RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SRP19P09132 144 aaKnown RBP3.84□□□□□ -1.79
CSDE1-213ENST00000530784 ADCYAP1P18509 176 aa3.84□□□□□ -1.79
CSDE1-213ENST00000530784 SMIM7Q9BQ49 75 aa3.84□□□□□ -1.79
CSDE1-213ENST00000530784 TIMM21Q9BVV7 248 aa3.84□□□□□ -1.79
CSDE1-213ENST00000530784 OSTCQ9NRP0 149 aa3.84□□□□□ -1.79
CSDE1-213ENST00000530784 MRPL35Q9NZE8 188 aaKnown RBP3.84□□□□□ -1.79
CSDE1-213ENST00000530784 ZNF727A8MUV8 499 aa3.83□□□□□ -1.8
CSDE1-213ENST00000530784 NDUFA1O15239 70 aa3.83□□□□□ -1.8
CSDE1-213ENST00000530784 TCAPO15273 167 aa3.83□□□□□ -1.8
CSDE1-213ENST00000530784 COA6Q5JTJ3 125 aaKnown RBP3.83□□□□□ -1.8
CSDE1-213ENST00000530784 FAM19A5Q7Z5A7 132 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-213ENST00000530784 ORAOV1Q8WV07 137 aa3.83□□□□□ -1.8
CSDE1-213ENST00000530784 IMMP2LQ96T52 175 aa3.83□□□□□ -1.8
CSDE1-213ENST00000530784 EIF5A2Q9GZV4 153 aaKnown RBP3.83□□□□□ -1.8
CSDE1-213ENST00000530784 NAT8BQ9UHF3 227 aa3.83□□□□□ -1.8
CSDE1-213ENST00000530784 IGLV1-50A0A075B6I6 118 aa3.82□□□□□ -1.8
CSDE1-213ENST00000530784 UBE2D1P51668 147 aa3.82□□□□□ -1.8
CSDE1-213ENST00000530784 HBBP68871 147 aa3.82□□□□□ -1.8
CSDE1-213ENST00000530784 MRPL51Q4U2R6 128 aaKnown RBP3.82□□□□□ -1.8
CSDE1-213ENST00000530784 C20orf78Q9BR46 151 aa3.82□□□□□ -1.8
CSDE1-213ENST00000530784 SPANXA1Q9NS26 97 aa3.82□□□□□ -1.8
CSDE1-213ENST00000530784 V9GYV3 84 aa3.82□□□□□ -1.8
CSDE1-213ENST00000530784 IGHV3OR16-9A0A0B4J2B5 98 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 F8W036 122 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 M0QXV9 152 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 TLX1NBP0CAT3 122 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 CKS2P33552 79 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 RPL39P62891 51 aaKnown RBP3.81□□□□□ -1.8
CSDE1-213ENST00000530784 UBE2BP63146 152 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 MRPS36P82909 103 aaKnown RBP3.81□□□□□ -1.8
CSDE1-213ENST00000530784 TMEM241Q24JQ0 296 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 FAM104BQ5XKR9 115 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 UNQ6190/PRO20217Q6UXQ8 127 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 SVBPQ8N300 66 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 SMIM2Q9BVW6 85 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 C6orf48Q9UBA6 75 aa3.81□□□□□ -1.8
CSDE1-213ENST00000530784 TRBV24-1A0A075B6N3 115 aa3.8□□□□□ -1.8
CSDE1-213ENST00000530784 TGIF2-C20orf24A0A0A6YYL0 155 aa3.8□□□□□ -1.8
CSDE1-213ENST00000530784 A0A1B0GW15 77 aa3.8□□□□□ -1.8
CSDE1-213ENST00000530784 APOC3P02656 99 aa3.8□□□□□ -1.8
CSDE1-213ENST00000530784 ADIRFQ15847 76 aa3.8□□□□□ -1.8
CSDE1-213ENST00000530784 TRBV30A0A0K0K1B3 111 aa3.79□□□□□ -1.8
CSDE1-213ENST00000530784 SMIM27A0A1W2PRY6 76 aa3.79□□□□□ -1.8
CSDE1-213ENST00000530784 D6R8Y8 96 aa3.79□□□□□ -1.8
CSDE1-213ENST00000530784 S100A8P05109 93 aa3.79□□□□□ -1.8
CSDE1-213ENST00000530784 IFI27P40305 119 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-213ENST00000530784 RPL23P62829 140 aaKnown RBP3.79□□□□□ -1.8
CSDE1-213ENST00000530784 RHEBQ15382 184 aa3.79□□□□□ -1.8
CSDE1-213ENST00000530784 PCP2Q8IVA1 136 aa3.79□□□□□ -1.8
CSDE1-213ENST00000530784 PACRGQ96M98 296 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-213ENST00000530784 NAT8Q9UHE5 227 aa3.79□□□□□ -1.8
CSDE1-213ENST00000530784 A0A0U1RQV1 116 aa3.78□□□□□ -1.8
CSDE1-213ENST00000530784 NDUFC2-KCTD14E9PQ53 114 aa3.78□□□□□ -1.8
CSDE1-213ENST00000530784 NPYP01303 97 aa3.78□□□□□ -1.8
CSDE1-213ENST00000530784 PPBPP02775 128 aa3.78□□□□□ -1.8
CSDE1-213ENST00000530784 RAB5AP20339 215 aa3.78□□□□□ -1.8
CSDE1-213ENST00000530784 CXCL5P42830 114 aa3.78□□□□□ -1.8
CSDE1-213ENST00000530784 MRPL54Q6P161 138 aaKnown RBP3.78□□□□□ -1.8
CSDE1-213ENST00000530784 LPAP08519 4548 aa3.78□□□□□ -1.8
CSDE1-213ENST00000530784 DEFB116Q30KQ4 102 aa3.77□□□□□ -1.81
CSDE1-213ENST00000530784 C2orf82Q6UX34 121 aa3.77□□□□□ -1.81
CSDE1-213ENST00000530784 TEX43Q6ZNM6 134 aa3.77□□□□□ -1.81
CSDE1-213ENST00000530784 TMEM141Q96I45 108 aa3.77□□□□□ -1.81
CSDE1-213ENST00000530784 A0A1B0GXF2 115 aa3.76□□□□□ -1.81
CSDE1-213ENST00000530784 ORMDL3Q8N138 153 aa3.76□□□□□ -1.81
CSDE1-213ENST00000530784 C2orf88Q9BSF0 95 aa3.76□□□□□ -1.81
CSDE1-213ENST00000530784 TOMM7Q9P0U1 55 aa3.76□□□□□ -1.81
CSDE1-213ENST00000530784 MUC2Q02817 5179 aa3.76□□□□□ -1.81
CSDE1-213ENST00000530784 NUPR1O60356 82 aa3.75□□□□□ -1.81
CSDE1-213ENST00000530784 SCO1O75880 301 aa3.75□□□□□ -1.81
CSDE1-213ENST00000530784 UBE2AP49459 152 aa3.75□□□□□ -1.81
CSDE1-213ENST00000530784 CKS1BP61024 79 aa3.75□□□□□ -1.81
CSDE1-213ENST00000530784 TMEM136Q6ZRR5 245 aa3.75□□□□□ -1.81
CSDE1-213ENST00000530784 PRELID3AQ96N28 172 aa3.75□□□□□ -1.81
CSDE1-213ENST00000530784 YPEL4Q96NS1 127 aa3.75□□□□□ -1.81
CSDE1-213ENST00000530784 VCX2Q9H322 139 aa3.75□□□□□ -1.81
CSDE1-213ENST00000530784 SMCO4Q9NRQ5 59 aa3.75□□□□□ -1.81
CSDE1-213ENST00000530784 CYSLTR1Q9Y271 337 aa3.75□□□□□ -1.81
CSDE1-213ENST00000530784 TSPAN13O95857 204 aa3.74□□□□□ -1.81
CSDE1-213ENST00000530784 MT-ND4LP03901 98 aa3.74□□□□□ -1.81
CSDE1-213ENST00000530784 C6orf226Q5I0X4 101 aa3.74□□□□□ -1.81
CSDE1-213ENST00000530784 ATP5L2Q7Z4Y8 100 aa3.74□□□□□ -1.81
CSDE1-213ENST00000530784 Q8IZM0 81 aa3.74□□□□□ -1.81
CSDE1-213ENST00000530784 LINC00469Q8N7U9 141 aa3.74□□□□□ -1.81
CSDE1-213ENST00000530784 MAP1LC3AQ9H492 121 aa3.74□□□□□ -1.81
CSDE1-213ENST00000530784 XAGE1AQ9HD64 81 aa3.74□□□□□ -1.81
CSDE1-213ENST00000530784 LAMTOR2Q9Y2Q5 125 aa3.74□□□□□ -1.81
CSDE1-213ENST00000530784 C22orf24Q9Y442 160 aa3.74□□□□□ -1.81
CSDE1-213ENST00000530784 TRAV9-1A0A075B6T8 112 aa3.73□□□□□ -1.81
CSDE1-213ENST00000530784 LOC389332A0A1B0GUA5 103 aa3.73□□□□□ -1.81
CSDE1-213ENST00000530784 COLCA2A8K830 154 aa3.73□□□□□ -1.81
CSDE1-213ENST00000530784 F8VRH5 84 aa3.73□□□□□ -1.81
CSDE1-213ENST00000530784 BCE1O60756 84 aa3.73□□□□□ -1.81
CSDE1-213ENST00000530784 RPL28P46779 137 aaKnown RBP3.73□□□□□ -1.81
CSDE1-213ENST00000530784 LINC00173Q6ZV60 143 aa3.73□□□□□ -1.81
CSDE1-213ENST00000530784 MRPL55Q7Z7F7 128 aaKnown RBP3.73□□□□□ -1.81
CSDE1-213ENST00000530784 CBLN2Q8IUK8 224 aa3.73□□□□□ -1.81
CSDE1-213ENST00000530784 AMELXQ99217 191 aa3.73□□□□□ -1.81
CSDE1-213ENST00000530784 CRYGAP11844 174 aa3.72□□□□□ -1.81
CSDE1-213ENST00000530784 HERVK_113P63121 156 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 617.5 ms