4 117 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 A0A0J9YY99 117 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 ZNF815PA8K554 130 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 IQCF6A8MYZ5 107 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 H7BZZ5 65 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 TIMM17BO60830 172 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 NDUFA3O95167 84 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 IGKV1-16P04430 117 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 ZNF80P51504 273 aaPredicted RBP2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 KLKP1Q107X0 134 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 RHOHQ15669 191 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 LYPD5Q6UWN5 251 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 Q8N2B8 174 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 AMELXQ99217 191 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 TIMM21Q9BVV7 248 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 TNCP24821 2201 aa2.22□□□□□ -2.05
SFSWAP-211ENST00000542813 TRAV7A0A075B6U4 112 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 TRAV13-2A0A0B4J235 113 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 TRBV10-3A0A0K0K1G6 114 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 BUB1B-PAK6H3BSN5 160 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 M0R3E3 92 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 MRPL33O75394 65 aaKnown RBP2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 HRES1P13985 223 aa2.21□□□□□ -2.06
SFSWAP-211ENST00000542813 CKS2P33552 79 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms