RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 NNATQ16517 81 aa1.91□□□□□ -2.1
SKP1-208ENST00000521216 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
SKP1-208ENST00000521216 FDCSPQ8NFU4 85 aa1.91□□□□□ -2.1
SKP1-208ENST00000521216 KCNQ1DNQ9H478 68 aa1.91□□□□□ -2.1
SKP1-208ENST00000521216 COL4A5P29400 1685 aa1.9□□□□□ -2.1
SKP1-208ENST00000521216 TRGV2A0A075B6R0 118 aa1.9□□□□□ -2.11
SKP1-208ENST00000521216 IGKV2-29A2NJV5 120 aaPredicted RBP1.9□□□□□ -2.11
SKP1-208ENST00000521216 NDUFA4O00483 81 aa1.9□□□□□ -2.11
SKP1-208ENST00000521216 PCOTHQ58A44 107 aa1.9□□□□□ -2.11
SKP1-208ENST00000521216 SPINK9Q5DT21 86 aa1.9□□□□□ -2.11
SKP1-208ENST00000521216 C1orf137Q5JT78 98 aa1.9□□□□□ -2.11
SKP1-208ENST00000521216 FAM27BQ5VT28 67 aa1.9□□□□□ -2.11
SKP1-208ENST00000521216 CSAG1Q6PB30 78 aa1.9□□□□□ -2.11
SKP1-208ENST00000521216 FAM215AQ9Y5M1 114 aa1.9□□□□□ -2.11
SKP1-208ENST00000521216 ARFGEF3Q5TH69 2177 aa1.9□□□□□ -2.11
SKP1-208ENST00000521216 MYO7BQ6PIF6 2116 aa1.9□□□□□ -2.11
SKP1-208ENST00000521216 MED12Q93074 2177 aa1.89□□□□□ -2.11
SKP1-208ENST00000521216 H3BRN7 92 aa1.89□□□□□ -2.11
SKP1-208ENST00000521216 MGPP08493 103 aa1.89□□□□□ -2.11
SKP1-208ENST00000521216 SPTBP11277 2137 aa1.89□□□□□ -2.11
SKP1-208ENST00000521216 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
SKP1-208ENST00000521216 SPATA8Q6RVD6 105 aa1.89□□□□□ -2.11
SKP1-208ENST00000521216 SMIM11BQ8TCY0 68 aa1.89□□□□□ -2.11
SKP1-208ENST00000521216 DMAC1Q96GE9 116 aa1.89□□□□□ -2.11
SKP1-208ENST00000521216 GAFA1Q96PS6 74 aa1.89□□□□□ -2.11
SKP1-208ENST00000521216 TTTY12Q9BZ98 90 aa1.89□□□□□ -2.11
SKP1-208ENST00000521216 GOLGA4Q13439 2230 aaKnown RBP1.89□□□□□ -2.11
SKP1-208ENST00000521216 ODF3BA8MYP8 253 aa1.88□□□□□ -2.11
SKP1-208ENST00000521216 UQCR11O14957 56 aa1.88□□□□□ -2.11
SKP1-208ENST00000521216 TFF1P04155 84 aa1.88□□□□□ -2.11
SKP1-208ENST00000521216 SPRR4Q96PI1 79 aa1.88□□□□□ -2.11
SKP1-208ENST00000521216 INTS1Q8N201 2190 aaKnown RBP1.88□□□□□ -2.11
SKP1-208ENST00000521216 COX7BP24311 80 aa1.87□□□□□ -2.11
SKP1-208ENST00000521216 CCL18P55774 89 aa1.87□□□□□ -2.11
SKP1-208ENST00000521216 KRTAP26-1Q6PEX3 210 aa1.87□□□□□ -2.11
SKP1-208ENST00000521216 COA5Q86WW8 74 aa1.87□□□□□ -2.11
SKP1-208ENST00000521216 Q8TAT8 98 aa1.87□□□□□ -2.11
SKP1-208ENST00000521216 MINOS1-NBL1R4GNA1 71 aa1.87□□□□□ -2.11
SKP1-208ENST00000521216 HEATR5BQ9P2D3 2071 aa1.87□□□□□ -2.11
SKP1-208ENST00000521216 ARHGAP32A7KAX9 2087 aa1.86□□□□□ -2.11
SKP1-208ENST00000521216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.86□□□□□ -2.11
SKP1-208ENST00000521216 MRPL33O75394 65 aaKnown RBP1.86□□□□□ -2.11
SKP1-208ENST00000521216 SPINK7P58062 85 aa1.86□□□□□ -2.11
SKP1-208ENST00000521216 DEFB112Q30KQ8 113 aa1.86□□□□□ -2.11
SKP1-208ENST00000521216 Q6ZTI0 123 aa1.86□□□□□ -2.11
SKP1-208ENST00000521216 TMEM167AQ8TBQ9 72 aa1.86□□□□□ -2.11
SKP1-208ENST00000521216 MUC4Q99102 2169 aa1.85□□□□□ -2.11
SKP1-208ENST00000521216 MUC6Q6W4X9 2439 aa1.85□□□□□ -2.11
SKP1-208ENST00000521216 TRBV6-4A0A1B0GX49 114 aa1.85□□□□□ -2.11
SKP1-208ENST00000521216 NUPR2A6NF83 97 aa1.85□□□□□ -2.11
SKP1-208ENST00000521216 C9orf163Q8N9P6 203 aa1.85□□□□□ -2.11
SKP1-208ENST00000521216 RPL39LQ96EH5 51 aaKnown RBP1.85□□□□□ -2.11
SKP1-208ENST00000521216 ESPL1Q14674 2120 aa1.85□□□□□ -2.11
SKP1-208ENST00000521216 ZFHX3Q15911 3703 aa1.84□□□□□ -2.11
SKP1-208ENST00000521216 IGHV3-64A0A075B6Q5 118 aa1.84□□□□□ -2.11
SKP1-208ENST00000521216 CCL3L1P16619 93 aa1.84□□□□□ -2.11
SKP1-208ENST00000521216 RPL39P62891 51 aaKnown RBP1.84□□□□□ -2.11
SKP1-208ENST00000521216 LINC00575Q6W349 94 aa1.84□□□□□ -2.11
SKP1-208ENST00000521216 COX14Q96I36 57 aa1.84□□□□□ -2.11
SKP1-208ENST00000521216 PI4KAP42356 2102 aa1.84□□□□□ -2.12
SKP1-208ENST00000521216 CR1P17927 2039 aa1.83□□□□□ -2.12
SKP1-208ENST00000521216 IGKV2-40A0A087WW87 121 aaPredicted RBP1.83□□□□□ -2.12
SKP1-208ENST00000521216 DEFB131BA0A096LNP1 70 aa1.83□□□□□ -2.12
SKP1-208ENST00000521216 LINC00959A0A1B0GUT2 108 aa1.83□□□□□ -2.12
SKP1-208ENST00000521216 IGKV2D-40P01614 121 aaPredicted RBP1.83□□□□□ -2.12
SKP1-208ENST00000521216 LINC00158P58513 81 aa1.83□□□□□ -2.12
SKP1-208ENST00000521216 WT1-ASQ06250 92 aa1.83□□□□□ -2.12
SKP1-208ENST00000521216 COX17Q14061 63 aa1.83□□□□□ -2.12
SKP1-208ENST00000521216 DEFB113Q30KQ7 82 aa1.83□□□□□ -2.12
SKP1-208ENST00000521216 PSORS1C2Q9UIG4 136 aa1.83□□□□□ -2.12
SKP1-208ENST00000521216 MED13Q9UHV7 2174 aa1.83□□□□□ -2.12
SKP1-208ENST00000521216 ZGRF1Q86YA3 2104 aa1.82□□□□□ -2.12
SKP1-208ENST00000521216 FREM1Q5H8C1 2179 aa1.82□□□□□ -2.12
SKP1-208ENST00000521216 IGKV3-7A0A075B6H7 116 aa1.82□□□□□ -2.12
SKP1-208ENST00000521216 I3L2K1 104 aa1.81□□□□□ -2.12
SKP1-208ENST00000521216 M0QY20 66 aa1.81□□□□□ -2.12
SKP1-208ENST00000521216 RNASE3P12724 160 aaKnown RBP1.81□□□□□ -2.12
SKP1-208ENST00000521216 RPL39P5Q59GN2 51 aa1.81□□□□□ -2.12
SKP1-208ENST00000521216 Q6ZQY7 126 aa1.81□□□□□ -2.12
SKP1-208ENST00000521216 C4orf3Q8WVX3 66 aa1.81□□□□□ -2.12
SKP1-208ENST00000521216 CDKN2A-AS1Q9UH64 79 aa1.81□□□□□ -2.12
SKP1-208ENST00000521216 H0YGG7 62 aa1.8□□□□□ -2.12
SKP1-208ENST00000521216 Q8IZM0 81 aa1.8□□□□□ -2.12
SKP1-208ENST00000521216 PRRC2BQ5JSZ5 2229 aaKnown RBP1.8□□□□□ -2.12
SKP1-208ENST00000521216 A0A096LNT2 108 aa1.79□□□□□ -2.12
SKP1-208ENST00000521216 TRGV1A0A0A0MS02 117 aa1.79□□□□□ -2.12
SKP1-208ENST00000521216 IGKV3OR2-268A0A0C4DH90 116 aa1.79□□□□□ -2.12
SKP1-208ENST00000521216 K7EIM0 57 aa1.79□□□□□ -2.12
SKP1-208ENST00000521216 M0R2N4 97 aa1.79□□□□□ -2.12
SKP1-208ENST00000521216 DOCK10Q96BY6 2186 aa1.79□□□□□ -2.12
SKP1-208ENST00000521216 CACNA1CQ13936 2221 aa1.79□□□□□ -2.12
SKP1-208ENST00000521216 A0A1B0GU69 56 aa1.78□□□□□ -2.12
SKP1-208ENST00000521216 DEFB108AA8MXU0 73 aa1.78□□□□□ -2.12
SKP1-208ENST00000521216 STATHP02808 62 aa1.78□□□□□ -2.12
SKP1-208ENST00000521216 DEFB132Q7Z7B7 95 aa1.78□□□□□ -2.12
SKP1-208ENST00000521216 TP53AIP1Q9HCN2 124 aa1.78□□□□□ -2.12
SKP1-208ENST00000521216 KMT2BQ9UMN6 2715 aaPredicted RBP1.77□□□□□ -2.13
SKP1-208ENST00000521216 DNAJC13O75165 2243 aa1.77□□□□□ -2.13
SKP1-208ENST00000521216 IGLV5-48A0A075B6I7 105 aa1.77□□□□□ -2.13
SKP1-208ENST00000521216 KLK9Q2XQG4 91 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms