RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TNXBP22105 4242 aa6.37□□□□□ -1.39
CAPN1-225ENST00000533704 LINC01546A6NGU7 62 aa6.36□□□□□ -1.39
CAPN1-225ENST00000533704 SPATA45Q537H7 98 aa6.36□□□□□ -1.39
CAPN1-225ENST00000533704 LCE2BO14633 110 aa6.35□□□□□ -1.39
CAPN1-225ENST00000533704 CXCL5P42830 114 aa6.35□□□□□ -1.39
CAPN1-225ENST00000533704 C22orf24Q9Y442 160 aa6.35□□□□□ -1.39
CAPN1-225ENST00000533704 IGLV5-45A0A087WSX0 123 aa6.34□□□□□ -1.39
CAPN1-225ENST00000533704 H0Y9J4 135 aa6.34□□□□□ -1.39
CAPN1-225ENST00000533704 H3BRM9 83 aa6.34□□□□□ -1.39
CAPN1-225ENST00000533704 SERF1AO75920 110 aa6.34□□□□□ -1.39
CAPN1-225ENST00000533704 KRTDAPP60985 99 aa6.34□□□□□ -1.39
CAPN1-225ENST00000533704 UBE2V1Q13404 147 aa6.34□□□□□ -1.39
CAPN1-225ENST00000533704 PMCHL1Q16048 86 aa6.34□□□□□ -1.39
CAPN1-225ENST00000533704 PET117Q6UWS5 81 aa6.34□□□□□ -1.39
CAPN1-225ENST00000533704 PRR26Q8N8Z3 221 aa6.34□□□□□ -1.39
CAPN1-225ENST00000533704 C18orf32Q8TCD1 76 aa6.34□□□□□ -1.39
CAPN1-225ENST00000533704 HBDP02042 147 aa6.33□□□□□ -1.4
CAPN1-225ENST00000533704 URB1-AS1Q96HZ7 61 aa6.33□□□□□ -1.4
CAPN1-225ENST00000533704 A0A096LNJ9 63 aa6.32□□□□□ -1.4
CAPN1-225ENST00000533704 IGLC3P0DOY3 106 aa6.32□□□□□ -1.4
CAPN1-225ENST00000533704 GAGE10A6NGK3 116 aa6.31□□□□□ -1.4
CAPN1-225ENST00000533704 ATP5LO75964 103 aa6.31□□□□□ -1.4
CAPN1-225ENST00000533704 MRPL55Q7Z7F7 128 aaKnown RBP6.31□□□□□ -1.4
CAPN1-225ENST00000533704 RPL37AP8A6NKH3 93 aa6.3□□□□□ -1.4
CAPN1-225ENST00000533704 ZNF22P17026 224 aaPredicted RBP6.3□□□□□ -1.4
CAPN1-225ENST00000533704 PFN2P35080 140 aa6.3□□□□□ -1.4
CAPN1-225ENST00000533704 NKAPP1Q8N9T2 125 aa6.3□□□□□ -1.4
CAPN1-225ENST00000533704 VPS25Q9BRG1 176 aa6.3□□□□□ -1.4
CAPN1-225ENST00000533704 UBR4Q5T4S7 5183 aa6.29□□□□□ -1.4
CAPN1-225ENST00000533704 NUPR1O60356 82 aa6.29□□□□□ -1.4
CAPN1-225ENST00000533704 LINC00310P59036 64 aa6.29□□□□□ -1.4
CAPN1-225ENST00000533704 TMEM170BQ5T4T1 132 aa6.29□□□□□ -1.4
CAPN1-225ENST00000533704 LINC00167Q96N53 147 aa6.29□□□□□ -1.4
CAPN1-225ENST00000533704 TP73-AS1Q9UF72 201 aa6.29□□□□□ -1.4
CAPN1-225ENST00000533704 C11orf86A6NJI1 115 aa6.28□□□□□ -1.4
CAPN1-225ENST00000533704 K7ERU9 68 aa6.28□□□□□ -1.4
CAPN1-225ENST00000533704 ZNF861PO60384 105 aa6.28□□□□□ -1.4
CAPN1-225ENST00000533704 KRTAP1-4P0C5Y4 121 aa6.28□□□□□ -1.4
CAPN1-225ENST00000533704 VAMP3Q15836 100 aa6.28□□□□□ -1.4
CAPN1-225ENST00000533704 ZNF625Q96I27 306 aaPredicted RBP6.28□□□□□ -1.4
CAPN1-225ENST00000533704 IGLV1-50A0A075B6I6 118 aa6.27□□□□□ -1.41
CAPN1-225ENST00000533704 IGLV5-39A0A0G2JS06 123 aa6.27□□□□□ -1.41
CAPN1-225ENST00000533704 BCE1O60756 84 aa6.27□□□□□ -1.41
CAPN1-225ENST00000533704 C3orf79P0CE67 100 aa6.27□□□□□ -1.41
CAPN1-225ENST00000533704 HINT1P49773 126 aaPredicted RBP6.27□□□□□ -1.41
CAPN1-225ENST00000533704 CHTOPQ9Y3Y2 248 aaKnown RBP6.27□□□□□ -1.41
CAPN1-225ENST00000533704 HSBP1L1C9JCN9 74 aa6.26□□□□□ -1.41
CAPN1-225ENST00000533704 RPL28P46779 137 aaKnown RBP6.26□□□□□ -1.41
CAPN1-225ENST00000533704 ERG28Q9UKR5 140 aa6.26□□□□□ -1.41
CAPN1-225ENST00000533704 IGKV2-28A0A075B6P5 120 aa6.25□□□□□ -1.41
CAPN1-225ENST00000533704 HSBP1O75506 76 aa6.25□□□□□ -1.41
CAPN1-225ENST00000533704 IGKV2D-28P01615 120 aa6.25□□□□□ -1.41
CAPN1-225ENST00000533704 RPL13AP40429 203 aaKnown RBP6.25□□□□□ -1.41
CAPN1-225ENST00000533704 PMCHL2Q9BQD1 86 aa6.25□□□□□ -1.41
CAPN1-225ENST00000533704 SND1-IT1Q9HBX3 110 aa6.25□□□□□ -1.41
CAPN1-225ENST00000533704 IGLV5-37A0A075B6J1 123 aa6.24□□□□□ -1.41
CAPN1-225ENST00000533704 UBE2AP49459 152 aa6.24□□□□□ -1.41
CAPN1-225ENST00000533704 OCIAD2Q56VL3 154 aa6.24□□□□□ -1.41
CAPN1-225ENST00000533704 IFI27L1Q96BM0 104 aa6.24□□□□□ -1.41
CAPN1-225ENST00000533704 CHCHD1Q96BP2 118 aaKnown RBP6.24□□□□□ -1.41
CAPN1-225ENST00000533704 A0A0U1RRA0 63 aa6.23□□□□□ -1.41
CAPN1-225ENST00000533704 H0Y8G0 127 aa6.23□□□□□ -1.41
CAPN1-225ENST00000533704 LINC00158P58513 81 aa6.22□□□□□ -1.41
CAPN1-225ENST00000533704 RPL24P83731 157 aaKnown RBP6.22□□□□□ -1.41
CAPN1-225ENST00000533704 SLC25A34Q6PIV7 304 aa6.22□□□□□ -1.41
CAPN1-225ENST00000533704 GTF2H5Q6ZYL4 71 aa6.22□□□□□ -1.41
CAPN1-225ENST00000533704 FAM19A2Q8N3H0 131 aa6.22□□□□□ -1.41
CAPN1-225ENST00000533704 LRP2P98164 4655 aa6.22□□□□□ -1.41
CAPN1-225ENST00000533704 TRAV12-1A0A0B4J245 112 aa6.21□□□□□ -1.42
CAPN1-225ENST00000533704 TMEM223A0PJW6 202 aa6.21□□□□□ -1.42
CAPN1-225ENST00000533704 VPREB1P12018 145 aa6.21□□□□□ -1.42
CAPN1-225ENST00000533704 COX17Q14061 63 aa6.21□□□□□ -1.42
CAPN1-225ENST00000533704 SFTA2Q6UW10 78 aa6.21□□□□□ -1.42
CAPN1-225ENST00000533704 TMEM238C9JI98 176 aa6.2□□□□□ -1.42
CAPN1-225ENST00000533704 TAX1BP3O14907 124 aa6.2□□□□□ -1.42
CAPN1-225ENST00000533704 TSPAN13O95857 204 aa6.2□□□□□ -1.42
CAPN1-225ENST00000533704 PRLHP81277 87 aa6.2□□□□□ -1.42
CAPN1-225ENST00000533704 FAM19A1Q7Z5A9 133 aa6.2□□□□□ -1.42
CAPN1-225ENST00000533704 ATOH7Q8N100 152 aa6.2□□□□□ -1.42
CAPN1-225ENST00000533704 ANAPC11Q9NYG5 84 aa6.2□□□□□ -1.42
CAPN1-225ENST00000533704 A0A087X002 238 aa6.19□□□□□ -1.42
CAPN1-225ENST00000533704 A6NDN8 102 aa6.19□□□□□ -1.42
CAPN1-225ENST00000533704 CRYGAP11844 174 aa6.19□□□□□ -1.42
CAPN1-225ENST00000533704 PRR4Q16378 134 aa6.19□□□□□ -1.42
CAPN1-225ENST00000533704 MEIG1Q5JSS6 88 aa6.19□□□□□ -1.42
CAPN1-225ENST00000533704 BVES-AS1Q5T3Y7 98 aa6.19□□□□□ -1.42
CAPN1-225ENST00000533704 Q8NDZ9 215 aa6.19□□□□□ -1.42
CAPN1-225ENST00000533704 TYMSOSQ8TAI1 123 aa6.19□□□□□ -1.42
CAPN1-225ENST00000533704 SMIM13P0DJ93 91 aa6.18□□□□□ -1.42
CAPN1-225ENST00000533704 SCGB1A1P11684 91 aa6.18□□□□□ -1.42
CAPN1-225ENST00000533704 KRTAP13-1Q8IUC0 172 aa6.18□□□□□ -1.42
CAPN1-225ENST00000533704 MAP1LC3CQ9BXW4 147 aa6.18□□□□□ -1.42
CAPN1-225ENST00000533704 TMEM126AQ9H061 195 aa6.18□□□□□ -1.42
CAPN1-225ENST00000533704 HSPB8Q9UJY1 196 aa6.18□□□□□ -1.42
CAPN1-225ENST00000533704 LEPROTL1O95214 131 aa6.17□□□□□ -1.42
CAPN1-225ENST00000533704 SYS1-DBNDD2H3BUS1 97 aa6.16□□□□□ -1.42
CAPN1-225ENST00000533704 M0R378 163 aa6.16□□□□□ -1.42
CAPN1-225ENST00000533704 Q6ZVH6 145 aa6.16□□□□□ -1.42
CAPN1-225ENST00000533704 BOD1L2Q8IYS8 172 aa6.16□□□□□ -1.42
CAPN1-225ENST00000533704 SVIPQ8NHG7 77 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms