RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 SERP2Q8N6R1 65 aa2.54□□□□□ -2
USP47-209ENST00000530041 RMI2Q96E14 147 aa2.54□□□□□ -2
USP47-209ENST00000530041 SPTBN2O15020 2390 aa2.54□□□□□ -2
USP47-209ENST00000530041 PRUNE2Q8WUY3 3088 aa2.54□□□□□ -2
USP47-209ENST00000530041 NBEAQ8NFP9 2946 aa2.54□□□□□ -2
USP47-209ENST00000530041 FREM2Q5SZK8 3169 aa2.53□□□□□ -2
USP47-209ENST00000530041 TRBV10-3A0A0K0K1G6 114 aa2.53□□□□□ -2
USP47-209ENST00000530041 LOC107984640A0A0U1RRK4 108 aa2.53□□□□□ -2
USP47-209ENST00000530041 hADV29S1A0JD25 119 aa2.53□□□□□ -2
USP47-209ENST00000530041 A6NED7 52 aa2.53□□□□□ -2
USP47-209ENST00000530041 A8MWP4 228 aa2.53□□□□□ -2
USP47-209ENST00000530041 IBA57-AS1B1ANH7 110 aa2.53□□□□□ -2
USP47-209ENST00000530041 B4DSR2 109 aa2.53□□□□□ -2
USP47-209ENST00000530041 C19orf84I3L1E1 186 aa2.53□□□□□ -2
USP47-209ENST00000530041 BCE1O60756 84 aa2.53□□□□□ -2
USP47-209ENST00000530041 PRM2P04554 102 aa2.53□□□□□ -2
USP47-209ENST00000530041 CCL18P55774 89 aa2.53□□□□□ -2
USP47-209ENST00000530041 SS18Q15532 418 aa2.53□□□□□ -2
USP47-209ENST00000530041 DEFB112Q30KQ8 113 aa2.53□□□□□ -2
USP47-209ENST00000530041 SMIM11BQ8TCY0 68 aa2.53□□□□□ -2
USP47-209ENST00000530041 COX7B2Q8TF08 81 aa2.53□□□□□ -2
USP47-209ENST00000530041 DPH3Q96FX2 82 aa2.53□□□□□ -2
USP47-209ENST00000530041 LINC00846Q9NV44 126 aa2.53□□□□□ -2
USP47-209ENST00000530041 MAP1BP46821 2468 aaKnown RBP2.53□□□□□ -2
USP47-209ENST00000530041 EP300Q09472 2414 aaPredicted RBP2.53□□□□□ -2
USP47-209ENST00000530041 ABCA2Q9BZC7 2435 aa2.53□□□□□ -2
USP47-209ENST00000530041 EYSQ5T1H1 3165 aa2.53□□□□□ -2.01
USP47-209ENST00000530041 VPS13AQ96RL7 3174 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 TRAV13-1A0A0B4J241 112 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 TRBV6-4A0A1B0GX49 114 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 A8MUN3 132 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 DNAL4O96015 105 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 CCKP06307 115 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 DEFB114Q30KQ6 69 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 S100A7L2Q5SY68 101 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 ATP5EP2Q5VTU8 51 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 ADM2Q7Z4H4 148 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 SPANXA2-OT1Q8N9U9 137 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 CYSTM1Q9H1C7 97 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 C14orf132Q9NPU4 83 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 PTPRQQ9UMZ3 2332 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 COL6A6A6NMZ7 2263 aa2.52□□□□□ -2.01
USP47-209ENST00000530041 MYO15AQ9UKN7 3530 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 ZZEF1O43149 2961 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 DSPP15924 2871 aaKnown RBP2.51□□□□□ -2.01
USP47-209ENST00000530041 A0A096LNT2 108 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 IGKV3D-7A0A0C4DH55 119 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 JMJD7-PLA2G4BH0Y9G9 81 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 LECT2O14960 151 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 NDUFC2O95298 119 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 HTN1P15515 57 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 SCXQ7RTU7 201 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 C4orf3Q8WVX3 66 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 CCL19Q99731 98 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 CELSR3Q9NYQ7 3312 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 COL6A3P12111 3177 aa2.51□□□□□ -2.01
USP47-209ENST00000530041 SPTBN1Q01082 2364 aaKnown RBP2.5□□□□□ -2.01
USP47-209ENST00000530041 TRGV1A0A0A0MS02 117 aa2.5□□□□□ -2.01
USP47-209ENST00000530041 NCR3O14931 201 aa2.5□□□□□ -2.01
USP47-209ENST00000530041 LINC00158P58513 81 aa2.5□□□□□ -2.01
USP47-209ENST00000530041 Q5XG85 94 aa2.5□□□□□ -2.01
USP47-209ENST00000530041 Q6ZTI0 123 aa2.5□□□□□ -2.01
USP47-209ENST00000530041 ORMDL1Q9P0S3 153 aa2.5□□□□□ -2.01
USP47-209ENST00000530041 LINC00588Q9Y4M8 146 aa2.5□□□□□ -2.01
USP47-209ENST00000530041 PTPRZ1P23471 2315 aaPredicted RBP2.5□□□□□ -2.01
USP47-209ENST00000530041 SORL1Q92673 2214 aa2.49□□□□□ -2.01
USP47-209ENST00000530041 A0A087WVE0 104 aa2.49□□□□□ -2.01
USP47-209ENST00000530041 TRBV6-8A0A0A6YYG3 113 aa2.49□□□□□ -2.01
USP47-209ENST00000530041 LINC00959A0A1B0GUT2 108 aa2.49□□□□□ -2.01
USP47-209ENST00000530041 TMEM256-PLSCR3K7ERE1 68 aa2.49□□□□□ -2.01
USP47-209ENST00000530041 UBE2L6O14933 153 aa2.49□□□□□ -2.01
USP47-209ENST00000530041 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
USP47-209ENST00000530041 Q8IZM0 81 aa2.49□□□□□ -2.01
USP47-209ENST00000530041 Q8N814 137 aa2.49□□□□□ -2.01
USP47-209ENST00000530041 DYNLRB2Q8TF09 96 aa2.49□□□□□ -2.01
USP47-209ENST00000530041 C11orf68Q9H3H3 251 aaKnown RBP2.49□□□□□ -2.01
USP47-209ENST00000530041 TRAV7A0A075B6U4 112 aa2.48□□□□□ -2.01
USP47-209ENST00000530041 LOC110117498A0A087WWA1 95 aa2.48□□□□□ -2.01
USP47-209ENST00000530041 H3BQ85 93 aa2.48□□□□□ -2.01
USP47-209ENST00000530041 DEFB136Q30KP8 78 aa2.48□□□□□ -2.01
USP47-209ENST00000530041 DSCR8Q96T75 97 aa2.48□□□□□ -2.01
USP47-209ENST00000530041 NOP10Q9NPE3 64 aaKnown RBP2.48□□□□□ -2.01
USP47-209ENST00000530041 TOMM7Q9P0U1 55 aa2.48□□□□□ -2.01
USP47-209ENST00000530041 A8MUU9 505 aa2.47□□□□□ -2.01
USP47-209ENST00000530041 IGLV7-43P04211 117 aa2.47□□□□□ -2.01
USP47-209ENST00000530041 XCL1P47992 114 aa2.47□□□□□ -2.01
USP47-209ENST00000530041 COX17Q14061 63 aa2.47□□□□□ -2.01
USP47-209ENST00000530041 LINC00483Q53H64 154 aa2.47□□□□□ -2.01
USP47-209ENST00000530041 LINC00575Q6W349 94 aa2.47□□□□□ -2.01
USP47-209ENST00000530041 Q6ZQT0 140 aa2.47□□□□□ -2.01
USP47-209ENST00000530041 ST20-AS1Q8NBB2 130 aa2.47□□□□□ -2.01
USP47-209ENST00000530041 MUC7Q8TAX7 377 aa2.47□□□□□ -2.01
USP47-209ENST00000530041 UBL5Q9BZL1 73 aa2.47□□□□□ -2.01
USP47-209ENST00000530041 SERP1Q9Y6X1 66 aa2.47□□□□□ -2.01
USP47-209ENST00000530041 TLN1Q9Y490 2541 aaKnown RBP2.47□□□□□ -2.01
USP47-209ENST00000530041 CFAP47Q6ZTR5 3102 aa2.46□□□□□ -2.01
USP47-209ENST00000530041 TNRC18O15417 2968 aaPredicted RBP2.46□□□□□ -2.01
USP47-209ENST00000530041 SPTAN1Q13813 2472 aaKnown RBP2.46□□□□□ -2.02
USP47-209ENST00000530041 HIVEP3Q5T1R4 2406 aa2.46□□□□□ -2.02
USP47-209ENST00000530041 GVINP1Q7Z2Y8 2422 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms