RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 IGHV3-66A0A0C4DH42 116 aa1.56□□□□□ -2.16
SKA3-207ENST00000536239 A0A1W2PNM2 257 aa1.56□□□□□ -2.16
SKA3-207ENST00000536239 IGLV1-47P01700 117 aa1.56□□□□□ -2.16
SKA3-207ENST00000536239 ROMO1P60602 79 aa1.56□□□□□ -2.16
SKA3-207ENST00000536239 CCL14Q16627 93 aa1.56□□□□□ -2.16
SKA3-207ENST00000536239 C1orf134Q5TEV5 83 aa1.56□□□□□ -2.16
SKA3-207ENST00000536239 SPAG11AQ6PDA7 123 aa1.56□□□□□ -2.16
SKA3-207ENST00000536239 COA5Q86WW8 74 aa1.56□□□□□ -2.16
SKA3-207ENST00000536239 DEFB104AQ8WTQ1 72 aa1.56□□□□□ -2.16
SKA3-207ENST00000536239 ZNRD1Q9P1U0 126 aa1.56□□□□□ -2.16
SKA3-207ENST00000536239 ASCC3Q8N3C0 2202 aaKnown RBP1.56□□□□□ -2.16
SKA3-207ENST00000536239 H0Y9P7 68 aa1.55□□□□□ -2.16
SKA3-207ENST00000536239 IGHV1-46P01743 117 aa1.55□□□□□ -2.16
SKA3-207ENST00000536239 IGHV3-23P01764 117 aa1.55□□□□□ -2.16
SKA3-207ENST00000536239 CCL3L1P16619 93 aa1.55□□□□□ -2.16
SKA3-207ENST00000536239 IGHV1-2P23083 117 aa1.55□□□□□ -2.16
SKA3-207ENST00000536239 SPINK7P58062 85 aa1.55□□□□□ -2.16
SKA3-207ENST00000536239 PRR4Q16378 134 aa1.55□□□□□ -2.16
SKA3-207ENST00000536239 DEFB112Q30KQ8 113 aa1.55□□□□□ -2.16
SKA3-207ENST00000536239 KPRPQ5T749 579 aaPredicted RBP1.55□□□□□ -2.16
SKA3-207ENST00000536239 KAAG1Q9UBP8 84 aa1.55□□□□□ -2.16
SKA3-207ENST00000536239 SORL1Q92673 2214 aa1.55□□□□□ -2.16
SKA3-207ENST00000536239 URB1O60287 2271 aaKnown RBP1.55□□□□□ -2.16
SKA3-207ENST00000536239 TRGV4A0A0C4DH28 118 aa1.54□□□□□ -2.16
SKA3-207ENST00000536239 PRB3Q04118 309 aaPredicted RBP1.54□□□□□ -2.16
SKA3-207ENST00000536239 CSAG1Q6PB30 78 aa1.54□□□□□ -2.16
SKA3-207ENST00000536239 SPATA8Q6RVD6 105 aa1.54□□□□□ -2.16
SKA3-207ENST00000536239 Q6ZQY7 126 aa1.54□□□□□ -2.16
SKA3-207ENST00000536239 ADM2Q7Z4H4 148 aa1.54□□□□□ -2.16
SKA3-207ENST00000536239 CNEP1R1Q8N9A8 125 aa1.54□□□□□ -2.16
SKA3-207ENST00000536239 Q8N9L7 120 aa1.54□□□□□ -2.16
SKA3-207ENST00000536239 C9orf163Q8N9P6 203 aa1.54□□□□□ -2.16
SKA3-207ENST00000536239 ST20-AS1Q8NBB2 130 aa1.54□□□□□ -2.16
SKA3-207ENST00000536239 DEFB108BQ8NET1 73 aa1.54□□□□□ -2.16
SKA3-207ENST00000536239 TTTY12Q9BZ98 90 aa1.54□□□□□ -2.16
SKA3-207ENST00000536239 PRRC2BQ5JSZ5 2229 aaKnown RBP1.54□□□□□ -2.16
SKA3-207ENST00000536239 A0A087WSZ3 146 aa1.53□□□□□ -2.16
SKA3-207ENST00000536239 PRB1P04280 392 aa1.53□□□□□ -2.16
SKA3-207ENST00000536239 REG3AQ06141 175 aa1.53□□□□□ -2.16
SKA3-207ENST00000536239 MIR22HGQ0VDD5 57 aa1.53□□□□□ -2.16
SKA3-207ENST00000536239 Q8IZM0 81 aa1.53□□□□□ -2.16
SKA3-207ENST00000536239 TOMM7Q9P0U1 55 aa1.53□□□□□ -2.16
SKA3-207ENST00000536239 DHRS4-AS1Q9P1J3 65 aa1.53□□□□□ -2.16
SKA3-207ENST00000536239 DPM3Q9P2X0 92 aa1.53□□□□□ -2.16
SKA3-207ENST00000536239 IGLV5-48A0A075B6I7 105 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 LINC00959A0A1B0GUT2 108 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 ODF3BA8MYP8 253 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 IGLV6-57P01721 117 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 IGHV3-11P01762 117 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 MSMBP08118 114 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 DEFB133Q30KQ1 61 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 MINOS1Q5TGZ0 78 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 Q8N9W7 124 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 Q8NDZ9 215 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 KLK12Q9UKR0 248 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 ABCA1O95477 2261 aa1.52□□□□□ -2.17
SKA3-207ENST00000536239 MED13LQ71F56 2210 aa1.51□□□□□ -2.17
SKA3-207ENST00000536239 ASXL3Q9C0F0 2248 aa1.51□□□□□ -2.17
SKA3-207ENST00000536239 IGKV2D-24A0A075B6R9 120 aa1.51□□□□□ -2.17
SKA3-207ENST00000536239 DEFB131BA0A096LNP1 70 aa1.51□□□□□ -2.17
SKA3-207ENST00000536239 IGHV3-74A0A0B4J1X5 117 aa1.51□□□□□ -2.17
SKA3-207ENST00000536239 KRTAP25-1Q3LHN0 102 aa1.51□□□□□ -2.17
SKA3-207ENST00000536239 SPRR4Q96PI1 79 aa1.51□□□□□ -2.17
SKA3-207ENST00000536239 FAM215AQ9Y5M1 114 aa1.51□□□□□ -2.17
SKA3-207ENST00000536239 PLCE1Q9P212 2302 aa1.51□□□□□ -2.17
SKA3-207ENST00000536239 HIVEP2P31629 2446 aa1.5□□□□□ -2.17
SKA3-207ENST00000536239 WDR87Q6ZQQ6 2873 aa1.5□□□□□ -2.17
SKA3-207ENST00000536239 UQCR11O14957 56 aa1.5□□□□□ -2.17
SKA3-207ENST00000536239 C1orf137Q5JT78 98 aa1.5□□□□□ -2.17
SKA3-207ENST00000536239 LYPD2Q6UXB3 125 aa1.5□□□□□ -2.17
SKA3-207ENST00000536239 USMG5Q96IX5 58 aa1.5□□□□□ -2.17
SKA3-207ENST00000536239 RHPN1-AS1Q9BWJ2 59 aa1.5□□□□□ -2.17
SKA3-207ENST00000536239 MINOS1-NBL1R4GNA1 71 aa1.5□□□□□ -2.17
SKA3-207ENST00000536239 KNL1Q8NG31 2342 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 ICE1Q9Y2F5 2266 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 DOPEY2Q9Y3R5 2298 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 IGLV10-54A0A075B6I4 117 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 IGLV1-50A0A075B6I6 118 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 A8MTW9 85 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 H3BUA1 57 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 K7EQZ3 153 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 K7ERS5 55 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 ZNF861PO60384 105 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 HRES1P13985 223 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 COX7A1P24310 79 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 DMAC1Q96GE9 116 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 TP53AIP1Q9HCN2 124 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 COL6A3P12111 3177 aa1.49□□□□□ -2.17
SKA3-207ENST00000536239 CEP350Q5VT06 3117 aa1.48□□□□□ -2.17
SKA3-207ENST00000536239 IGKV3-7A0A075B6H7 116 aa1.48□□□□□ -2.17
SKA3-207ENST00000536239 A0A1B0GU69 56 aa1.48□□□□□ -2.17
SKA3-207ENST00000536239 A8MWP4 228 aa1.48□□□□□ -2.17
SKA3-207ENST00000536239 P0C880 135 aa1.48□□□□□ -2.17
SKA3-207ENST00000536239 CHTF8P0CG12 524 aa1.48□□□□□ -2.17
SKA3-207ENST00000536239 DEFB1P60022 68 aa1.48□□□□□ -2.17
SKA3-207ENST00000536239 DEFB103AP81534 67 aa1.48□□□□□ -2.17
SKA3-207ENST00000536239 SPINK13Q1W4C9 94 aa1.48□□□□□ -2.17
SKA3-207ENST00000536239 LINC00483Q53H64 154 aa1.48□□□□□ -2.17
SKA3-207ENST00000536239 C20orf166-AS1Q96NR2 134 aa1.48□□□□□ -2.17
SKA3-207ENST00000536239 CAMK2N2Q96S95 79 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms