RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 NDUFA12Q9UI09 145 aa3.68□□□□□ -1.82
C11orf54-212ENST00000533154 KLK9Q9UKQ9 250 aa3.68□□□□□ -1.82
C11orf54-212ENST00000533154 UBE2D4Q9Y2X8 147 aa3.68□□□□□ -1.82
C11orf54-212ENST00000533154 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
C11orf54-212ENST00000533154 RBMY1BA6NDE4 496 aaKnown RBP3.67□□□□□ -1.82
C11orf54-212ENST00000533154 RBMY1EA6NEQ0 496 aaKnown RBP3.67□□□□□ -1.82
C11orf54-212ENST00000533154 BUB1B-PAK6H3BSN5 160 aa3.67□□□□□ -1.82
C11orf54-212ENST00000533154 NDUFA1O15239 70 aa3.67□□□□□ -1.82
C11orf54-212ENST00000533154 CTSGP08311 255 aa3.67□□□□□ -1.82
C11orf54-212ENST00000533154 RBMY1DP0C7P1 496 aaKnown RBP3.67□□□□□ -1.82
C11orf54-212ENST00000533154 RBMY1A1P0DJD3 496 aaKnown RBP3.67□□□□□ -1.82
C11orf54-212ENST00000533154 RNASE3P12724 160 aaKnown RBP3.67□□□□□ -1.82
C11orf54-212ENST00000533154 RBMY1FQ15415 496 aaKnown RBP3.67□□□□□ -1.82
C11orf54-212ENST00000533154 ZFAND2AQ8N6M9 145 aa3.67□□□□□ -1.82
C11orf54-212ENST00000533154 C20orf203Q8NBC4 194 aa3.67□□□□□ -1.82
C11orf54-212ENST00000533154 PKIGQ9Y2B9 76 aa3.67□□□□□ -1.82
C11orf54-212ENST00000533154 NBEAL2Q6ZNJ1 2754 aa3.67□□□□□ -1.82
C11orf54-212ENST00000533154 IGKV3D-7A0A0C4DH55 119 aa3.66□□□□□ -1.82
C11orf54-212ENST00000533154 TRBV10-3A0A0K0K1G6 114 aa3.66□□□□□ -1.82
C11orf54-212ENST00000533154 H7BZZ5 65 aa3.66□□□□□ -1.82
C11orf54-212ENST00000533154 XCL1P47992 114 aa3.66□□□□□ -1.82
C11orf54-212ENST00000533154 FP248Q71RG6 208 aaPredicted RBP3.66□□□□□ -1.82
C11orf54-212ENST00000533154 VMO1Q7Z5L0 202 aa3.66□□□□□ -1.82
C11orf54-212ENST00000533154 Q8N2B8 174 aa3.66□□□□□ -1.82
C11orf54-212ENST00000533154 XCL2Q9UBD3 114 aa3.66□□□□□ -1.82
C11orf54-212ENST00000533154 S4R3C0 116 aa3.66□□□□□ -1.82
C11orf54-212ENST00000533154 PRKDCP78527 4128 aaKnown RBP3.66□□□□□ -1.82
C11orf54-212ENST00000533154 TRAV7A0A075B6U4 112 aa3.65□□□□□ -1.83
C11orf54-212ENST00000533154 A0A087WVE0 104 aa3.65□□□□□ -1.83
C11orf54-212ENST00000533154 KLKP1Q107X0 134 aa3.65□□□□□ -1.83
C11orf54-212ENST00000533154 CIRBPQ14011 172 aaKnown RBP3.65□□□□□ -1.83
C11orf54-212ENST00000533154 C15orf32Q32M92 178 aa3.65□□□□□ -1.83
C11orf54-212ENST00000533154 LYPD5Q6UWN5 251 aa3.65□□□□□ -1.83
C11orf54-212ENST00000533154 FAM223AQ8IWN6 122 aa3.65□□□□□ -1.83
C11orf54-212ENST00000533154 LY6G5BQ8NDX9 201 aa3.65□□□□□ -1.83
C11orf54-212ENST00000533154 LINC00308Q8TCZ7 52 aa3.65□□□□□ -1.83
C11orf54-212ENST00000533154 CCL17Q92583 94 aa3.65□□□□□ -1.83
C11orf54-212ENST00000533154 LINC00846Q9NV44 126 aa3.65□□□□□ -1.83
C11orf54-212ENST00000533154 TRAV12-3A0A0B4J271 114 aa3.64□□□□□ -1.83
C11orf54-212ENST00000533154 CLPSL1A2RUU4 121 aa3.64□□□□□ -1.83
C11orf54-212ENST00000533154 NDUFC1O43677 76 aa3.64□□□□□ -1.83
C11orf54-212ENST00000533154 TRBV12-3P01733 135 aa3.64□□□□□ -1.83
C11orf54-212ENST00000533154 CD28P10747 220 aa3.64□□□□□ -1.83
C11orf54-212ENST00000533154 RPL28P46779 137 aaKnown RBP3.64□□□□□ -1.83
C11orf54-212ENST00000533154 KRTAP10-3P60369 221 aa3.64□□□□□ -1.83
C11orf54-212ENST00000533154 LYPD2Q6UXB3 125 aa3.64□□□□□ -1.83
C11orf54-212ENST00000533154 CMYA5Q8N3K9 4069 aa3.64□□□□□ -1.83
C11orf54-212ENST00000533154 LYRM9A8MSI8 78 aa3.63□□□□□ -1.83
C11orf54-212ENST00000533154 M0QY20 66 aa3.63□□□□□ -1.83
C11orf54-212ENST00000533154 GIG44P09565 113 aaPredicted RBP3.63□□□□□ -1.83
C11orf54-212ENST00000533154 CASC10Q5T4H9 136 aa3.63□□□□□ -1.83
C11orf54-212ENST00000533154 C1orf158Q8N1D5 194 aa3.63□□□□□ -1.83
C11orf54-212ENST00000533154 C20orf197Q8N268 126 aa3.63□□□□□ -1.83
C11orf54-212ENST00000533154 C7orf33Q8WU49 177 aa3.63□□□□□ -1.83
C11orf54-212ENST00000533154 FAM104AQ969W3 186 aa3.63□□□□□ -1.83
C11orf54-212ENST00000533154 TRAV13-2A0A0B4J235 113 aa3.62□□□□□ -1.83
C11orf54-212ENST00000533154 H0YGX0 51 aa3.62□□□□□ -1.83
C11orf54-212ENST00000533154 GNRH2O43555 120 aa3.62□□□□□ -1.83
C11orf54-212ENST00000533154 CCKP06307 115 aa3.62□□□□□ -1.83
C11orf54-212ENST00000533154 NDPQ00604 133 aa3.62□□□□□ -1.83
C11orf54-212ENST00000533154 DEFB112Q30KQ8 113 aa3.62□□□□□ -1.83
C11orf54-212ENST00000533154 SOSTDC1Q6X4U4 206 aa3.62□□□□□ -1.83
C11orf54-212ENST00000533154 BRD3OSQ6XYD6 125 aa3.62□□□□□ -1.83
C11orf54-212ENST00000533154 Q8N6K4 173 aa3.62□□□□□ -1.83
C11orf54-212ENST00000533154 C14orf132Q9NPU4 83 aa3.62□□□□□ -1.83
C11orf54-212ENST00000533154 LAMTOR3Q9UHA4 124 aa3.62□□□□□ -1.83
C11orf54-212ENST00000533154 TRBV7-6A0A0J9YX20 115 aa3.61□□□□□ -1.83
C11orf54-212ENST00000533154 KLLNB2CW77 178 aa3.61□□□□□ -1.83
C11orf54-212ENST00000533154 COX7A1P24310 79 aa3.61□□□□□ -1.83
C11orf54-212ENST00000533154 FAM19A3Q7Z5A8 133 aa3.61□□□□□ -1.83
C11orf54-212ENST00000533154 TYMSOSQ8TAI1 123 aa3.61□□□□□ -1.83
C11orf54-212ENST00000533154 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
C11orf54-212ENST00000533154 RETNQ9HD89 108 aa3.61□□□□□ -1.83
C11orf54-212ENST00000533154 Q9UF83 564 aa3.61□□□□□ -1.83
C11orf54-212ENST00000533154 TRAV23DV6A0A075B6W5 121 aa3.6□□□□□ -1.83
C11orf54-212ENST00000533154 ODF3BA8MYP8 253 aa3.6□□□□□ -1.83
C11orf54-212ENST00000533154 JMJD7-PLA2G4BH0Y9G9 81 aa3.6□□□□□ -1.83
C11orf54-212ENST00000533154 CRPP02741 224 aa3.6□□□□□ -1.83
C11orf54-212ENST00000533154 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
C11orf54-212ENST00000533154 BLCAPP62952 87 aa3.6□□□□□ -1.83
C11orf54-212ENST00000533154 KIAA0087Q14695 138 aa3.6□□□□□ -1.83
C11orf54-212ENST00000533154 FAM19A1Q7Z5A9 133 aa3.6□□□□□ -1.83
C11orf54-212ENST00000533154 PRR15Q8IV56 129 aa3.6□□□□□ -1.83
C11orf54-212ENST00000533154 LINC00167Q96N53 147 aa3.6□□□□□ -1.83
C11orf54-212ENST00000533154 IGHV3OR16-8A0A075B7F1 116 aa3.59□□□□□ -1.83
C11orf54-212ENST00000533154 IGHV3-66A0A0C4DH42 116 aa3.59□□□□□ -1.83
C11orf54-212ENST00000533154 PLAC8L1A1L4L8 177 aa3.59□□□□□ -1.83
C11orf54-212ENST00000533154 IBA57-AS1B1ANH7 110 aa3.59□□□□□ -1.83
C11orf54-212ENST00000533154 F8WEM9 126 aa3.59□□□□□ -1.83
C11orf54-212ENST00000533154 PRB2P02812 416 aaPredicted RBP3.59□□□□□ -1.83
C11orf54-212ENST00000533154 RBM3P98179 157 aaKnown RBP3.59□□□□□ -1.83
C11orf54-212ENST00000533154 C9orf129Q5T035 196 aaKnown RBP3.59□□□□□ -1.83
C11orf54-212ENST00000533154 Q6ZRU5 148 aa3.59□□□□□ -1.83
C11orf54-212ENST00000533154 LINC01006Q8NI28 216 aa3.59□□□□□ -1.83
C11orf54-212ENST00000533154 ZNF625Q96I27 306 aaPredicted RBP3.59□□□□□ -1.83
C11orf54-212ENST00000533154 COL7A1Q02388 2944 aa3.58□□□□□ -1.84
C11orf54-212ENST00000533154 A0A0U1RQV1 116 aa3.58□□□□□ -1.84
C11orf54-212ENST00000533154 F6UB75 175 aa3.58□□□□□ -1.84
C11orf54-212ENST00000533154 KRTAP4-16G5E9R7 235 aaPredicted RBP3.58□□□□□ -1.84
C11orf54-212ENST00000533154 ERC2-IT1O76042 136 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms