RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ADAMTSL4-AS1Q5T5F5 129 aa4.78□□□□□ -1.64
CTNNA1-227ENST00000521387 NTN5Q8WTR8 489 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-227ENST00000521387 TRBV6-8A0A0A6YYG3 113 aa4.77□□□□□ -1.65
CTNNA1-227ENST00000521387 IGLV5-39A0A0G2JS06 123 aa4.77□□□□□ -1.65
CTNNA1-227ENST00000521387 A4D1N5 150 aa4.77□□□□□ -1.65
CTNNA1-227ENST00000521387 LYRM9A8MSI8 78 aa4.77□□□□□ -1.65
CTNNA1-227ENST00000521387 TSPAN13O95857 204 aa4.77□□□□□ -1.65
CTNNA1-227ENST00000521387 ATP6V0E2Q8NHE4 81 aa4.77□□□□□ -1.65
CTNNA1-227ENST00000521387 SPANXDQ9BXN6 97 aa4.77□□□□□ -1.65
CTNNA1-227ENST00000521387 SPANXCQ9NY87 97 aa4.77□□□□□ -1.65
CTNNA1-227ENST00000521387 SMIM1B2RUZ4 78 aa4.76□□□□□ -1.65
CTNNA1-227ENST00000521387 TMEM238C9JI98 176 aa4.76□□□□□ -1.65
CTNNA1-227ENST00000521387 NDUFA1O15239 70 aa4.76□□□□□ -1.65
CTNNA1-227ENST00000521387 TIMM17BO60830 172 aa4.76□□□□□ -1.65
CTNNA1-227ENST00000521387 Q6ZRU5 148 aa4.76□□□□□ -1.65
CTNNA1-227ENST00000521387 CIRBP-AS1Q8TBR5 109 aa4.76□□□□□ -1.65
CTNNA1-227ENST00000521387 CHCHD5Q9BSY4 110 aa4.76□□□□□ -1.65
CTNNA1-227ENST00000521387 PRO0255Q9UI72 69 aa4.76□□□□□ -1.65
CTNNA1-227ENST00000521387 A0A096LPF7 62 aa4.75□□□□□ -1.65
CTNNA1-227ENST00000521387 A0A0B4J2C4 111 aa4.75□□□□□ -1.65
CTNNA1-227ENST00000521387 IGKV3OR2-268A0A0C4DH90 116 aa4.75□□□□□ -1.65
CTNNA1-227ENST00000521387 IGHV3-33P01772 117 aa4.75□□□□□ -1.65
CTNNA1-227ENST00000521387 RPL37AP61513 92 aaKnown RBP4.75□□□□□ -1.65
CTNNA1-227ENST00000521387 RPL24P83731 157 aaKnown RBP4.75□□□□□ -1.65
CTNNA1-227ENST00000521387 OCIAD2Q56VL3 154 aa4.75□□□□□ -1.65
CTNNA1-227ENST00000521387 Q8N814 137 aa4.75□□□□□ -1.65
CTNNA1-227ENST00000521387 PRO1854Q9UHT4 67 aa4.75□□□□□ -1.65
CTNNA1-227ENST00000521387 H3BMG7 143 aa4.74□□□□□ -1.65
CTNNA1-227ENST00000521387 PRSS2P07478 247 aa4.74□□□□□ -1.65
CTNNA1-227ENST00000521387 NPC2P61916 151 aa4.74□□□□□ -1.65
CTNNA1-227ENST00000521387 WFDC2Q14508 124 aa4.74□□□□□ -1.65
CTNNA1-227ENST00000521387 MIAQ16674 131 aa4.74□□□□□ -1.65
CTNNA1-227ENST00000521387 SFTA2Q6UW10 78 aa4.74□□□□□ -1.65
CTNNA1-227ENST00000521387 ZNF625Q96I27 306 aaPredicted RBP4.74□□□□□ -1.65
CTNNA1-227ENST00000521387 PRO0461Q9UI25 63 aa4.74□□□□□ -1.65
CTNNA1-227ENST00000521387 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.73□□□□□ -1.65
CTNNA1-227ENST00000521387 LOC107984156A0A0G2JMH3 177 aa4.73□□□□□ -1.65
CTNNA1-227ENST00000521387 LINC00959A0A1B0GUT2 108 aa4.73□□□□□ -1.65
CTNNA1-227ENST00000521387 TMEM262E9PQX1 116 aa4.73□□□□□ -1.65
CTNNA1-227ENST00000521387 PSMB2P49721 201 aa4.73□□□□□ -1.65
CTNNA1-227ENST00000521387 RBX1P62877 108 aa4.73□□□□□ -1.65
CTNNA1-227ENST00000521387 LINC01620Q4KN68 170 aa4.73□□□□□ -1.65
CTNNA1-227ENST00000521387 ARL17AQ8IVW1 177 aa4.73□□□□□ -1.65
CTNNA1-227ENST00000521387 DAND5Q8N907 189 aa4.73□□□□□ -1.65
CTNNA1-227ENST00000521387 ERG28Q9UKR5 140 aa4.73□□□□□ -1.65
CTNNA1-227ENST00000521387 IGHV3OR16-9A0A0B4J2B5 98 aa4.72□□□□□ -1.65
CTNNA1-227ENST00000521387 A0A0U1RRA0 63 aa4.72□□□□□ -1.65
CTNNA1-227ENST00000521387 A0A1B0GUV1 79 aa4.72□□□□□ -1.65
CTNNA1-227ENST00000521387 H7C2G1 150 aa4.72□□□□□ -1.65
CTNNA1-227ENST00000521387 TCL1BO95988 128 aa4.72□□□□□ -1.65
CTNNA1-227ENST00000521387 ATP5G1P05496 136 aa4.72□□□□□ -1.65
CTNNA1-227ENST00000521387 IFITM1P13164 125 aa4.72□□□□□ -1.65
CTNNA1-227ENST00000521387 SOSTDC1Q6X4U4 206 aa4.72□□□□□ -1.65
CTNNA1-227ENST00000521387 C5orf38Q86SI9 138 aa4.72□□□□□ -1.65
CTNNA1-227ENST00000521387 MTURNQ8N3F0 131 aa4.72□□□□□ -1.65
CTNNA1-227ENST00000521387 COX7B2Q8TF08 81 aa4.72□□□□□ -1.65
CTNNA1-227ENST00000521387 TRAV26-1A0A087WT03 109 aa4.71□□□□□ -1.66
CTNNA1-227ENST00000521387 F8W1H4 67 aa4.71□□□□□ -1.66
CTNNA1-227ENST00000521387 SCGB1C2P0DMR2 95 aa4.71□□□□□ -1.66
CTNNA1-227ENST00000521387 KRTAP10-8P60410 259 aa4.71□□□□□ -1.66
CTNNA1-227ENST00000521387 CIRBPQ14011 172 aaKnown RBP4.71□□□□□ -1.66
CTNNA1-227ENST00000521387 RNF151Q2KHN1 245 aa4.71□□□□□ -1.66
CTNNA1-227ENST00000521387 SH2D6Q7Z4S9 175 aa4.71□□□□□ -1.66
CTNNA1-227ENST00000521387 LINC00308Q8TCZ7 52 aa4.71□□□□□ -1.66
CTNNA1-227ENST00000521387 LINC01600Q96MT4 127 aa4.71□□□□□ -1.66
CTNNA1-227ENST00000521387 MUC17Q685J3 4493 aa4.71□□□□□ -1.66
CTNNA1-227ENST00000521387 A0A087WZ39 114 aa4.7□□□□□ -1.66
CTNNA1-227ENST00000521387 PANO1I0J062 215 aa4.7□□□□□ -1.66
CTNNA1-227ENST00000521387 HERV-K104P63124 156 aa4.7□□□□□ -1.66
CTNNA1-227ENST00000521387 SS18Q15532 418 aa4.7□□□□□ -1.66
CTNNA1-227ENST00000521387 MEIG1Q5JSS6 88 aa4.7□□□□□ -1.66
CTNNA1-227ENST00000521387 LYRM7Q5U5X0 104 aa4.7□□□□□ -1.66
CTNNA1-227ENST00000521387 CLPSL2Q6UWE3 100 aa4.7□□□□□ -1.66
CTNNA1-227ENST00000521387 TOMM7Q9P0U1 55 aa4.7□□□□□ -1.66
CTNNA1-227ENST00000521387 TRBV20-1A0A075B6N2 111 aa4.69□□□□□ -1.66
CTNNA1-227ENST00000521387 TRBV30A0A0K0K1B3 111 aa4.69□□□□□ -1.66
CTNNA1-227ENST00000521387 MRPL23Q16540 153 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-227ENST00000521387 ICOSQ9Y6W8 199 aa4.69□□□□□ -1.66
CTNNA1-227ENST00000521387 K7ERU9 68 aa4.68□□□□□ -1.66
CTNNA1-227ENST00000521387 TRIAP1O43715 76 aa4.68□□□□□ -1.66
CTNNA1-227ENST00000521387 RPL13AP40429 203 aaKnown RBP4.68□□□□□ -1.66
CTNNA1-227ENST00000521387 XCL1P47992 114 aa4.68□□□□□ -1.66
CTNNA1-227ENST00000521387 Q1RN00 199 aa4.68□□□□□ -1.66
CTNNA1-227ENST00000521387 ETDBQ3ZM63 59 aa4.68□□□□□ -1.66
CTNNA1-227ENST00000521387 LINC01561Q8N1V8 128 aa4.68□□□□□ -1.66
CTNNA1-227ENST00000521387 LINC00269Q8N2A0 174 aa4.68□□□□□ -1.66
CTNNA1-227ENST00000521387 ANGP03950 147 aaKnown RBP4.67□□□□□ -1.66
CTNNA1-227ENST00000521387 LYPD5Q6UWN5 251 aa4.67□□□□□ -1.66
CTNNA1-227ENST00000521387 MIR7-3HGQ8N6C7 128 aa4.67□□□□□ -1.66
CTNNA1-227ENST00000521387 CHCHD10Q8WYQ3 142 aaPredicted RBP4.67□□□□□ -1.66
CTNNA1-227ENST00000521387 PPDPFQ9H3Y8 114 aa4.67□□□□□ -1.66
CTNNA1-227ENST00000521387 CBY1Q9Y3M2 126 aa4.67□□□□□ -1.66
CTNNA1-227ENST00000521387 LINC00158P58513 81 aa4.66□□□□□ -1.66
CTNNA1-227ENST00000521387 REG3AQ06141 175 aa4.66□□□□□ -1.66
CTNNA1-227ENST00000521387 KIAA0087Q14695 138 aa4.66□□□□□ -1.66
CTNNA1-227ENST00000521387 CD164L2Q6UWJ8 174 aa4.66□□□□□ -1.66
CTNNA1-227ENST00000521387 COPS9Q8WXC6 57 aa4.66□□□□□ -1.66
CTNNA1-227ENST00000521387 CARD19Q96LW7 228 aa4.66□□□□□ -1.66
CTNNA1-227ENST00000521387 VPS25Q9BRG1 176 aa4.66□□□□□ -1.66
CTNNA1-227ENST00000521387 IGLV10-54A0A075B6I4 117 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms