RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SPENQ96T58 3664 aaKnown RBP1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 PIEZO2Q9H5I5 2752 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 COL6A6A6NMZ7 2263 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 IGLV1-50A0A075B6I6 118 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 IGHV3-49A0A0A0MS15 119 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 TRAV13-2A0A0B4J235 113 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 IGKV3D-7A0A0C4DH55 119 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 TRBV7-4A0A0J9YYF1 115 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 H3BUX3 64 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 ERC2-IT1O76042 136 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 ATP5EP56381 51 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 MOBPQ13875 183 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 BRD3OSQ6XYD6 125 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 TMEM243Q9BU79 118 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 ACACAQ13085 2346 aa1.86□□□□□ -2.11
HMGB1P41-201ENST00000520234 SMG1Q96Q15 3661 aaKnown RBP1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 BSNQ9UPA5 3926 aa1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 IGKV2-29A2NJV5 120 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 F6UB75 175 aa1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 NDUFC1O43677 76 aa1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 CD164Q04900 197 aa1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 FAM229BQ4G0N7 80 aa1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 C20orf197Q8N268 126 aa1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 LINC00337Q8N6G1 96 aa1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 C11orf72Q8NBR9 251 aa1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 WFDC11Q8NEX6 87 aa1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 CCL19Q99731 98 aa1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 AKAP6Q13023 2319 aa1.85□□□□□ -2.11
HMGB1P41-201ENST00000520234 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 C2CD3Q4AC94 2353 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 TRAV12-3A0A0B4J271 114 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 LCE6AA0A183 80 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 KNCNA6PVL3 124 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 IGHV3-11P01762 117 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 IGHV3-53P01767 116 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 MGPP08493 103 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 CMC4P56277 68 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 DEFB1P60022 68 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 SYCNQ0VAF6 134 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 PMAIP1Q13794 54 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 LY6EQ16553 131 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 Q1T7F1 81 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 DEFB112Q30KQ8 113 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 IGFL1Q6UW32 110 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 COPS9Q8WXC6 57 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 CHCHD7Q9BUK0 85 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 C14orf132Q9NPU4 83 aa1.84□□□□□ -2.11
HMGB1P41-201ENST00000520234 LAMA5O15230 3695 aa1.84□□□□□ -2.12
HMGB1P41-201ENST00000520234 ADGRG4Q8IZF6 3080 aa1.84□□□□□ -2.12
HMGB1P41-201ENST00000520234 DCHS2Q6V1P9 2916 aa1.84□□□□□ -2.12
HMGB1P41-201ENST00000520234 ASPMQ8IZT6 3477 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 DMXL2Q8TDJ6 3036 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 PTPRZ1P23471 2315 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 HRNRQ86YZ3 2850 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 CEP295Q9C0D2 2601 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 IGHV3-64A0A075B6Q5 118 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 LOC110117498A0A087WWA1 95 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 TRAV10A0A0B4J240 114 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 TRBV10-1A0A0K0K1A3 114 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 A0A0U1RQV1 116 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 DNAL4O96015 105 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 MIFP14174 115 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 KRTAP10-10P60014 251 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 RBMY1FQ15415 496 aaKnown RBP1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 DEFB114Q30KQ6 69 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 PP632Q6XCG6 107 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 NTM-AS1Q6ZSK4 140 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 MIR7-3HGQ8N6C7 128 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 RMI2Q96E14 147 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 TM2D3Q9BRN9 247 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 CDKN2A-AS1Q9UH64 79 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 MUC6Q6W4X9 2439 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 ABCA2Q9BZC7 2435 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 DMXL1Q9Y485 3027 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 BOD1L1Q8NFC6 3051 aa1.83□□□□□ -2.12
HMGB1P41-201ENST00000520234 ATMQ13315 3056 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 TRAV23DV6A0A075B6W5 121 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 hDV103S1A0JD37 113 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 F8WEM9 126 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 H0YGX0 51 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 NCR3O14931 201 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 COX6A2Q02221 97 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 CIRBPQ14011 172 aaKnown RBP1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 SPINK13Q1W4C9 94 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 S100A7L2Q5SY68 101 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 C10orf99Q6UWK7 81 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 ENHOQ6UWT2 76 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 WFDC9Q8NEX5 89 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 SMIM11BQ8TCY0 68 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 BRK1Q8WUW1 75 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 C4orf3Q8WVX3 66 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 ZCCHC13Q8WW36 166 aaKnown RBP1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 LAMTOR3Q9UHA4 124 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 SPTAN1Q13813 2472 aaKnown RBP1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 LRBAP50851 2863 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 DCHS1Q96JQ0 3298 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 CSMD1Q96PZ7 3565 aa1.82□□□□□ -2.12
HMGB1P41-201ENST00000520234 CREBBPQ92793 2442 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 IGKV3-7A0A075B6H7 116 aa1.81□□□□□ -2.12
HMGB1P41-201ENST00000520234 CD28P10747 220 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms