RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 TSC2P49815 1807 aa4.56□□□□□ -1.68
LRP6-205ENST00000540527 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.55□□□□□ -1.68
LRP6-205ENST00000540527 A0A096LNT2 108 aa4.54□□□□□ -1.68
LRP6-205ENST00000540527 TRBV30A0A0K0K1B3 111 aa4.54□□□□□ -1.68
LRP6-205ENST00000540527 DEFB103AP81534 67 aa4.54□□□□□ -1.68
LRP6-205ENST00000540527 ATXN8Q156A1 80 aa4.54□□□□□ -1.68
LRP6-205ENST00000540527 ABCA1O95477 2261 aa4.54□□□□□ -1.68
LRP6-205ENST00000540527 FXYD6P3P58550 94 aa4.53□□□□□ -1.68
LRP6-205ENST00000540527 C10orf113Q5VZT2 155 aa4.53□□□□□ -1.68
LRP6-205ENST00000540527 BRD3OSQ6XYD6 125 aa4.53□□□□□ -1.68
LRP6-205ENST00000540527 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
LRP6-205ENST00000540527 NDUFB1O75438 58 aa4.52□□□□□ -1.69
LRP6-205ENST00000540527 HMGA1P17096 107 aaKnown RBP4.52□□□□□ -1.69
LRP6-205ENST00000540527 CPSF4LA6NMK7 179 aaKnown RBP4.51□□□□□ -1.69
LRP6-205ENST00000540527 PRB2P02812 416 aaPredicted RBP4.51□□□□□ -1.69
LRP6-205ENST00000540527 IFI6P09912 130 aa4.51□□□□□ -1.69
LRP6-205ENST00000540527 CCL22O00626 93 aa4.5□□□□□ -1.69
LRP6-205ENST00000540527 PIN1P1O15428 100 aa4.5□□□□□ -1.69
LRP6-205ENST00000540527 PLAC4Q8WY50 150 aa4.5□□□□□ -1.69
LRP6-205ENST00000540527 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
LRP6-205ENST00000540527 SMIM11BQ8TCY0 68 aa4.49□□□□□ -1.69
LRP6-205ENST00000540527 ASCC3Q8N3C0 2202 aaKnown RBP4.48□□□□□ -1.69
LRP6-205ENST00000540527 LINC00575Q6W349 94 aa4.47□□□□□ -1.69
LRP6-205ENST00000540527 Q6ZRX8 168 aa4.47□□□□□ -1.69
LRP6-205ENST00000540527 COL14A1Q05707 1796 aaKnown RBP4.47□□□□□ -1.69
LRP6-205ENST00000540527 NOTCH3Q9UM47 2321 aa4.46□□□□□ -1.7
LRP6-205ENST00000540527 GVQW2A0A096LPI5 108 aaPredicted RBP4.45□□□□□ -1.7
LRP6-205ENST00000540527 CHD8Q9HCK8 2581 aa4.45□□□□□ -1.7
LRP6-205ENST00000540527 TRANK1O15050 2925 aa4.45□□□□□ -1.7
LRP6-205ENST00000540527 TRAV21A0A0B4J279 112 aa4.44□□□□□ -1.7
LRP6-205ENST00000540527 PCOTHQ58A44 107 aa4.44□□□□□ -1.7
LRP6-205ENST00000540527 FAM103A1Q9BTL3 118 aaKnown RBP4.44□□□□□ -1.7
LRP6-205ENST00000540527 ZNF831Q5JPB2 1677 aa4.44□□□□□ -1.7
LRP6-205ENST00000540527 SPINK13Q1W4C9 94 aa4.43□□□□□ -1.7
LRP6-205ENST00000540527 COL6A3P12111 3177 aa4.43□□□□□ -1.7
LRP6-205ENST00000540527 GOLGB1Q14789 3259 aaKnown RBP4.42□□□□□ -1.7
LRP6-205ENST00000540527 G3V318 75 aa4.42□□□□□ -1.7
LRP6-205ENST00000540527 NCR3O14931 201 aa4.42□□□□□ -1.7
LRP6-205ENST00000540527 F5P12259 2224 aa4.42□□□□□ -1.7
LRP6-205ENST00000540527 UBR3Q6ZT12 1888 aa4.41□□□□□ -1.7
LRP6-205ENST00000540527 TRBV6-1A0A0K0K1D8 114 aa4.41□□□□□ -1.7
LRP6-205ENST00000540527 KMT2BQ9UMN6 2715 aaPredicted RBP4.41□□□□□ -1.7
LRP6-205ENST00000540527 COL4A4P53420 1690 aaPredicted RBP4.41□□□□□ -1.7
LRP6-205ENST00000540527 SETXQ7Z333 2677 aaKnown RBP4.4□□□□□ -1.7
LRP6-205ENST00000540527 CACNA1CQ13936 2221 aa4.4□□□□□ -1.7
LRP6-205ENST00000540527 LINC01590Q5TEZ4 76 aa4.4□□□□□ -1.71
LRP6-205ENST00000540527 KRTAP17-1Q9BYP8 105 aa4.4□□□□□ -1.71
LRP6-205ENST00000540527 TTTY10Q9BZA0 68 aa4.39□□□□□ -1.71
LRP6-205ENST00000540527 NREPQ16612 68 aa4.38□□□□□ -1.71
LRP6-205ENST00000540527 SZT2Q5T011 3432 aa4.37□□□□□ -1.71
LRP6-205ENST00000540527 LCE6AA0A183 80 aa4.37□□□□□ -1.71
LRP6-205ENST00000540527 ARHGAP5-AS1Q96IT6 56 aa4.37□□□□□ -1.71
LRP6-205ENST00000540527 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
LRP6-205ENST00000540527 TMEM167BQ9NRX6 74 aa4.37□□□□□ -1.71
LRP6-205ENST00000540527 PAPPA2Q9BXP8 1791 aa4.37□□□□□ -1.71
LRP6-205ENST00000540527 A0A1B0GU69 56 aa4.35□□□□□ -1.71
LRP6-205ENST00000540527 UNC80Q8N2C7 3258 aa4.34□□□□□ -1.71
LRP6-205ENST00000540527 SMIM27A0A1W2PRY6 76 aa4.34□□□□□ -1.71
LRP6-205ENST00000540527 DEFB112Q30KQ8 113 aa4.34□□□□□ -1.71
LRP6-205ENST00000540527 WFDC9Q8NEX5 89 aa4.34□□□□□ -1.71
LRP6-205ENST00000540527 KRTAP13-3Q3SY46 172 aa4.33□□□□□ -1.72
LRP6-205ENST00000540527 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
LRP6-205ENST00000540527 KRTAP4-5Q9BYR2 181 aa4.33□□□□□ -1.72
LRP6-205ENST00000540527 CACNA1BQ00975 2339 aa4.32□□□□□ -1.72
LRP6-205ENST00000540527 LINC00959A0A1B0GUT2 108 aa4.32□□□□□ -1.72
LRP6-205ENST00000540527 LY6G6CO95867 125 aa4.32□□□□□ -1.72
LRP6-205ENST00000540527 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
LRP6-205ENST00000540527 HAMPP81172 84 aa4.32□□□□□ -1.72
LRP6-205ENST00000540527 GAFA1Q96PS6 74 aa4.32□□□□□ -1.72
LRP6-205ENST00000540527 LINC01549A6NIU2 74 aa4.31□□□□□ -1.72
LRP6-205ENST00000540527 PLXNB2O15031 1838 aa4.3□□□□□ -1.72
LRP6-205ENST00000540527 PIEZO1Q92508 2521 aa4.29□□□□□ -1.72
LRP6-205ENST00000540527 PRB1P04280 392 aa4.29□□□□□ -1.72
LRP6-205ENST00000540527 MAST4O15021 2626 aa4.29□□□□□ -1.72
LRP6-205ENST00000540527 SPTBN5Q9NRC6 3674 aaKnown RBP4.27□□□□□ -1.73
LRP6-205ENST00000540527 ANKRD11Q6UB99 2663 aaPredicted RBP4.27□□□□□ -1.73
LRP6-205ENST00000540527 Q9Y3F1 56 aa4.27□□□□□ -1.73
LRP6-205ENST00000540527 H3BSH0 61 aa4.26□□□□□ -1.73
LRP6-205ENST00000540527 ARL14EPLP0DKL9 152 aa4.26□□□□□ -1.73
LRP6-205ENST00000540527 IAPPP10997 89 aa4.26□□□□□ -1.73
LRP6-205ENST00000540527 CADP27708 2225 aa4.25□□□□□ -1.73
LRP6-205ENST00000540527 VCANP13611 3396 aa4.25□□□□□ -1.73
LRP6-205ENST00000540527 PLNP26678 52 aa4.24□□□□□ -1.73
LRP6-205ENST00000540527 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
LRP6-205ENST00000540527 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
LRP6-205ENST00000540527 BDP1A6H8Y1 2624 aa4.24□□□□□ -1.73
LRP6-205ENST00000540527 TRIOBPQ9H2D6 2365 aa4.23□□□□□ -1.73
LRP6-205ENST00000540527 RPS27P42677 84 aaKnown RBP4.22□□□□□ -1.73
LRP6-205ENST00000540527 SSBP3-AS1Q7Z2R9 100 aa4.22□□□□□ -1.73
LRP6-205ENST00000540527 BPTFQ12830 3046 aa4.22□□□□□ -1.73
LRP6-205ENST00000540527 CHD6Q8TD26 2715 aa4.22□□□□□ -1.73
LRP6-205ENST00000540527 ZFHX4Q86UP3 3567 aa4.21□□□□□ -1.74
LRP6-205ENST00000540527 SPINK4O60575 86 aa4.21□□□□□ -1.74
LRP6-205ENST00000540527 COX14Q96I36 57 aa4.21□□□□□ -1.74
LRP6-205ENST00000540527 ANKRD17O75179 2603 aaKnown RBP4.2□□□□□ -1.74
LRP6-205ENST00000540527 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
LRP6-205ENST00000540527 TECTAO75443 2155 aa4.19□□□□□ -1.74
LRP6-205ENST00000540527 K7EMI3 77 aa4.19□□□□□ -1.74
LRP6-205ENST00000540527 TFF3Q07654 80 aa4.19□□□□□ -1.74
LRP6-205ENST00000540527 FLNBO75369 2602 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms