RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 KANTRA0A1W2PQU2 76 aa0.45□□□□□ -2.34
PTPN12-214ENST00000520947 I3L3M4 83 aa0.45□□□□□ -2.34
PTPN12-214ENST00000520947 DEFB112Q30KQ8 113 aa0.45□□□□□ -2.34
PTPN12-214ENST00000520947 TDRG1Q3Y452 100 aa0.45□□□□□ -2.34
PTPN12-214ENST00000520947 CSMD3Q7Z407 3707 aa0.45□□□□□ -2.34
PTPN12-214ENST00000520947 GVINP1Q7Z2Y8 2422 aa0.45□□□□□ -2.34
PTPN12-214ENST00000520947 MACF1Q9UPN3 7388 aaKnown RBP0.44□□□□□ -2.34
PTPN12-214ENST00000520947 USF3Q68DE3 2245 aa0.44□□□□□ -2.34
PTPN12-214ENST00000520947 SPTY2D1-AS1A0A0U1RR47 76 aa0.44□□□□□ -2.34
PTPN12-214ENST00000520947 S100A13Q99584 98 aa0.43□□□□□ -2.34
PTPN12-214ENST00000520947 PKD1L3Q7Z443 1732 aa0.43□□□□□ -2.34
PTPN12-214ENST00000520947 PTPN13Q12923 2485 aa0.43□□□□□ -2.34
PTPN12-214ENST00000520947 LRRC7Q96NW7 1537 aa0.43□□□□□ -2.34
PTPN12-214ENST00000520947 MYH4Q9Y623 1939 aa0.42□□□□□ -2.34
PTPN12-214ENST00000520947 TMEM131LA2VDJ0 1609 aa0.42□□□□□ -2.34
PTPN12-214ENST00000520947 ARHGAP35Q9NRY4 1499 aa0.42□□□□□ -2.34
PTPN12-214ENST00000520947 CEBPZOSA8MTT3 80 aa0.42□□□□□ -2.34
PTPN12-214ENST00000520947 NCOR2Q9Y618 2525 aa0.42□□□□□ -2.34
PTPN12-214ENST00000520947 HIVEP3Q5T1R4 2406 aa0.42□□□□□ -2.34
PTPN12-214ENST00000520947 OTOGQ6ZRI0 2925 aa0.41□□□□□ -2.34
PTPN12-214ENST00000520947 CHD6Q8TD26 2715 aa0.41□□□□□ -2.34
PTPN12-214ENST00000520947 PTPRQQ9UMZ3 2332 aa0.41□□□□□ -2.34
PTPN12-214ENST00000520947 CPSF4LA6NMK7 179 aaKnown RBP0.41□□□□□ -2.34
PTPN12-214ENST00000520947 SPINK4O60575 86 aa0.41□□□□□ -2.34
PTPN12-214ENST00000520947 DEFB105AQ8NG35 78 aa0.41□□□□□ -2.34
PTPN12-214ENST00000520947 PKDREJQ9NTG1 2253 aa0.41□□□□□ -2.34
PTPN12-214ENST00000520947 IGSF10Q6WRI0 2623 aa0.4□□□□□ -2.34
PTPN12-214ENST00000520947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.4□□□□□ -2.35
PTPN12-214ENST00000520947 DCAF1Q9Y4B6 1507 aa0.4□□□□□ -2.35
PTPN12-214ENST00000520947 ADIRFQ15847 76 aa0.4□□□□□ -2.35
PTPN12-214ENST00000520947 FXYD6Q9H0Q3 95 aa0.4□□□□□ -2.35
PTPN12-214ENST00000520947 ST20Q9HBF5 79 aa0.4□□□□□ -2.35
PTPN12-214ENST00000520947 DOPEY2Q9Y3R5 2298 aa0.4□□□□□ -2.35
PTPN12-214ENST00000520947 MUC5ACP98088 5654 aa0.4□□□□□ -2.35
PTPN12-214ENST00000520947 NCOR1O75376 2440 aa0.39□□□□□ -2.35
PTPN12-214ENST00000520947 CLIP1P30622 1438 aa0.39□□□□□ -2.35
PTPN12-214ENST00000520947 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
PTPN12-214ENST00000520947 TSC2P49815 1807 aa0.39□□□□□ -2.35
PTPN12-214ENST00000520947 CCL22O00626 93 aa0.39□□□□□ -2.35
PTPN12-214ENST00000520947 COX7BP24311 80 aa0.39□□□□□ -2.35
PTPN12-214ENST00000520947 RPL38P63173 70 aaKnown RBP0.39□□□□□ -2.35
PTPN12-214ENST00000520947 ERVK-7P63135 1459 aa0.39□□□□□ -2.35
PTPN12-214ENST00000520947 URB1O60287 2271 aaKnown RBP0.39□□□□□ -2.35
PTPN12-214ENST00000520947 TENM4Q6N022 2769 aa0.39□□□□□ -2.35
PTPN12-214ENST00000520947 URB2Q14146 1524 aaKnown RBP0.38□□□□□ -2.35
PTPN12-214ENST00000520947 NDUFB1O75438 58 aa0.38□□□□□ -2.35
PTPN12-214ENST00000520947 MRPL34Q9BQ48 92 aaKnown RBP0.38□□□□□ -2.35
PTPN12-214ENST00000520947 MAST4O15021 2626 aa0.38□□□□□ -2.35
PTPN12-214ENST00000520947 SUPT6HQ7KZ85 1726 aaKnown RBP0.38□□□□□ -2.35
PTPN12-214ENST00000520947 FMN2Q9NZ56 1722 aa0.38□□□□□ -2.35
PTPN12-214ENST00000520947 KDM5DQ9BY66 1539 aa0.38□□□□□ -2.35
PTPN12-214ENST00000520947 DIP2BQ9P265 1576 aa0.37□□□□□ -2.35
PTPN12-214ENST00000520947 GAFA1Q96PS6 74 aa0.37□□□□□ -2.35
PTPN12-214ENST00000520947 QSER1Q2KHR3 1735 aa0.37□□□□□ -2.35
PTPN12-214ENST00000520947 SYNE2Q8WXH0 6885 aaKnown RBP0.37□□□□□ -2.35
PTPN12-214ENST00000520947 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
PTPN12-214ENST00000520947 ABCC1P33527 1531 aa0.35□□□□□ -2.35
PTPN12-214ENST00000520947 ATP5EP2Q5VTU8 51 aa0.35□□□□□ -2.35
PTPN12-214ENST00000520947 APLNQ9ULZ1 77 aa0.35□□□□□ -2.35
PTPN12-214ENST00000520947 KIF20BQ96Q89 1820 aa0.35□□□□□ -2.35
PTPN12-214ENST00000520947 UBR5O95071 2799 aaPredicted RBP0.35□□□□□ -2.35
PTPN12-214ENST00000520947 RGPD1P0DJD0 1748 aa0.35□□□□□ -2.35
PTPN12-214ENST00000520947 USP32Q8NFA0 1604 aa0.35□□□□□ -2.35
PTPN12-214ENST00000520947 ANKRD36A6QL64 1941 aa0.34□□□□□ -2.35
PTPN12-214ENST00000520947 VWFP04275 2813 aa0.34□□□□□ -2.35
PTPN12-214ENST00000520947 MAGI3Q5TCQ9 1506 aa0.34□□□□□ -2.35
PTPN12-214ENST00000520947 FSIP2Q5CZC0 6907 aa0.34□□□□□ -2.35
PTPN12-214ENST00000520947 ABCA2Q9BZC7 2435 aa0.34□□□□□ -2.35
PTPN12-214ENST00000520947 TRAV21A0A0B4J279 112 aa0.34□□□□□ -2.36
PTPN12-214ENST00000520947 CACNA1AO00555 2505 aa0.34□□□□□ -2.36
PTPN12-214ENST00000520947 FAT4Q6V0I7 4981 aa0.34□□□□□ -2.36
PTPN12-214ENST00000520947 PREX1Q8TCU6 1659 aa0.33□□□□□ -2.36
PTPN12-214ENST00000520947 SPTA1P02549 2419 aa0.33□□□□□ -2.36
PTPN12-214ENST00000520947 WFDC9Q8NEX5 89 aa0.33□□□□□ -2.36
PTPN12-214ENST00000520947 LRP1Q07954 4544 aaKnown RBP0.33□□□□□ -2.36
PTPN12-214ENST00000520947 ATRQ13535 2644 aa0.33□□□□□ -2.36
PTPN12-214ENST00000520947 CFAP74Q9C0B2 1584 aa0.32□□□□□ -2.36
PTPN12-214ENST00000520947 CEP170BQ9Y4F5 1589 aaPredicted RBP0.32□□□□□ -2.36
PTPN12-214ENST00000520947 COL14A1Q05707 1796 aaKnown RBP0.32□□□□□ -2.36
PTPN12-214ENST00000520947 RRBP1Q9P2E9 1410 aaKnown RBP0.32□□□□□ -2.36
PTPN12-214ENST00000520947 KLK9Q2XQG4 91 aa0.32□□□□□ -2.36
PTPN12-214ENST00000520947 H1FX-AS1Q4G0G2 97 aa0.32□□□□□ -2.36
PTPN12-214ENST00000520947 WNK2Q9Y3S1 2297 aa0.32□□□□□ -2.36
PTPN12-214ENST00000520947 RGPD2P0DJD1 1756 aa0.32□□□□□ -2.36
PTPN12-214ENST00000520947 PIK3C2BO00750 1634 aa0.31□□□□□ -2.36
PTPN12-214ENST00000520947 CCDC88BA6NC98 1476 aa0.31□□□□□ -2.36
PTPN12-214ENST00000520947 NCOA2Q15596 1464 aa0.31□□□□□ -2.36
PTPN12-214ENST00000520947 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
PTPN12-214ENST00000520947 KMT2DO14686 5537 aa0.3□□□□□ -2.36
PTPN12-214ENST00000520947 BVES-AS1Q5T3Y7 98 aa0.3□□□□□ -2.36
PTPN12-214ENST00000520947 COX6B2Q6YFQ2 88 aa0.3□□□□□ -2.36
PTPN12-214ENST00000520947 BCORQ6W2J9 1755 aa0.29□□□□□ -2.36
PTPN12-214ENST00000520947 H3BUT2 72 aa0.29□□□□□ -2.36
PTPN12-214ENST00000520947 DEFB121Q5J5C9 76 aa0.29□□□□□ -2.36
PTPN12-214ENST00000520947 HEPN1Q6WQI6 88 aa0.29□□□□□ -2.36
PTPN12-214ENST00000520947 DMBT1Q9UGM3 2413 aaPredicted RBP0.29□□□□□ -2.36
PTPN12-214ENST00000520947 POLR1AO95602 1720 aaPredicted RBP0.29□□□□□ -2.36
PTPN12-214ENST00000520947 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.29□□□□□ -2.365e-6■■■■□ 22.8
PTPN12-214ENST00000520947 RGPD8O14715 1765 aaPredicted RBP0.28□□□□□ -2.36
PTPN12-214ENST00000520947 RGPD5Q99666 1765 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms