RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 SPG11Q96JI7 2443 aa7.67□□□□□ -1.18
LINC00346-201ENST00000538077 SPATA3Q8NHX4 192 aa7.66□□□□□ -1.18
LINC00346-201ENST00000538077 FAM19A4Q96LR4 140 aa7.66□□□□□ -1.18
LINC00346-201ENST00000538077 DNAH14Q0VDD8 3507 aa7.66□□□□□ -1.18
LINC00346-201ENST00000538077 XIRP2A4UGR9 3374 aa7.66□□□□□ -1.18
LINC00346-201ENST00000538077 PLA2G1BP04054 148 aaKnown RBP7.66□□□□□ -1.18
LINC00346-201ENST00000538077 Q96NJ1 140 aa7.65□□□□□ -1.18
LINC00346-201ENST00000538077 PRO0628Q9UI54 55 aa7.65□□□□□ -1.18
LINC00346-201ENST00000538077 hDV103S1A0JD37 113 aa7.65□□□□□ -1.18
LINC00346-201ENST00000538077 KRTAP10-11P60412 298 aa7.65□□□□□ -1.19
LINC00346-201ENST00000538077 Q8NAQ8 132 aa7.64□□□□□ -1.19
LINC00346-201ENST00000538077 WWC2-AS2Q96NR7 200 aa7.64□□□□□ -1.19
LINC00346-201ENST00000538077 Q6ZRP5 223 aa7.63□□□□□ -1.19
LINC00346-201ENST00000538077 IGHV3OR16-9A0A0B4J2B5 98 aa7.63□□□□□ -1.19
LINC00346-201ENST00000538077 LINC00313P59037 77 aa7.63□□□□□ -1.19
LINC00346-201ENST00000538077 IGLV8-61A0A075B6I0 122 aa7.62□□□□□ -1.19
LINC00346-201ENST00000538077 DNAH10OSP0CZ25 163 aa7.62□□□□□ -1.19
LINC00346-201ENST00000538077 FAM218AQ96MZ4 157 aa7.62□□□□□ -1.19
LINC00346-201ENST00000538077 TMEM254Q8TBM7 123 aa7.62□□□□□ -1.19
LINC00346-201ENST00000538077 LINC00476Q8WZB0 136 aa7.62□□□□□ -1.19
LINC00346-201ENST00000538077 IGLV5-39A0A0G2JS06 123 aa7.62□□□□□ -1.19
LINC00346-201ENST00000538077 VPREB1P12018 145 aa7.61□□□□□ -1.19
LINC00346-201ENST00000538077 C4orf26Q17RF5 130 aa7.61□□□□□ -1.19
LINC00346-201ENST00000538077 SZT2Q5T011 3432 aa7.6□□□□□ -1.19
LINC00346-201ENST00000538077 ELOF1P60002 83 aaKnown RBP7.6□□□□□ -1.19
LINC00346-201ENST00000538077 SMR3BP02814 79 aaPredicted RBP7.59□□□□□ -1.19
LINC00346-201ENST00000538077 Q8NBF4 154 aa7.59□□□□□ -1.19
LINC00346-201ENST00000538077 A0A1B0GU69 56 aa7.58□□□□□ -1.2
LINC00346-201ENST00000538077 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
LINC00346-201ENST00000538077 PIEZO2Q9H5I5 2752 aa7.58□□□□□ -1.2
LINC00346-201ENST00000538077 Q6ZRX8 168 aa7.57□□□□□ -1.2
LINC00346-201ENST00000538077 H3BNG1 76 aa7.57□□□□□ -1.2
LINC00346-201ENST00000538077 CXCL6P80162 114 aa7.57□□□□□ -1.2
LINC00346-201ENST00000538077 LINC01546A6NGU7 62 aa7.56□□□□□ -1.2
LINC00346-201ENST00000538077 LAMA3Q16787 3333 aa7.56□□□□□ -1.2
LINC00346-201ENST00000538077 ATP11AUNQ6ZP68 121 aa7.56□□□□□ -1.2
LINC00346-201ENST00000538077 NOTCH2Q04721 2471 aa7.56□□□□□ -1.2
LINC00346-201ENST00000538077 TTC28Q96AY4 2481 aa7.56□□□□□ -1.2
LINC00346-201ENST00000538077 SPAG11AQ6PDA7 123 aa7.56□□□□□ -1.2
LINC00346-201ENST00000538077 CDIP1Q9H305 208 aa7.56□□□□□ -1.2
LINC00346-201ENST00000538077 KRTAP10-3P60369 221 aa7.56□□□□□ -1.2
LINC00346-201ENST00000538077 K7EIL1 84 aa7.55□□□□□ -1.2
LINC00346-201ENST00000538077 NAV3Q8IVL0 2385 aa7.55□□□□□ -1.2
LINC00346-201ENST00000538077 BCE1O60756 84 aa7.55□□□□□ -1.2
LINC00346-201ENST00000538077 COX6B2Q6YFQ2 88 aa7.55□□□□□ -1.2
LINC00346-201ENST00000538077 ACYP2P14621 99 aa7.53□□□□□ -1.2
LINC00346-201ENST00000538077 SONP18583 2426 aaKnown RBP7.53□□□□□ -1.2
LINC00346-201ENST00000538077 GVQW2A0A096LPI5 108 aaPredicted RBP7.52□□□□□ -1.21
LINC00346-201ENST00000538077 ACACBO00763 2458 aa7.52□□□□□ -1.21
LINC00346-201ENST00000538077 Q6ZQT0 140 aa7.51□□□□□ -1.21
LINC00346-201ENST00000538077 IGF2RP11717 2491 aa7.51□□□□□ -1.21
LINC00346-201ENST00000538077 DSCR10P59022 87 aa7.5□□□□□ -1.21
LINC00346-201ENST00000538077 NAV2Q8IVL1 2488 aa7.49□□□□□ -1.21
LINC00346-201ENST00000538077 TP53AIP1Q9HCN2 124 aa7.49□□□□□ -1.21
LINC00346-201ENST00000538077 ANAPC11Q9NYG5 84 aa7.49□□□□□ -1.21
LINC00346-201ENST00000538077 IGLV5-45A0A087WSX0 123 aa7.49□□□□□ -1.21
LINC00346-201ENST00000538077 RPS28P62857 69 aaKnown RBP7.49□□□□□ -1.21
LINC00346-201ENST00000538077 A0A0G2JQZ4 141 aa7.48□□□□□ -1.21
LINC00346-201ENST00000538077 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
LINC00346-201ENST00000538077 CHD7Q9P2D1 2997 aa7.46□□□□□ -1.21
LINC00346-201ENST00000538077 SMCPP49901 116 aaPredicted RBP7.46□□□□□ -1.22
LINC00346-201ENST00000538077 NCOR2Q9Y618 2525 aa7.46□□□□□ -1.22
LINC00346-201ENST00000538077 OBSCN-AS1Q96MR7 158 aa7.46□□□□□ -1.22
LINC00346-201ENST00000538077 ATRXP46100 2492 aa7.46□□□□□ -1.22
LINC00346-201ENST00000538077 UNC80Q8N2C7 3258 aa7.45□□□□□ -1.22
LINC00346-201ENST00000538077 ABCA2Q9BZC7 2435 aa7.45□□□□□ -1.22
LINC00346-201ENST00000538077 C15orf56Q8N910 161 aa7.44□□□□□ -1.22
LINC00346-201ENST00000538077 CSNK1G2-AS1Q8NCQ2 148 aa7.44□□□□□ -1.22
LINC00346-201ENST00000538077 TM2D3Q9BRN9 247 aa7.44□□□□□ -1.22
LINC00346-201ENST00000538077 IGLV1-50A0A075B6I6 118 aa7.43□□□□□ -1.22
LINC00346-201ENST00000538077 K7EQZ3 153 aa7.43□□□□□ -1.22
LINC00346-201ENST00000538077 CCDC168Q8NDH2 2452 aa7.43□□□□□ -1.22
LINC00346-201ENST00000538077 LINC00304Q8N9R0 145 aa7.43□□□□□ -1.22
LINC00346-201ENST00000538077 TRAV22A0A0B4J277 110 aa7.42□□□□□ -1.22
LINC00346-201ENST00000538077 LOC110117498A0A087WWA1 95 aa7.41□□□□□ -1.22
LINC00346-201ENST00000538077 EYSQ5T1H1 3165 aa7.41□□□□□ -1.22
LINC00346-201ENST00000538077 APLNQ9ULZ1 77 aa7.41□□□□□ -1.22
LINC00346-201ENST00000538077 A0A087WTM6 91 aa7.4□□□□□ -1.23
LINC00346-201ENST00000538077 TRBV7-4A0A0J9YYF1 115 aa7.4□□□□□ -1.23
LINC00346-201ENST00000538077 IGLV6-57P01721 117 aa7.4□□□□□ -1.23
LINC00346-201ENST00000538077 C19orf73Q9NVV2 129 aa7.39□□□□□ -1.23
LINC00346-201ENST00000538077 A8MWP4 228 aa7.39□□□□□ -1.23
LINC00346-201ENST00000538077 C9orf129Q5T035 196 aaKnown RBP7.39□□□□□ -1.23
LINC00346-201ENST00000538077 CASC10Q5T4H9 136 aa7.39□□□□□ -1.23
LINC00346-201ENST00000538077 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
LINC00346-201ENST00000538077 IGFL1Q6UW32 110 aa7.38□□□□□ -1.23
LINC00346-201ENST00000538077 MRPL34Q9BQ48 92 aaKnown RBP7.38□□□□□ -1.23
LINC00346-201ENST00000538077 C8orf87E5RJ46 101 aa7.37□□□□□ -1.23
LINC00346-201ENST00000538077 RANBP2P49792 3224 aaKnown RBP7.37□□□□□ -1.23
LINC00346-201ENST00000538077 LITAFQ99732 161 aa7.37□□□□□ -1.23
LINC00346-201ENST00000538077 MUC4Q99102 2169 aa7.36□□□□□ -1.23
LINC00346-201ENST00000538077 WDR87Q6ZQQ6 2873 aa7.35□□□□□ -1.23
LINC00346-201ENST00000538077 LAMA2P24043 3122 aaKnown RBP7.35□□□□□ -1.23
LINC00346-201ENST00000538077 PRO0461Q9UI25 63 aa7.35□□□□□ -1.23
LINC00346-201ENST00000538077 MYO15AQ9UKN7 3530 aa7.34□□□□□ -1.23
LINC00346-201ENST00000538077 A0A096LNT2 108 aa7.34□□□□□ -1.23
LINC00346-201ENST00000538077 ZNF861PO60384 105 aa7.34□□□□□ -1.23
LINC00346-201ENST00000538077 GIG44P09565 113 aaPredicted RBP7.33□□□□□ -1.24
LINC00346-201ENST00000538077 SSBP3-AS1Q7Z2R9 100 aa7.33□□□□□ -1.24
LINC00346-201ENST00000538077 LINC01554Q52M75 96 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms