RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 COX6A2Q02221 97 aa6.97□□□□□ -1.29
USP35-201ENST00000526425 ANGP03950 147 aaKnown RBP6.96□□□□□ -1.3
USP35-201ENST00000526425 VWFP04275 2813 aa6.96□□□□□ -1.3
USP35-201ENST00000526425 OTOGQ6ZRI0 2925 aa6.96□□□□□ -1.3
USP35-201ENST00000526425 CRPP02741 224 aa6.96□□□□□ -1.3
USP35-201ENST00000526425 TRAV10A0A0B4J240 114 aa6.95□□□□□ -1.3
USP35-201ENST00000526425 SPATA3Q8NHX4 192 aa6.95□□□□□ -1.3
USP35-201ENST00000526425 OXLD1Q5BKU9 147 aa6.95□□□□□ -1.3
USP35-201ENST00000526425 TENM1Q9UKZ4 2725 aa6.94□□□□□ -1.3
USP35-201ENST00000526425 A0A087WYN8 130 aa6.94□□□□□ -1.3
USP35-201ENST00000526425 TRBV10-1A0A0K0K1A3 114 aa6.94□□□□□ -1.3
USP35-201ENST00000526425 MIR7-3HGQ8N6C7 128 aa6.94□□□□□ -1.3
USP35-201ENST00000526425 KRTAP10-3P60369 221 aa6.93□□□□□ -1.3
USP35-201ENST00000526425 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
USP35-201ENST00000526425 BEAN1Q3B7T3 259 aa6.93□□□□□ -1.3
USP35-201ENST00000526425 NTM-AS1Q6ZSK4 140 aa6.93□□□□□ -1.3
USP35-201ENST00000526425 LINC00308Q8TCZ7 52 aa6.93□□□□□ -1.3
USP35-201ENST00000526425 MIFP14174 115 aa6.93□□□□□ -1.3
USP35-201ENST00000526425 APOC4P55056 127 aa6.93□□□□□ -1.3
USP35-201ENST00000526425 IGLV4-60A0A075B6I1 120 aa6.92□□□□□ -1.3
USP35-201ENST00000526425 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
USP35-201ENST00000526425 LINC00242Q5T6M2 205 aa6.92□□□□□ -1.3
USP35-201ENST00000526425 FUSP35637 526 aaKnown RBP eCLIP6.92□□□□□ -1.3
USP35-201ENST00000526425 TRAV7A0A075B6U4 112 aa6.91□□□□□ -1.3
USP35-201ENST00000526425 C6orf223Q8N319 242 aa6.91□□□□□ -1.3
USP35-201ENST00000526425 LAMTOR3Q9UHA4 124 aa6.91□□□□□ -1.3
USP35-201ENST00000526425 TRBV6-8A0A0A6YYG3 113 aa6.9□□□□□ -1.3
USP35-201ENST00000526425 GIG44P09565 113 aaPredicted RBP6.9□□□□□ -1.3
USP35-201ENST00000526425 ESRGQ1W209 222 aa6.9□□□□□ -1.3
USP35-201ENST00000526425 TM2D3Q9BRN9 247 aa6.9□□□□□ -1.3
USP35-201ENST00000526425 PRO0255Q9UI72 69 aa6.9□□□□□ -1.3
USP35-201ENST00000526425 IGHV4-28A0A0C4DH34 117 aa6.9□□□□□ -1.31
USP35-201ENST00000526425 LINC00269Q8N2A0 174 aa6.89□□□□□ -1.31
USP35-201ENST00000526425 CDC42SE2Q9NRR3 84 aa6.89□□□□□ -1.31
USP35-201ENST00000526425 ZNF469Q96JG9 3925 aaPredicted RBP6.89□□□□□ -1.31
USP35-201ENST00000526425 PLAC8L1A1L4L8 177 aa6.89□□□□□ -1.31
USP35-201ENST00000526425 TRBV6-4A0A1B0GX49 114 aa6.89□□□□□ -1.31
USP35-201ENST00000526425 COX7B2Q8TF08 81 aa6.89□□□□□ -1.31
USP35-201ENST00000526425 LITAFQ99732 161 aa6.89□□□□□ -1.31
USP35-201ENST00000526425 A8MU10 97 aa6.88□□□□□ -1.31
USP35-201ENST00000526425 KLK12Q9UKR0 248 aa6.88□□□□□ -1.31
USP35-201ENST00000526425 KRTAP24-1Q3LI83 254 aa6.88□□□□□ -1.31
USP35-201ENST00000526425 Q8N3U1 123 aa6.87□□□□□ -1.31
USP35-201ENST00000526425 ORMDL1Q9P0S3 153 aa6.87□□□□□ -1.31
USP35-201ENST00000526425 A8MTW9 85 aa6.87□□□□□ -1.31
USP35-201ENST00000526425 SPART-AS1P0CW21 52 aa6.87□□□□□ -1.31
USP35-201ENST00000526425 SMIM1B2RUZ4 78 aa6.87□□□□□ -1.31
USP35-201ENST00000526425 IGHV4-30-4P0DP06 118 aa6.87□□□□□ -1.31
USP35-201ENST00000526425 TMEM256-PLSCR3K7ERE1 68 aa6.86□□□□□ -1.31
USP35-201ENST00000526425 C19orf73Q9NVV2 129 aa6.86□□□□□ -1.31
USP35-201ENST00000526425 TRAV13-2A0A0B4J235 113 aa6.86□□□□□ -1.31
USP35-201ENST00000526425 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
USP35-201ENST00000526425 CHKB-CPT1BH3BT56 60 aa6.86□□□□□ -1.31
USP35-201ENST00000526425 MDFIQ99750 246 aa6.85□□□□□ -1.31
USP35-201ENST00000526425 SMIM11BQ8TCY0 68 aa6.85□□□□□ -1.31
USP35-201ENST00000526425 CELA1Q9UNI1 258 aa6.85□□□□□ -1.31
USP35-201ENST00000526425 NDUFA1O15239 70 aa6.84□□□□□ -1.31
USP35-201ENST00000526425 Q8N9L7 120 aa6.84□□□□□ -1.31
USP35-201ENST00000526425 TMEM254Q8TBM7 123 aa6.84□□□□□ -1.31
USP35-201ENST00000526425 A8MUN3 132 aa6.84□□□□□ -1.32
USP35-201ENST00000526425 LINC00959A0A1B0GUT2 108 aa6.83□□□□□ -1.32
USP35-201ENST00000526425 LINC01600Q96MT4 127 aa6.83□□□□□ -1.32
USP35-201ENST00000526425 CSNK1G2-AS1Q8NCQ2 148 aa6.83□□□□□ -1.32
USP35-201ENST00000526425 C22orf24Q9Y442 160 aa6.83□□□□□ -1.32
USP35-201ENST00000526425 X6R8D5 127 aa6.82□□□□□ -1.32
USP35-201ENST00000526425 NREPQ16612 68 aa6.82□□□□□ -1.32
USP35-201ENST00000526425 PRR15Q8IV56 129 aa6.82□□□□□ -1.32
USP35-201ENST00000526425 REG3AQ06141 175 aa6.82□□□□□ -1.32
USP35-201ENST00000526425 C9orf116Q5BN46 136 aaPredicted RBP6.82□□□□□ -1.32
USP35-201ENST00000526425 FAM104AQ969W3 186 aa6.82□□□□□ -1.32
USP35-201ENST00000526425 OVOL2Q9BRP0 275 aa6.82□□□□□ -1.32
USP35-201ENST00000526425 HIGD2AQ9BW72 106 aa6.82□□□□□ -1.32
USP35-201ENST00000526425 FBN1P35555 2871 aaKnown RBP6.81□□□□□ -1.32
USP35-201ENST00000526425 CHCHD10Q8WYQ3 142 aaPredicted RBP6.81□□□□□ -1.32
USP35-201ENST00000526425 PRR3P79522 188 aaKnown RBP6.81□□□□□ -1.32
USP35-201ENST00000526425 KLKP1Q107X0 134 aa6.81□□□□□ -1.32
USP35-201ENST00000526425 LYRM9A8MSI8 78 aa6.8□□□□□ -1.32
USP35-201ENST00000526425 HIGD2BQ4VC39 106 aa6.8□□□□□ -1.32
USP35-201ENST00000526425 LINC00337Q8N6G1 96 aa6.8□□□□□ -1.32
USP35-201ENST00000526425 NDUFC1O43677 76 aa6.8□□□□□ -1.32
USP35-201ENST00000526425 IGKV2D-24A0A075B6R9 120 aa6.78□□□□□ -1.32
USP35-201ENST00000526425 LINC01547P58512 204 aaPredicted RBP6.78□□□□□ -1.32
USP35-201ENST00000526425 PRYO14603 147 aa6.78□□□□□ -1.32
USP35-201ENST00000526425 SPAG11BQ08648 103 aa6.78□□□□□ -1.32
USP35-201ENST00000526425 A6NED7 52 aa6.78□□□□□ -1.32
USP35-201ENST00000526425 BPY2O14599 106 aa6.78□□□□□ -1.32
USP35-201ENST00000526425 Q6ZRU5 148 aa6.78□□□□□ -1.32
USP35-201ENST00000526425 H0YGX0 51 aa6.77□□□□□ -1.33
USP35-201ENST00000526425 ATP5EP2Q5VTU8 51 aa6.77□□□□□ -1.33
USP35-201ENST00000526425 XAGE1AQ9HD64 81 aa6.77□□□□□ -1.33
USP35-201ENST00000526425 CCL18P55774 89 aa6.77□□□□□ -1.33
USP35-201ENST00000526425 Q6ZTC4 211 aa6.77□□□□□ -1.33
USP35-201ENST00000526425 ANK3Q12955 4377 aaKnown RBP6.76□□□□□ -1.33
USP35-201ENST00000526425 CYSRT1A8MQ03 144 aa6.76□□□□□ -1.33
USP35-201ENST00000526425 KTN1-AS1Q86SY8 53 aa6.76□□□□□ -1.33
USP35-201ENST00000526425 ATP5EP56381 51 aaPredicted RBP6.76□□□□□ -1.33
USP35-201ENST00000526425 IGLV5-39A0A0G2JS06 123 aa6.75□□□□□ -1.33
USP35-201ENST00000526425 JMJD7-PLA2G4BH0Y9G9 81 aa6.75□□□□□ -1.33
USP35-201ENST00000526425 KPRPQ5T749 579 aaPredicted RBP6.75□□□□□ -1.33
USP35-201ENST00000526425 FAM30AQ9NZY2 134 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms