RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 DPH3Q96FX2 82 aa10.96□□□□□ -0.65
MCF2L-232ENST00000535094 C4orf26Q17RF5 130 aa10.96□□□□□ -0.66
MCF2L-232ENST00000535094 IGHV4-28A0A0C4DH34 117 aa10.95□□□□□ -0.66
MCF2L-232ENST00000535094 DIRC1Q969H9 104 aa10.93□□□□□ -0.66
MCF2L-232ENST00000535094 CAMK2N2Q96S95 79 aa10.93□□□□□ -0.66
MCF2L-232ENST00000535094 TRBV10-3A0A0K0K1G6 114 aa10.92□□□□□ -0.66
MCF2L-232ENST00000535094 FAM236DA0A1B0GTK5 79 aa10.92□□□□□ -0.66
MCF2L-232ENST00000535094 FAM236CP0DP71 79 aa10.92□□□□□ -0.66
MCF2L-232ENST00000535094 M0R2N4 97 aa10.91□□□□□ -0.66
MCF2L-232ENST00000535094 LINC00575Q6W349 94 aa10.91□□□□□ -0.66
MCF2L-232ENST00000535094 CSNK1G2-AS1Q8NCQ2 148 aa10.91□□□□□ -0.66
MCF2L-232ENST00000535094 ATP5EP2Q5VTU8 51 aa10.9□□□□□ -0.67
MCF2L-232ENST00000535094 Q8N9L7 120 aa10.9□□□□□ -0.67
MCF2L-232ENST00000535094 RMI2Q96E14 147 aa10.9□□□□□ -0.67
MCF2L-232ENST00000535094 A0A1B0GUV1 79 aa10.89□□□□□ -0.67
MCF2L-232ENST00000535094 NANOS2P60321 138 aaKnown RBP10.89□□□□□ -0.67
MCF2L-232ENST00000535094 Q6ZVQ6 151 aa10.89□□□□□ -0.67
MCF2L-232ENST00000535094 LINC01547P58512 204 aaPredicted RBP10.88□□□□□ -0.67
MCF2L-232ENST00000535094 C19orf73Q9NVV2 129 aa10.88□□□□□ -0.67
MCF2L-232ENST00000535094 TRAV10A0A0B4J240 114 aa10.88□□□□□ -0.67
MCF2L-232ENST00000535094 C3orf84H3BNL1 204 aa10.88□□□□□ -0.67
MCF2L-232ENST00000535094 COX7BP24311 80 aa10.88□□□□□ -0.67
MCF2L-232ENST00000535094 F8WEM9 126 aa10.86□□□□□ -0.67
MCF2L-232ENST00000535094 PRB2P02812 416 aaPredicted RBP10.86□□□□□ -0.67
MCF2L-232ENST00000535094 NDUFC2O95298 119 aa10.86□□□□□ -0.67
MCF2L-232ENST00000535094 COX17Q14061 63 aa10.86□□□□□ -0.67
MCF2L-232ENST00000535094 Q8NDZ9 215 aa10.86□□□□□ -0.67
MCF2L-232ENST00000535094 LY6G6DO95868 133 aa10.85□□□□□ -0.67
MCF2L-232ENST00000535094 HIVEP1P15822 2718 aa10.85□□□□□ -0.67
MCF2L-232ENST00000535094 SPART-AS1P0CW21 52 aa10.85□□□□□ -0.67
MCF2L-232ENST00000535094 APOC4P55056 127 aa10.85□□□□□ -0.67
MCF2L-232ENST00000535094 KIAA0087Q14695 138 aa10.85□□□□□ -0.67
MCF2L-232ENST00000535094 SPATA3Q8NHX4 192 aa10.85□□□□□ -0.67
MCF2L-232ENST00000535094 CELA1Q9UNI1 258 aa10.85□□□□□ -0.67
MCF2L-232ENST00000535094 IGKV2D-24A0A075B6R9 120 aa10.84□□□□□ -0.67
MCF2L-232ENST00000535094 NOTCH1P46531 2555 aa10.84□□□□□ -0.67
MCF2L-232ENST00000535094 ZNF73O43830 326 aaPredicted RBP10.84□□□□□ -0.67
MCF2L-232ENST00000535094 OBSCN-AS1Q96MR7 158 aa10.84□□□□□ -0.67
MCF2L-232ENST00000535094 NREPQ16612 68 aa10.83□□□□□ -0.68
MCF2L-232ENST00000535094 X6R8D5 127 aa10.83□□□□□ -0.68
MCF2L-232ENST00000535094 Q6ZQT0 140 aa10.82□□□□□ -0.68
MCF2L-232ENST00000535094 VWFP04275 2813 aa10.81□□□□□ -0.68
MCF2L-232ENST00000535094 LYRM9A8MSI8 78 aa10.81□□□□□ -0.68
MCF2L-232ENST00000535094 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.81□□□□□ -0.68
MCF2L-232ENST00000535094 MPLKIPQ8TAP9 179 aa10.81□□□□□ -0.68
MCF2L-232ENST00000535094 MUC7Q8TAX7 377 aa10.81□□□□□ -0.68
MCF2L-232ENST00000535094 NKAPP1Q8N9T2 125 aa10.8□□□□□ -0.68
MCF2L-232ENST00000535094 C1orf43Q9BWL3 253 aa10.8□□□□□ -0.68
MCF2L-232ENST00000535094 TRAV7A0A075B6U4 112 aa10.8□□□□□ -0.68
MCF2L-232ENST00000535094 MAST4O15021 2626 aa10.8□□□□□ -0.68
MCF2L-232ENST00000535094 RPS28P62857 69 aaKnown RBP10.8□□□□□ -0.68
MCF2L-232ENST00000535094 BAHCC1Q9P281 2608 aa10.79□□□□□ -0.68
MCF2L-232ENST00000535094 C9orf66Q5T8R8 295 aa10.78□□□□□ -0.68
MCF2L-232ENST00000535094 OXTP01178 125 aa10.78□□□□□ -0.68
MCF2L-232ENST00000535094 TM2D3Q9BRN9 247 aa10.78□□□□□ -0.68
MCF2L-232ENST00000535094 MRAPQ8TCY5 172 aa10.77□□□□□ -0.69
MCF2L-232ENST00000535094 NBEAL1Q6ZS30 2694 aa10.76□□□□□ -0.69
MCF2L-232ENST00000535094 C6orf48Q9UBA6 75 aa10.76□□□□□ -0.69
MCF2L-232ENST00000535094 PDE6GP18545 87 aa10.75□□□□□ -0.69
MCF2L-232ENST00000535094 LELP1Q5T871 98 aa10.75□□□□□ -0.69
MCF2L-232ENST00000535094 INAFM1C9JVW0 142 aa10.75□□□□□ -0.69
MCF2L-232ENST00000535094 BPY2O14599 106 aa10.75□□□□□ -0.69
MCF2L-232ENST00000535094 WFDC10BQ8IUB3 73 aa10.74□□□□□ -0.69
MCF2L-232ENST00000535094 PKIGQ9Y2B9 76 aa10.74□□□□□ -0.69
MCF2L-232ENST00000535094 RETNQ9HD89 108 aa10.74□□□□□ -0.69
MCF2L-232ENST00000535094 RPL37AP8A6NKH3 93 aa10.73□□□□□ -0.69
MCF2L-232ENST00000535094 BRK1Q8WUW1 75 aa10.73□□□□□ -0.69
MCF2L-232ENST00000535094 A0A0U1RQV1 116 aa10.72□□□□□ -0.69
MCF2L-232ENST00000535094 LRCOL1A6NCL2 159 aa10.72□□□□□ -0.69
MCF2L-232ENST00000535094 KRTAP1-3Q8IUG1 177 aa10.72□□□□□ -0.69
MCF2L-232ENST00000535094 MGAM2Q2M2H8 2515 aa10.72□□□□□ -0.69
MCF2L-232ENST00000535094 MIFP14174 115 aa10.71□□□□□ -0.69
MCF2L-232ENST00000535094 Q6ZRU5 148 aa10.71□□□□□ -0.69
MCF2L-232ENST00000535094 PRR4Q16378 134 aa10.7□□□□□ -0.7
MCF2L-232ENST00000535094 LINC00167Q96N53 147 aa10.7□□□□□ -0.7
MCF2L-232ENST00000535094 KPRPQ5T749 579 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-232ENST00000535094 H7BZZ5 65 aa10.69□□□□□ -0.7
MCF2L-232ENST00000535094 SERP1Q9Y6X1 66 aa10.69□□□□□ -0.7
MCF2L-232ENST00000535094 STAB1Q9NY15 2570 aa10.68□□□□□ -0.7
MCF2L-232ENST00000535094 IGLV6-57P01721 117 aa10.68□□□□□ -0.7
MCF2L-232ENST00000535094 C16orf95Q9H693 158 aa10.68□□□□□ -0.7
MCF2L-232ENST00000535094 FAM30AQ9NZY2 134 aa10.68□□□□□ -0.7
MCF2L-232ENST00000535094 IGHV4-30-4P0DP06 118 aa10.67□□□□□ -0.7
MCF2L-232ENST00000535094 KRTAP10-3P60369 221 aa10.67□□□□□ -0.7
MCF2L-232ENST00000535094 M0R378 163 aa10.67□□□□□ -0.7
MCF2L-232ENST00000535094 LOC110117498A0A087WWA1 95 aa10.67□□□□□ -0.7
MCF2L-232ENST00000535094 J3QKU1 62 aa10.67□□□□□ -0.7
MCF2L-232ENST00000535094 FUSP35637 526 aaKnown RBP eCLIP10.67□□□□□ -0.79e-6■■■□□ 18.4
MCF2L-232ENST00000535094 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
MCF2L-232ENST00000535094 LINC00474Q9P2X8 69 aa10.67□□□□□ -0.7
MCF2L-232ENST00000535094 PDZD2O15018 2839 aa10.66□□□□□ -0.7
MCF2L-232ENST00000535094 NDUFC2-KCTD14E9PQ53 114 aa10.66□□□□□ -0.7
MCF2L-232ENST00000535094 UBE2BP63146 152 aa10.66□□□□□ -0.7
MCF2L-232ENST00000535094 OXLD1Q5BKU9 147 aa10.66□□□□□ -0.7
MCF2L-232ENST00000535094 TMEM254Q8TBM7 123 aa10.66□□□□□ -0.7
MCF2L-232ENST00000535094 ETDCA0A1B0GVM5 59 aa10.66□□□□□ -0.7
MCF2L-232ENST00000535094 COL6A5A8TX70 2615 aa10.65□□□□□ -0.7
MCF2L-232ENST00000535094 A0A0J9YWU9 116 aa10.64□□□□□ -0.71
MCF2L-232ENST00000535094 NBPF19A0A087WUL8 3843 aa10.64□□□□□ -0.71
MCF2L-232ENST00000535094 TENM1Q9UKZ4 2725 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms