RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 LIMD2Q9BT23 127 aa6.91□□□□□ -1.3
RFX4-204ENST00000536688 ITPR3Q14573 2671 aa6.9□□□□□ -1.3
RFX4-204ENST00000536688 CSMD1Q96PZ7 3565 aa6.9□□□□□ -1.3
RFX4-204ENST00000536688 ANKHD1Q8IWZ3 2542 aaKnown RBP6.9□□□□□ -1.3
RFX4-204ENST00000536688 ELOF1P60002 83 aaKnown RBP6.9□□□□□ -1.3
RFX4-204ENST00000536688 LINC01006Q8NI28 216 aa6.9□□□□□ -1.3
RFX4-204ENST00000536688 A8MUN3 132 aa6.89□□□□□ -1.31
RFX4-204ENST00000536688 H3BUX3 64 aa6.89□□□□□ -1.31
RFX4-204ENST00000536688 LINC00269Q8N2A0 174 aa6.89□□□□□ -1.31
RFX4-204ENST00000536688 IGHV4-61A0A0C4DH41 118 aa6.89□□□□□ -1.31
RFX4-204ENST00000536688 IGHV4-30-4P0DP06 118 aa6.89□□□□□ -1.31
RFX4-204ENST00000536688 KIAA0087Q14695 138 aa6.89□□□□□ -1.31
RFX4-204ENST00000536688 RELNP78509 3460 aa6.88□□□□□ -1.31
RFX4-204ENST00000536688 TRGV2A0A075B6R0 118 aa6.88□□□□□ -1.31
RFX4-204ENST00000536688 IGKV3OR2-268A0A0C4DH90 116 aa6.88□□□□□ -1.31
RFX4-204ENST00000536688 LY6EQ16553 131 aa6.88□□□□□ -1.31
RFX4-204ENST00000536688 A0A1B0GUV1 79 aa6.88□□□□□ -1.31
RFX4-204ENST00000536688 LRCOL1A6NCL2 159 aa6.88□□□□□ -1.31
RFX4-204ENST00000536688 ADORA2A-AS1P86434 159 aa6.88□□□□□ -1.31
RFX4-204ENST00000536688 DIRC1Q969H9 104 aa6.88□□□□□ -1.31
RFX4-204ENST00000536688 SORL1Q92673 2214 aa6.87□□□□□ -1.31
RFX4-204ENST00000536688 C19orf84I3L1E1 186 aa6.87□□□□□ -1.31
RFX4-204ENST00000536688 MAP6D1Q9H9H5 199 aa6.87□□□□□ -1.31
RFX4-204ENST00000536688 LOC100131303A0A0U1RQF7 123 aa6.86□□□□□ -1.31
RFX4-204ENST00000536688 ETDCA0A1B0GVM5 59 aa6.86□□□□□ -1.31
RFX4-204ENST00000536688 C16orf90A8MZG2 172 aa6.86□□□□□ -1.31
RFX4-204ENST00000536688 Q8N9L7 120 aa6.86□□□□□ -1.31
RFX4-204ENST00000536688 HIGD2BQ4VC39 106 aa6.86□□□□□ -1.31
RFX4-204ENST00000536688 LINC00612Q8N6U2 182 aa6.86□□□□□ -1.31
RFX4-204ENST00000536688 ADGRG4Q8IZF6 3080 aa6.85□□□□□ -1.31
RFX4-204ENST00000536688 TRGV4A0A0C4DH28 118 aa6.85□□□□□ -1.31
RFX4-204ENST00000536688 A6NN06 94 aa6.85□□□□□ -1.31
RFX4-204ENST00000536688 Q8NDZ9 215 aa6.85□□□□□ -1.31
RFX4-204ENST00000536688 FBN2P35556 2912 aa6.85□□□□□ -1.31
RFX4-204ENST00000536688 BRD3OSQ6XYD6 125 aa6.85□□□□□ -1.31
RFX4-204ENST00000536688 SMIM29Q86T20 159 aa6.85□□□□□ -1.31
RFX4-204ENST00000536688 UBE2E2Q96LR5 201 aa6.85□□□□□ -1.31
RFX4-204ENST00000536688 APOC4P55056 127 aa6.84□□□□□ -1.32
RFX4-204ENST00000536688 Q75L30 129 aa6.84□□□□□ -1.32
RFX4-204ENST00000536688 FAM30AQ9NZY2 134 aa6.84□□□□□ -1.32
RFX4-204ENST00000536688 CHKB-CPT1BH3BT56 60 aa6.83□□□□□ -1.32
RFX4-204ENST00000536688 ZNF73O43830 326 aaPredicted RBP6.83□□□□□ -1.32
RFX4-204ENST00000536688 VPREB1P12018 145 aa6.83□□□□□ -1.32
RFX4-204ENST00000536688 SPANXA2-OT1Q8N9U9 137 aa6.83□□□□□ -1.32
RFX4-204ENST00000536688 Q9BRP9 147 aa6.83□□□□□ -1.32
RFX4-204ENST00000536688 UBR5O95071 2799 aaPredicted RBP6.83□□□□□ -1.32
RFX4-204ENST00000536688 C7orf65Q6ZTY9 151 aa6.82□□□□□ -1.32
RFX4-204ENST00000536688 Q8N9P0 234 aaPredicted RBP6.82□□□□□ -1.32
RFX4-204ENST00000536688 DCHS2Q6V1P9 2916 aa6.82□□□□□ -1.32
RFX4-204ENST00000536688 COL12A1Q99715 3063 aa6.82□□□□□ -1.32
RFX4-204ENST00000536688 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.82□□□□□ -1.32
RFX4-204ENST00000536688 A0A0J9YWU9 116 aa6.82□□□□□ -1.32
RFX4-204ENST00000536688 HCG22E2RYF7 251 aa6.82□□□□□ -1.32
RFX4-204ENST00000536688 FLNCQ14315 2725 aa6.82□□□□□ -1.32
RFX4-204ENST00000536688 LOC101927531A0A1B0GV80 90 aa6.81□□□□□ -1.32
RFX4-204ENST00000536688 C16orf74Q96GX8 76 aa6.81□□□□□ -1.32
RFX4-204ENST00000536688 B9D2Q9BPU9 175 aa6.81□□□□□ -1.32
RFX4-204ENST00000536688 HIVEP3Q5T1R4 2406 aa6.81□□□□□ -1.32
RFX4-204ENST00000536688 CREBBPQ92793 2442 aa6.8□□□□□ -1.32
RFX4-204ENST00000536688 A8MU10 97 aa6.79□□□□□ -1.32
RFX4-204ENST00000536688 NOP10Q9NPE3 64 aaKnown RBP6.79□□□□□ -1.32
RFX4-204ENST00000536688 GVQW2A0A096LPI5 108 aaPredicted RBP6.79□□□□□ -1.32
RFX4-204ENST00000536688 LCA10Q71F78 164 aa6.79□□□□□ -1.32
RFX4-204ENST00000536688 CDC42SE1Q9NRR8 79 aa6.79□□□□□ -1.32
RFX4-204ENST00000536688 AKAP6Q13023 2319 aa6.78□□□□□ -1.32
RFX4-204ENST00000536688 C10orf25Q5T742 122 aa6.78□□□□□ -1.32
RFX4-204ENST00000536688 IGLV5-48A0A075B6I7 105 aa6.78□□□□□ -1.32
RFX4-204ENST00000536688 KCNQ1DNQ9H478 68 aa6.78□□□□□ -1.32
RFX4-204ENST00000536688 LRRK2Q5S007 2527 aa6.77□□□□□ -1.33
RFX4-204ENST00000536688 A0A1W2PPR1 153 aa6.77□□□□□ -1.33
RFX4-204ENST00000536688 H3BPC8 53 aa6.77□□□□□ -1.33
RFX4-204ENST00000536688 C9orf116Q5BN46 136 aaPredicted RBP6.77□□□□□ -1.33
RFX4-204ENST00000536688 C10orf99Q6UWK7 81 aa6.77□□□□□ -1.33
RFX4-204ENST00000536688 KLK12Q9UKR0 248 aa6.77□□□□□ -1.33
RFX4-204ENST00000536688 LRBAP50851 2863 aa6.77□□□□□ -1.33
RFX4-204ENST00000536688 LINC00528Q8N1L1 170 aa6.76□□□□□ -1.33
RFX4-204ENST00000536688 SPTSSBQ8NFR3 76 aa6.76□□□□□ -1.33
RFX4-204ENST00000536688 C11orf45Q8TAV5 145 aa6.76□□□□□ -1.33
RFX4-204ENST00000536688 LINC00208Q96KT6 92 aa6.76□□□□□ -1.33
RFX4-204ENST00000536688 UTP20O75691 2785 aaKnown RBP6.76□□□□□ -1.33
RFX4-204ENST00000536688 C8orf87E5RJ46 101 aa6.75□□□□□ -1.33
RFX4-204ENST00000536688 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
RFX4-204ENST00000536688 MP68P56378 58 aa6.75□□□□□ -1.33
RFX4-204ENST00000536688 ODF3L2Q3SX64 289 aa6.75□□□□□ -1.33
RFX4-204ENST00000536688 CHCHD10Q8WYQ3 142 aaPredicted RBP6.75□□□□□ -1.33
RFX4-204ENST00000536688 USP9YO00507 2555 aaPredicted RBP6.74□□□□□ -1.33
RFX4-204ENST00000536688 SLURP1P55000 103 aa6.74□□□□□ -1.33
RFX4-204ENST00000536688 ABCA2Q9BZC7 2435 aa6.74□□□□□ -1.33
RFX4-204ENST00000536688 A6NED7 52 aa6.73□□□□□ -1.33
RFX4-204ENST00000536688 C3orf84H3BNL1 204 aa6.73□□□□□ -1.33
RFX4-204ENST00000536688 HRNRQ86YZ3 2850 aaPredicted RBP6.73□□□□□ -1.33
RFX4-204ENST00000536688 KPRPQ5T749 579 aaPredicted RBP6.72□□□□□ -1.33
RFX4-204ENST00000536688 ST20-AS1Q8NBB2 130 aa6.72□□□□□ -1.33
RFX4-204ENST00000536688 WNK1Q9H4A3 2382 aa6.72□□□□□ -1.33
RFX4-204ENST00000536688 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.72□□□□□ -1.33
RFX4-204ENST00000536688 CMC4P56277 68 aaPredicted RBP6.72□□□□□ -1.33
RFX4-204ENST00000536688 UNQ6190/PRO20217Q6UXQ8 127 aa6.72□□□□□ -1.33
RFX4-204ENST00000536688 NOTCH2Q04721 2471 aa6.72□□□□□ -1.33
RFX4-204ENST00000536688 NBPF19A0A087WUL8 3843 aa6.71□□□□□ -1.33
RFX4-204ENST00000536688 SPAG11BQ08648 103 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms