RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PHF5AQ7RTV0 110 aaKnown RBP9.48□□□□□ -0.89
LRRK1-202ENST00000525284 Q8NBF4 154 aa9.48□□□□□ -0.89
LRRK1-202ENST00000525284 AVPP01185 164 aa9.48□□□□□ -0.89
LRRK1-202ENST00000525284 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
LRRK1-202ENST00000525284 IGLV6-57P01721 117 aa9.47□□□□□ -0.89
LRRK1-202ENST00000525284 ELOF1P60002 83 aaKnown RBP9.47□□□□□ -0.89
LRRK1-202ENST00000525284 LCA10Q71F78 164 aa9.46□□□□□ -0.89
LRRK1-202ENST00000525284 TRBV7-4A0A0J9YYF1 115 aa9.46□□□□□ -0.9
LRRK1-202ENST00000525284 ATG2AQ2TAZ0 1938 aa9.45□□□□□ -0.9
LRRK1-202ENST00000525284 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
LRRK1-202ENST00000525284 C2CD3Q4AC94 2353 aa9.44□□□□□ -0.9
LRRK1-202ENST00000525284 PTPN13Q12923 2485 aa9.44□□□□□ -0.9
LRRK1-202ENST00000525284 LRP4O75096 1905 aa9.44□□□□□ -0.9
LRRK1-202ENST00000525284 LOC110117498A0A087WWA1 95 aa9.43□□□□□ -0.9
LRRK1-202ENST00000525284 IGLV5-39A0A0G2JS06 123 aa9.43□□□□□ -0.9
LRRK1-202ENST00000525284 A0A1B0GW54 56 aa9.43□□□□□ -0.9
LRRK1-202ENST00000525284 NHLRC4P0CG21 123 aaPredicted RBP9.43□□□□□ -0.9
LRRK1-202ENST00000525284 A0A0D9SG42 100 aa9.42□□□□□ -0.9
LRRK1-202ENST00000525284 EML5Q05BV3 1969 aa9.42□□□□□ -0.9
LRRK1-202ENST00000525284 Q6ZRX8 168 aa9.41□□□□□ -0.9
LRRK1-202ENST00000525284 K7EQZ3 153 aa9.41□□□□□ -0.9
LRRK1-202ENST00000525284 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.9
LRRK1-202ENST00000525284 EXPH5Q8NEV8 1989 aa9.4□□□□□ -0.9
LRRK1-202ENST00000525284 MRPL34Q9BQ48 92 aaKnown RBP9.4□□□□□ -0.9
LRRK1-202ENST00000525284 CDC42SE1Q9NRR8 79 aa9.4□□□□□ -0.9
LRRK1-202ENST00000525284 C16orf90A8MZG2 172 aa9.4□□□□□ -0.91
LRRK1-202ENST00000525284 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
LRRK1-202ENST00000525284 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
LRRK1-202ENST00000525284 IGHV3OR16-9A0A0B4J2B5 98 aa9.39□□□□□ -0.91
LRRK1-202ENST00000525284 A8MWP4 228 aa9.38□□□□□ -0.91
LRRK1-202ENST00000525284 PRO0461Q9UI25 63 aa9.38□□□□□ -0.91
LRRK1-202ENST00000525284 PCNTO95613 3336 aa9.38□□□□□ -0.91
LRRK1-202ENST00000525284 CENPFP49454 3210 aa9.37□□□□□ -0.91
LRRK1-202ENST00000525284 ERC2-IT1O76042 136 aa9.37□□□□□ -0.91
LRRK1-202ENST00000525284 HIVEP3Q5T1R4 2406 aa9.37□□□□□ -0.91
LRRK1-202ENST00000525284 FHL3Q13643 280 aa9.36□□□□□ -0.91
LRRK1-202ENST00000525284 COX8CQ7Z4L0 72 aa9.36□□□□□ -0.91
LRRK1-202ENST00000525284 Q6ZRP5 223 aa9.35□□□□□ -0.91
LRRK1-202ENST00000525284 DSCR10P59022 87 aa9.34□□□□□ -0.91
LRRK1-202ENST00000525284 CPAMD8Q8IZJ3 1885 aa9.34□□□□□ -0.91
LRRK1-202ENST00000525284 RTL8CO15255 209 aa9.34□□□□□ -0.91
LRRK1-202ENST00000525284 TTC28Q96AY4 2481 aa9.32□□□□□ -0.92
LRRK1-202ENST00000525284 C9orf92A6NGG3 77 aa9.32□□□□□ -0.92
LRRK1-202ENST00000525284 ZFHX2Q9C0A1 2572 aaPredicted RBP9.31□□□□□ -0.92
LRRK1-202ENST00000525284 KRTAP10-9P60411 292 aa9.3□□□□□ -0.92
LRRK1-202ENST00000525284 CDSNQ15517 529 aa9.3□□□□□ -0.92
LRRK1-202ENST00000525284 C16orf95Q9H693 158 aa9.3□□□□□ -0.92
LRRK1-202ENST00000525284 CSNK1G2-AS1Q8NCQ2 148 aa9.29□□□□□ -0.92
LRRK1-202ENST00000525284 WIPF1O43516 503 aa9.28□□□□□ -0.92
LRRK1-202ENST00000525284 LINC00315P59091 139 aa9.28□□□□□ -0.92
LRRK1-202ENST00000525284 PRO3102Q9H379 93 aa9.28□□□□□ -0.92
LRRK1-202ENST00000525284 CACNA1AO00555 2505 aa9.27□□□□□ -0.93
LRRK1-202ENST00000525284 OBSCN-AS1Q96MR7 158 aa9.27□□□□□ -0.93
LRRK1-202ENST00000525284 IGLV5-48A0A075B6I7 105 aa9.26□□□□□ -0.93
LRRK1-202ENST00000525284 ANKHD1Q8IWZ3 2542 aaKnown RBP9.26□□□□□ -0.93
LRRK1-202ENST00000525284 ZNF575Q86XF7 245 aa9.26□□□□□ -0.93
LRRK1-202ENST00000525284 LINC01546A6NGU7 62 aa9.26□□□□□ -0.93
LRRK1-202ENST00000525284 ABCA2Q9BZC7 2435 aa9.26□□□□□ -0.93
LRRK1-202ENST00000525284 MYO18BQ8IUG5 2567 aa9.25□□□□□ -0.93
LRRK1-202ENST00000525284 COL5A1P20908 1838 aaPredicted RBP9.25□□□□□ -0.93
LRRK1-202ENST00000525284 WDR87Q6ZQQ6 2873 aa9.25□□□□□ -0.93
LRRK1-202ENST00000525284 FAM168BA1KXE4 195 aa9.25□□□□□ -0.93
LRRK1-202ENST00000525284 IGLV5-37A0A075B6J1 123 aa9.24□□□□□ -0.93
LRRK1-202ENST00000525284 C8orf17Q9NRJ1 99 aa9.24□□□□□ -0.93
LRRK1-202ENST00000525284 CEP350Q5VT06 3117 aa9.24□□□□□ -0.93
LRRK1-202ENST00000525284 CCDC168Q8NDH2 2452 aa9.24□□□□□ -0.93
LRRK1-202ENST00000525284 ACACBO00763 2458 aa9.24□□□□□ -0.93
LRRK1-202ENST00000525284 IGLV5-45A0A087WSX0 123 aa9.23□□□□□ -0.93
LRRK1-202ENST00000525284 H3BS24 57 aa9.23□□□□□ -0.93
LRRK1-202ENST00000525284 C10orf142B7Z368 130 aa9.22□□□□□ -0.93
LRRK1-202ENST00000525284 RAI1Q7Z5J4 1906 aaPredicted RBP9.21□□□□□ -0.94
LRRK1-202ENST00000525284 TET2Q6N021 2002 aaPredicted RBP9.19□□□□□ -0.94
LRRK1-202ENST00000525284 PRR15Q8IV56 129 aa9.19□□□□□ -0.94
LRRK1-202ENST00000525284 FAM104AQ969W3 186 aa9.19□□□□□ -0.94
LRRK1-202ENST00000525284 IGFL1Q6UW32 110 aa9.18□□□□□ -0.94
LRRK1-202ENST00000525284 KLKP1Q107X0 134 aa9.18□□□□□ -0.94
LRRK1-202ENST00000525284 Q1T7F1 81 aa9.18□□□□□ -0.94
LRRK1-202ENST00000525284 LINC00483Q53H64 154 aa9.18□□□□□ -0.94
LRRK1-202ENST00000525284 NBDYA0A0U1RRE5 68 aa9.17□□□□□ -0.94
LRRK1-202ENST00000525284 Q8N1X5 172 aa9.17□□□□□ -0.94
LRRK1-202ENST00000525284 A0A1B0GVX0 72 aa9.17□□□□□ -0.94
LRRK1-202ENST00000525284 ZNF462Q96JM2 2506 aa9.16□□□□□ -0.94
LRRK1-202ENST00000525284 A0A0G2JQZ4 141 aa9.16□□□□□ -0.94
LRRK1-202ENST00000525284 A0A1W2PNN7 141 aa9.16□□□□□ -0.94
LRRK1-202ENST00000525284 MUC6Q6W4X9 2439 aa9.15□□□□□ -0.94
LRRK1-202ENST00000525284 H7BZZ5 65 aa9.15□□□□□ -0.94
LRRK1-202ENST00000525284 BPTFQ12830 3046 aa9.15□□□□□ -0.94
LRRK1-202ENST00000525284 SMR3BP02814 79 aaPredicted RBP9.14□□□□□ -0.95
LRRK1-202ENST00000525284 A0A0A0MQY5 61 aa9.14□□□□□ -0.95
LRRK1-202ENST00000525284 RBM12B-AS1Q9P1G2 102 aa9.14□□□□□ -0.95
LRRK1-202ENST00000525284 F8P00451 2351 aa9.14□□□□□ -0.95
LRRK1-202ENST00000525284 GVQW2A0A096LPI5 108 aaPredicted RBP9.13□□□□□ -0.95
LRRK1-202ENST00000525284 LINC00304Q8N9R0 145 aa9.13□□□□□ -0.95
LRRK1-202ENST00000525284 LINC00588Q9Y4M8 146 aa9.13□□□□□ -0.95
LRRK1-202ENST00000525284 BDP1A6H8Y1 2624 aa9.12□□□□□ -0.95
LRRK1-202ENST00000525284 IGLV1-50A0A075B6I6 118 aa9.11□□□□□ -0.95
LRRK1-202ENST00000525284 M0R2T5 61 aa9.11□□□□□ -0.95
LRRK1-202ENST00000525284 H3BNG1 76 aa9.1□□□□□ -0.95
LRRK1-202ENST00000525284 CAMK2N1Q7Z7J9 78 aa9.1□□□□□ -0.95
LRRK1-202ENST00000525284 CUL9Q8IWT3 2517 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms