RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TMEM14DPA8MWL7 114 aa2.52□□□□□ -2.01
CD44-213ENST00000525209 DNAJC13O75165 2243 aa2.52□□□□□ -2.01
CD44-213ENST00000525209 TRBV6-8A0A0A6YYG3 113 aa2.51□□□□□ -2.01
CD44-213ENST00000525209 IGHV3-30P01768 117 aa2.51□□□□□ -2.01
CD44-213ENST00000525209 STATHP02808 62 aa2.51□□□□□ -2.01
CD44-213ENST00000525209 IGHV3-30-5P0DP03 117 aa2.51□□□□□ -2.01
CD44-213ENST00000525209 SPINT3P49223 89 aa2.51□□□□□ -2.01
CD44-213ENST00000525209 ELOF1P60002 83 aaKnown RBP2.51□□□□□ -2.01
CD44-213ENST00000525209 ZNF56Q15929 161 aa2.51□□□□□ -2.01
CD44-213ENST00000525209 SPINK14Q6IE38 97 aa2.51□□□□□ -2.01
CD44-213ENST00000525209 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
CD44-213ENST00000525209 SFTA2Q6UW10 78 aa2.51□□□□□ -2.01
CD44-213ENST00000525209 SPACA4Q8TDM5 124 aa2.51□□□□□ -2.01
CD44-213ENST00000525209 NDUFA4L2Q9NRX3 87 aa2.51□□□□□ -2.01
CD44-213ENST00000525209 APCP25054 2843 aa2.51□□□□□ -2.01
CD44-213ENST00000525209 NIPBLQ6KC79 2804 aaeCLIP2.5□□□□□ -2.01
CD44-213ENST00000525209 ANKHD1Q8IWZ3 2542 aaKnown RBP2.5□□□□□ -2.01
CD44-213ENST00000525209 HIVEP1P15822 2718 aa2.5□□□□□ -2.01
CD44-213ENST00000525209 ZFHX3Q15911 3703 aa2.5□□□□□ -2.01
CD44-213ENST00000525209 MAP1AP78559 2803 aaPredicted RBP2.5□□□□□ -2.01
CD44-213ENST00000525209 IGKV2D-24A0A075B6R9 120 aa2.5□□□□□ -2.01
CD44-213ENST00000525209 LOC101927531A0A1B0GV80 90 aa2.5□□□□□ -2.01
CD44-213ENST00000525209 UMAD1C9J7I0 102 aa2.5□□□□□ -2.01
CD44-213ENST00000525209 SMIM13P0DJ93 91 aa2.5□□□□□ -2.01
CD44-213ENST00000525209 XAF1Q6GPH4 301 aa2.5□□□□□ -2.01
CD44-213ENST00000525209 CCL19Q99731 98 aa2.5□□□□□ -2.01
CD44-213ENST00000525209 DYNLRB1Q9NP97 96 aa2.5□□□□□ -2.01
CD44-213ENST00000525209 LENEPQ9Y5L5 61 aa2.5□□□□□ -2.01
CD44-213ENST00000525209 SPENQ96T58 3664 aaKnown RBP2.49□□□□□ -2.01
CD44-213ENST00000525209 CR1P17927 2039 aa2.49□□□□□ -2.01
CD44-213ENST00000525209 ACANP16112 2415 aa2.49□□□□□ -2.01
CD44-213ENST00000525209 BSNQ9UPA5 3926 aa2.49□□□□□ -2.01
CD44-213ENST00000525209 TRBV6-7A0A0A0MS04 114 aa2.49□□□□□ -2.01
CD44-213ENST00000525209 HIGD1CA8MV81 97 aa2.49□□□□□ -2.01
CD44-213ENST00000525209 HMGN2P05204 90 aaKnown RBP2.49□□□□□ -2.01
CD44-213ENST00000525209 COX14Q96I36 57 aa2.49□□□□□ -2.01
CD44-213ENST00000525209 NCOA6Q14686 2063 aaPredicted RBP2.49□□□□□ -2.01
CD44-213ENST00000525209 PDZD2O15018 2839 aa2.49□□□□□ -2.01
CD44-213ENST00000525209 CSPG4Q6UVK1 2322 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 TACC2O95359 2948 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 OTOGQ6ZRI0 2925 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 TRBV6-4A0A1B0GX49 114 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 C10orf142B7Z368 130 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 F8WEM9 126 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 HMGN4O00479 90 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 CCL22O00626 93 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 PDE6GP18545 87 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 DEFB121Q5J5C9 76 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 C20orf197Q8N268 126 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 TVP23CQ96ET8 276 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 TMEM14BQ9NUH8 114 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 JMJD1CQ15652 2540 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 DCHS2Q6V1P9 2916 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 CSMD1Q96PZ7 3565 aa2.48□□□□□ -2.01
CD44-213ENST00000525209 CSMD2Q7Z408 3487 aa2.47□□□□□ -2.01
CD44-213ENST00000525209 DOCK11Q5JSL3 2073 aa2.47□□□□□ -2.01
CD44-213ENST00000525209 A0A087WXM4 84 aa2.47□□□□□ -2.01
CD44-213ENST00000525209 LOC285095A0A1B0GVY8 99 aa2.47□□□□□ -2.01
CD44-213ENST00000525209 ZNF815PA8K554 130 aa2.47□□□□□ -2.01
CD44-213ENST00000525209 IGLV3-1P01715 115 aa2.47□□□□□ -2.01
CD44-213ENST00000525209 SSBP1Q04837 148 aaKnown RBP2.47□□□□□ -2.01
CD44-213ENST00000525209 PSMG4Q5JS54 123 aa2.47□□□□□ -2.01
CD44-213ENST00000525209 ANAPC11Q9NYG5 84 aa2.47□□□□□ -2.01
CD44-213ENST00000525209 HIVEP2P31629 2446 aa2.47□□□□□ -2.01
CD44-213ENST00000525209 MED12Q93074 2177 aa2.46□□□□□ -2.02
CD44-213ENST00000525209 IQCF6A8MYZ5 107 aa2.46□□□□□ -2.02
CD44-213ENST00000525209 JMJD7-PLA2G4BH0Y9G9 81 aa2.46□□□□□ -2.02
CD44-213ENST00000525209 H0YGG7 62 aa2.46□□□□□ -2.02
CD44-213ENST00000525209 PPYP01298 95 aa2.46□□□□□ -2.02
CD44-213ENST00000525209 V9GYH0 126 aa2.46□□□□□ -2.02
CD44-213ENST00000525209 FLNAP21333 2647 aaKnown RBP2.45□□□□□ -2.02
CD44-213ENST00000525209 MYMXA0A1B0GTQ4 84 aa2.45□□□□□ -2.02
CD44-213ENST00000525209 LRCOL1A6NCL2 159 aa2.45□□□□□ -2.02
CD44-213ENST00000525209 KRTAP1-4P0C5Y4 121 aa2.45□□□□□ -2.02
CD44-213ENST00000525209 SAA2P0DJI9 122 aaPredicted RBP2.45□□□□□ -2.02
CD44-213ENST00000525209 CCL3L1P16619 93 aa2.45□□□□□ -2.02
CD44-213ENST00000525209 MT3P25713 68 aa2.45□□□□□ -2.02
CD44-213ENST00000525209 NCBP2-AS2Q69YL0 99 aa2.45□□□□□ -2.02
CD44-213ENST00000525209 Q86TA4 180 aa2.45□□□□□ -2.02
CD44-213ENST00000525209 TP53TG3Q9ULZ0 132 aa2.45□□□□□ -2.02
CD44-213ENST00000525209 NF1P21359 2839 aa2.45□□□□□ -2.02
CD44-213ENST00000525209 FBN3Q75N90 2809 aa2.44□□□□□ -2.02
CD44-213ENST00000525209 IGLV3-32A0A0A0MS00 114 aa2.44□□□□□ -2.02
CD44-213ENST00000525209 FAM223BA6NKX1 122 aa2.44□□□□□ -2.02
CD44-213ENST00000525209 PPP1R17O96001 155 aa2.44□□□□□ -2.02
CD44-213ENST00000525209 IGKV1-17P01599 117 aa2.44□□□□□ -2.02
CD44-213ENST00000525209 SFTA3P0C7M3 94 aa2.44□□□□□ -2.02
CD44-213ENST00000525209 RNASE3P12724 160 aaKnown RBP2.44□□□□□ -2.02
CD44-213ENST00000525209 C10orf55Q5SWW7 151 aa2.44□□□□□ -2.02
CD44-213ENST00000525209 TTTY12Q9BZ98 90 aa2.44□□□□□ -2.02
CD44-213ENST00000525209 PSENENQ9NZ42 101 aa2.44□□□□□ -2.02
CD44-213ENST00000525209 ARFGEF3Q5TH69 2177 aa2.44□□□□□ -2.02
CD44-213ENST00000525209 FN1P02751 2386 aaKnown RBP2.44□□□□□ -2.02
CD44-213ENST00000525209 ALPK2Q86TB3 2170 aa2.43□□□□□ -2.02
CD44-213ENST00000525209 IGLV6-57P01721 117 aa2.43□□□□□ -2.02
CD44-213ENST00000525209 SPAG11BQ08648 103 aa2.43□□□□□ -2.02
CD44-213ENST00000525209 PLGLAQ15195 96 aa2.43□□□□□ -2.02
CD44-213ENST00000525209 KRTAP13-2Q52LG2 175 aa2.43□□□□□ -2.02
CD44-213ENST00000525209 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
CD44-213ENST00000525209 SPAG11AQ6PDA7 123 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms