RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 COX6A2Q02221 97 aa3.63□□□□□ -1.83
VPS11-204ENST00000530809 ATXN8Q156A1 80 aa3.63□□□□□ -1.83
VPS11-204ENST00000530809 Q1RN00 199 aa3.63□□□□□ -1.83
VPS11-204ENST00000530809 ARL17AQ8IVW1 177 aa3.63□□□□□ -1.83
VPS11-204ENST00000530809 LINC01600Q96MT4 127 aa3.63□□□□□ -1.83
VPS11-204ENST00000530809 NAA38Q9BRA0 125 aaKnown RBP3.63□□□□□ -1.83
VPS11-204ENST00000530809 LRP1BQ9NZR2 4599 aa3.62□□□□□ -1.83
VPS11-204ENST00000530809 IGLV4-60A0A075B6I1 120 aa3.62□□□□□ -1.83
VPS11-204ENST00000530809 TRAV13-2A0A0B4J235 113 aa3.62□□□□□ -1.83
VPS11-204ENST00000530809 PRSS2P07478 247 aa3.62□□□□□ -1.83
VPS11-204ENST00000530809 SCGB1C2P0DMR2 95 aa3.62□□□□□ -1.83
VPS11-204ENST00000530809 PSMB2P49721 201 aa3.62□□□□□ -1.83
VPS11-204ENST00000530809 COX17Q14061 63 aa3.62□□□□□ -1.83
VPS11-204ENST00000530809 CD164L2Q6UWJ8 174 aa3.62□□□□□ -1.83
VPS11-204ENST00000530809 LINC00308Q8TCZ7 52 aa3.62□□□□□ -1.83
VPS11-204ENST00000530809 NTN5Q8WTR8 489 aaPredicted RBP3.62□□□□□ -1.83
VPS11-204ENST00000530809 CARD19Q96LW7 228 aa3.62□□□□□ -1.83
VPS11-204ENST00000530809 SRRM2Q9UQ35 2752 aaKnown RBP3.62□□□□□ -1.83
VPS11-204ENST00000530809 TRAV8-4A0A0B4J246 113 aa3.61□□□□□ -1.83
VPS11-204ENST00000530809 TMEM262E9PQX1 116 aa3.61□□□□□ -1.83
VPS11-204ENST00000530809 H3BT86 120 aa3.61□□□□□ -1.83
VPS11-204ENST00000530809 COX7A2LO14548 114 aa3.61□□□□□ -1.83
VPS11-204ENST00000530809 OXTP01178 125 aa3.61□□□□□ -1.83
VPS11-204ENST00000530809 DNAH10OSP0CZ25 163 aa3.61□□□□□ -1.83
VPS11-204ENST00000530809 FUSP35637 526 aaKnown RBP eCLIP3.61□□□□□ -1.83
VPS11-204ENST00000530809 Q8N3U1 123 aa3.61□□□□□ -1.83
VPS11-204ENST00000530809 PRO0461Q9UI25 63 aa3.61□□□□□ -1.83
VPS11-204ENST00000530809 A0A096LPF7 62 aa3.6□□□□□ -1.83
VPS11-204ENST00000530809 IGLV5-52A0A0A0MRZ9 124 aa3.6□□□□□ -1.83
VPS11-204ENST00000530809 TCL1BO95988 128 aa3.6□□□□□ -1.83
VPS11-204ENST00000530809 CRPP02741 224 aa3.6□□□□□ -1.83
VPS11-204ENST00000530809 ANGP03950 147 aaKnown RBP3.6□□□□□ -1.83
VPS11-204ENST00000530809 RPL13AP40429 203 aaKnown RBP3.6□□□□□ -1.83
VPS11-204ENST00000530809 REG3AQ06141 175 aa3.6□□□□□ -1.83
VPS11-204ENST00000530809 ADAMTSL4-AS1Q5T5F5 129 aa3.6□□□□□ -1.83
VPS11-204ENST00000530809 CFAP161Q6P656 301 aa3.6□□□□□ -1.83
VPS11-204ENST00000530809 TEN1Q86WV5 123 aa3.6□□□□□ -1.83
VPS11-204ENST00000530809 VPS25Q9BRG1 176 aa3.6□□□□□ -1.83
VPS11-204ENST00000530809 PRR34Q9NV39 138 aa3.6□□□□□ -1.83
VPS11-204ENST00000530809 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.6□□□□□ -1.83
VPS11-204ENST00000530809 TRBV10-2A0A0K0K1G8 114 aa3.59□□□□□ -1.83
VPS11-204ENST00000530809 F8WDY8 70 aa3.59□□□□□ -1.83
VPS11-204ENST00000530809 LST1O00453 97 aa3.59□□□□□ -1.83
VPS11-204ENST00000530809 TRIAP1O43715 76 aa3.59□□□□□ -1.83
VPS11-204ENST00000530809 NDUFC2O95298 119 aa3.59□□□□□ -1.83
VPS11-204ENST00000530809 CKS1BP61024 79 aa3.59□□□□□ -1.83
VPS11-204ENST00000530809 C6orf226Q5I0X4 101 aa3.59□□□□□ -1.83
VPS11-204ENST00000530809 PPDPFLQ8WWR9 84 aa3.59□□□□□ -1.83
VPS11-204ENST00000530809 TOMM7Q9P0U1 55 aa3.59□□□□□ -1.83
VPS11-204ENST00000530809 MYCBP2O75592 4640 aa3.59□□□□□ -1.83
VPS11-204ENST00000530809 DNAH5Q8TE73 4624 aa3.59□□□□□ -1.84
VPS11-204ENST00000530809 IGKV3OR2-268A0A0C4DH90 116 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 PSCAO43653 123 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 SLC25A20O43772 301 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 MALP21145 153 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 XCL1P47992 114 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 LINC00158P58513 81 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 HAMPP81172 84 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 ETDBQ3ZM63 59 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 LINC01620Q4KN68 170 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 LINC00269Q8N2A0 174 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 MIR7-3HGQ8N6C7 128 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 ANKRD29Q8N6D5 301 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 CHCHD10Q8WYQ3 142 aaPredicted RBP3.58□□□□□ -1.84
VPS11-204ENST00000530809 SND1-IT1Q9HBX3 110 aa3.58□□□□□ -1.84
VPS11-204ENST00000530809 GVQW2A0A096LPI5 108 aaPredicted RBP3.57□□□□□ -1.84
VPS11-204ENST00000530809 A0A1B0GX51 115 aa3.57□□□□□ -1.84
VPS11-204ENST00000530809 C9JAW5 83 aa3.57□□□□□ -1.84
VPS11-204ENST00000530809 H0YGX0 51 aa3.57□□□□□ -1.84
VPS11-204ENST00000530809 TRACP01848 142 aa3.57□□□□□ -1.84
VPS11-204ENST00000530809 RPL28P46779 137 aaKnown RBP3.57□□□□□ -1.84
VPS11-204ENST00000530809 FOXI1Q12951 378 aa3.57□□□□□ -1.84
VPS11-204ENST00000530809 WFDC2Q14508 124 aa3.57□□□□□ -1.84
VPS11-204ENST00000530809 LINC01556Q5JQF7 62 aa3.57□□□□□ -1.84
VPS11-204ENST00000530809 Q6ZSA8 131 aa3.57□□□□□ -1.84
VPS11-204ENST00000530809 C5orf38Q86SI9 138 aa3.57□□□□□ -1.84
VPS11-204ENST00000530809 VPS13BQ7Z7G8 4022 aa3.57□□□□□ -1.84
VPS11-204ENST00000530809 LRCOL1A6NCL2 159 aa3.56□□□□□ -1.84
VPS11-204ENST00000530809 H7C2G1 150 aa3.56□□□□□ -1.84
VPS11-204ENST00000530809 NPC2P61916 151 aa3.56□□□□□ -1.84
VPS11-204ENST00000530809 SPAG11BQ08648 103 aa3.56□□□□□ -1.84
VPS11-204ENST00000530809 RNF151Q2KHN1 245 aa3.56□□□□□ -1.84
VPS11-204ENST00000530809 LYPD5Q6UWN5 251 aa3.56□□□□□ -1.84
VPS11-204ENST00000530809 SOSTDC1Q6X4U4 206 aa3.56□□□□□ -1.84
VPS11-204ENST00000530809 Q8N814 137 aa3.56□□□□□ -1.84
VPS11-204ENST00000530809 DAND5Q8N907 189 aa3.56□□□□□ -1.84
VPS11-204ENST00000530809 FAM30AQ9NZY2 134 aa3.56□□□□□ -1.84
VPS11-204ENST00000530809 UBR4Q5T4S7 5183 aa3.55□□□□□ -1.84
VPS11-204ENST00000530809 FAM240AA0A1B0GVK7 77 aa3.55□□□□□ -1.84
VPS11-204ENST00000530809 SNCGO76070 127 aa3.55□□□□□ -1.84
VPS11-204ENST00000530809 DNAL4O96015 105 aa3.55□□□□□ -1.84
VPS11-204ENST00000530809 SCGB1A1P11684 91 aa3.55□□□□□ -1.84
VPS11-204ENST00000530809 KIAA0087Q14695 138 aa3.55□□□□□ -1.84
VPS11-204ENST00000530809 CLPSL2Q6UWE3 100 aa3.55□□□□□ -1.84
VPS11-204ENST00000530809 UBE2WQ96B02 151 aa3.55□□□□□ -1.84
VPS11-204ENST00000530809 A0A0U1RRA0 63 aa3.54□□□□□ -1.84
VPS11-204ENST00000530809 GAGE12HA6NDE8 117 aa3.54□□□□□ -1.84
VPS11-204ENST00000530809 H3BQ85 93 aa3.54□□□□□ -1.84
VPS11-204ENST00000530809 C2orf82Q6UX34 121 aa3.54□□□□□ -1.84
VPS11-204ENST00000530809 WFDC10BQ8IUB3 73 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms