RNA–Protein interactions for RNA: ENST00000538174.6

PTPRB-203, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best)

Gene PTPRB, Length 2,661 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-203ENST00000538174 FUSP35637 526 aaKnown RBP eCLIP4.71□□□□□ -1.65
PTPRB-203ENST00000538174 RPL39P62891 51 aaKnown RBP4.71□□□□□ -1.65
PTPRB-203ENST00000538174 ATXN8Q156A1 80 aa4.71□□□□□ -1.65
PTPRB-203ENST00000538174 LINC01554Q52M75 96 aa4.71□□□□□ -1.65
PTPRB-203ENST00000538174 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.65
PTPRB-203ENST00000538174 TTTY13Q9BZ97 58 aa4.71□□□□□ -1.65
PTPRB-203ENST00000538174 WNK2Q9Y3S1 2297 aa4.71□□□□□ -1.66
PTPRB-203ENST00000538174 CD28P10747 220 aa4.71□□□□□ -1.66
PTPRB-203ENST00000538174 TSPEAR-AS2P59090 65 aa4.71□□□□□ -1.66
PTPRB-203ENST00000538174 SEC61BP60468 96 aaKnown RBP4.71□□□□□ -1.66
PTPRB-203ENST00000538174 RPL36AP83881 106 aaKnown RBP4.71□□□□□ -1.66
PTPRB-203ENST00000538174 DIRC1Q969H9 104 aa4.71□□□□□ -1.66
PTPRB-203ENST00000538174 RPL36ALQ969Q0 106 aaKnown RBP4.71□□□□□ -1.66
PTPRB-203ENST00000538174 K7EQD1 137 aa4.7□□□□□ -1.66
PTPRB-203ENST00000538174 PSPHP1O15172 72 aa4.7□□□□□ -1.66
PTPRB-203ENST00000538174 COX6CP09669 75 aa4.7□□□□□ -1.66
PTPRB-203ENST00000538174 AGRNO00468 2067 aa4.7□□□□□ -1.66
PTPRB-203ENST00000538174 IGLV1-51P01701 117 aa4.7□□□□□ -1.66
PTPRB-203ENST00000538174 ACYP1P07311 99 aa4.7□□□□□ -1.66
PTPRB-203ENST00000538174 ODF3L2Q3SX64 289 aa4.7□□□□□ -1.66
PTPRB-203ENST00000538174 DNAH6Q9C0G6 4158 aa4.7□□□□□ -1.66
PTPRB-203ENST00000538174 LOC107984156A0A0G2JMH3 177 aa4.69□□□□□ -1.66
PTPRB-203ENST00000538174 TRBV10-2A0A0K0K1G8 114 aa4.69□□□□□ -1.66
PTPRB-203ENST00000538174 SLURP1P55000 103 aa4.69□□□□□ -1.66
PTPRB-203ENST00000538174 ATP5EP56381 51 aaPredicted RBP4.69□□□□□ -1.66
PTPRB-203ENST00000538174 DEFB1P60022 68 aa4.69□□□□□ -1.66
PTPRB-203ENST00000538174 ARL17AQ8IVW1 177 aa4.69□□□□□ -1.66
PTPRB-203ENST00000538174 XCL2Q9UBD3 114 aa4.69□□□□□ -1.66
PTPRB-203ENST00000538174 IBA57-AS1B1ANH7 110 aa4.69□□□□□ -1.66
PTPRB-203ENST00000538174 FAM74A4Q5TZK3 123 aa4.69□□□□□ -1.66
PTPRB-203ENST00000538174 C10orf99Q6UWK7 81 aa4.69□□□□□ -1.66
PTPRB-203ENST00000538174 KLHL30-AS1Q8NEE0 82 aa4.69□□□□□ -1.66
PTPRB-203ENST00000538174 NDUFA12Q9UI09 145 aa4.69□□□□□ -1.66
PTPRB-203ENST00000538174 H7BZZ5 65 aa4.68□□□□□ -1.66
PTPRB-203ENST00000538174 MUSTN1Q8IVN3 82 aa4.68□□□□□ -1.66
PTPRB-203ENST00000538174 CSNK1G2-AS1Q8NCQ2 148 aa4.68□□□□□ -1.66
PTPRB-203ENST00000538174 UBE2WQ96B02 151 aa4.68□□□□□ -1.66
PTPRB-203ENST00000538174 NACAE9PAV3 2078 aa4.68□□□□□ -1.66
PTPRB-203ENST00000538174 ZNF625Q96I27 306 aaPredicted RBP4.68□□□□□ -1.66
PTPRB-203ENST00000538174 CDC42SE2Q9NRR3 84 aa4.68□□□□□ -1.66
PTPRB-203ENST00000538174 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
PTPRB-203ENST00000538174 A0A1B0GUV1 79 aa4.67□□□□□ -1.66
PTPRB-203ENST00000538174 KIAA0087Q14695 138 aa4.67□□□□□ -1.66
PTPRB-203ENST00000538174 SOSTDC1Q6X4U4 206 aa4.67□□□□□ -1.66
PTPRB-203ENST00000538174 LINC00476Q8WZB0 136 aa4.67□□□□□ -1.66
PTPRB-203ENST00000538174 TEX49A0A1B0GTD5 131 aa4.67□□□□□ -1.66
PTPRB-203ENST00000538174 PRB2P02812 416 aaPredicted RBP4.67□□□□□ -1.66
PTPRB-203ENST00000538174 IGKV3-7A0A075B6H7 116 aa4.66□□□□□ -1.66
PTPRB-203ENST00000538174 A6NN06 94 aa4.66□□□□□ -1.66
PTPRB-203ENST00000538174 PRB4P10163 310 aaPredicted RBP4.66□□□□□ -1.66
PTPRB-203ENST00000538174 LINC00242Q5T6M2 205 aa4.66□□□□□ -1.66
PTPRB-203ENST00000538174 C2orf82Q6UX34 121 aa4.66□□□□□ -1.66
PTPRB-203ENST00000538174 IGHV3OR16-12A0A075B7B8 117 aa4.66□□□□□ -1.66
PTPRB-203ENST00000538174 CDK2AP2O75956 126 aa4.66□□□□□ -1.66
PTPRB-203ENST00000538174 UBE2AP49459 152 aa4.66□□□□□ -1.66
PTPRB-203ENST00000538174 CXCL6P80162 114 aa4.66□□□□□ -1.66
PTPRB-203ENST00000538174 LYSTQ99698 3801 aa4.66□□□□□ -1.66
PTPRB-203ENST00000538174 XCL1P47992 114 aa4.65□□□□□ -1.66
PTPRB-203ENST00000538174 Q6ZSN1 163 aa4.65□□□□□ -1.66
PTPRB-203ENST00000538174 ICOSQ9Y6W8 199 aa4.65□□□□□ -1.66
PTPRB-203ENST00000538174 TRAV13-2A0A0B4J235 113 aa4.65□□□□□ -1.67
PTPRB-203ENST00000538174 NUPR2A6NF83 97 aa4.65□□□□□ -1.67
PTPRB-203ENST00000538174 PRM2P04554 102 aa4.65□□□□□ -1.67
PTPRB-203ENST00000538174 GIG44P09565 113 aaPredicted RBP4.65□□□□□ -1.67
PTPRB-203ENST00000538174 SDIM1Q6ZPB5 146 aa4.65□□□□□ -1.67
PTPRB-203ENST00000538174 SMIM1B2RUZ4 78 aa4.64□□□□□ -1.67
PTPRB-203ENST00000538174 C18orf65Q6ZTR6 163 aa4.64□□□□□ -1.67
PTPRB-203ENST00000538174 CLEC2BQ92478 149 aa4.64□□□□□ -1.67
PTPRB-203ENST00000538174 WNK1Q9H4A3 2382 aa4.64□□□□□ -1.67
PTPRB-203ENST00000538174 SVEP1Q4LDE5 3571 aa4.64□□□□□ -1.67
PTPRB-203ENST00000538174 H3BQ85 93 aa4.64□□□□□ -1.67
PTPRB-203ENST00000538174 LINC00308Q8TCZ7 52 aa4.64□□□□□ -1.67
PTPRB-203ENST00000538174 RPL28P46779 137 aaKnown RBP4.63□□□□□ -1.67
PTPRB-203ENST00000538174 NOTCH1P46531 2555 aa4.63□□□□□ -1.67
PTPRB-203ENST00000538174 H0YGX0 51 aa4.63□□□□□ -1.67
PTPRB-203ENST00000538174 IGKV3-20P01619 116 aa4.63□□□□□ -1.67
PTPRB-203ENST00000538174 COX17Q14061 63 aa4.63□□□□□ -1.67
PTPRB-203ENST00000538174 FAM229BQ4G0N7 80 aa4.63□□□□□ -1.67
PTPRB-203ENST00000538174 ATP11AUNQ6ZP68 121 aa4.63□□□□□ -1.67
PTPRB-203ENST00000538174 NTM-AS1Q6ZSK4 140 aa4.63□□□□□ -1.67
PTPRB-203ENST00000538174 CDKN2A-AS1Q9UH64 79 aa4.63□□□□□ -1.67
PTPRB-203ENST00000538174 TRBV6-8A0A0A6YYG3 113 aa4.62□□□□□ -1.67
PTPRB-203ENST00000538174 C20orf197Q8N268 126 aa4.62□□□□□ -1.67
PTPRB-203ENST00000538174 IGLV9-49A0A0B4J1Y8 123 aa4.61□□□□□ -1.67
PTPRB-203ENST00000538174 ADAMTSL4-AS1Q5T5F5 129 aa4.61□□□□□ -1.67
PTPRB-203ENST00000538174 DAND5Q8N907 189 aa4.61□□□□□ -1.67
PTPRB-203ENST00000538174 SMCR5Q8TEV8 140 aa4.61□□□□□ -1.67
PTPRB-203ENST00000538174 TRGV1A0A0A0MS02 117 aa4.61□□□□□ -1.67
PTPRB-203ENST00000538174 IGHV4-28A0A0C4DH34 117 aa4.61□□□□□ -1.67
PTPRB-203ENST00000538174 Q1T7F1 81 aa4.61□□□□□ -1.67
PTPRB-203ENST00000538174 NOTCH2NLQ7Z3S9 236 aa4.61□□□□□ -1.67
PTPRB-203ENST00000538174 CELA1Q9UNI1 258 aa4.61□□□□□ -1.67
PTPRB-203ENST00000538174 TENM3Q9P273 2699 aa4.6□□□□□ -1.67
PTPRB-203ENST00000538174 ESRGQ1W209 222 aa4.6□□□□□ -1.67
PTPRB-203ENST00000538174 DEFB136Q30KP8 78 aa4.6□□□□□ -1.67
PTPRB-203ENST00000538174 SCXQ7RTU7 201 aa4.6□□□□□ -1.67
PTPRB-203ENST00000538174 SND1-IT1Q9HBX3 110 aa4.6□□□□□ -1.67
PTPRB-203ENST00000538174 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.6□□□□□ -1.67
PTPRB-203ENST00000538174 IGKV2-29A2NJV5 120 aaPredicted RBP4.6□□□□□ -1.67
PTPRB-203ENST00000538174 H3BNG1 76 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms