RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 DNAH11Q96DT5 4516 aa-1.54□□□□□ -2.66
NPM1-206ENST00000519955 ANKRD11Q6UB99 2663 aaPredicted RBP-1.55□□□□□ -2.66
NPM1-206ENST00000519955 EIF4G3O43432 1585 aaKnown RBP-1.55□□□□□ -2.66
NPM1-206ENST00000519955 VPS13BQ7Z7G8 4022 aa-1.56□□□□□ -2.66
NPM1-206ENST00000519955 PAPPA2Q9BXP8 1791 aa-1.56□□□□□ -2.66
NPM1-206ENST00000519955 SNCAP37840 140 aa-1.56□□□□□ -2.66
NPM1-206ENST00000519955 CGREF1Q99674 301 aa-1.56□□□□□ -2.66
NPM1-206ENST00000519955 NBASA2RRP1 2371 aa-1.56□□□□□ -2.66
NPM1-206ENST00000519955 NKTRP30414 1462 aaKnown RBP-1.56□□□□□ -2.66
NPM1-206ENST00000519955 WDR87Q6ZQQ6 2873 aa-1.57□□□□□ -2.66
NPM1-206ENST00000519955 DNHD1Q96M86 4753 aa-1.57□□□□□ -2.66
NPM1-206ENST00000519955 A0A087WVE0 104 aa-1.57□□□□□ -2.66
NPM1-206ENST00000519955 S100A1P23297 94 aa-1.57□□□□□ -2.66
NPM1-206ENST00000519955 DSPP15924 2871 aaKnown RBP-1.58□□□□□ -2.66
NPM1-206ENST00000519955 H1FX-AS1Q4G0G2 97 aa-1.58□□□□□ -2.66
NPM1-206ENST00000519955 VAMP8Q9BV40 100 aa-1.58□□□□□ -2.66
NPM1-206ENST00000519955 SPHKAPQ2M3C7 1700 aa-1.59□□□□□ -2.66
NPM1-206ENST00000519955 I3L3M4 83 aa-1.59□□□□□ -2.66
NPM1-206ENST00000519955 C6orf201Q7Z4U5 140 aa-1.59□□□□□ -2.66
NPM1-206ENST00000519955 PZPP20742 1482 aa-1.59□□□□□ -2.66
NPM1-206ENST00000519955 APOBP04114 4563 aaKnown RBP-1.59□□□□□ -2.66
NPM1-206ENST00000519955 EDC4Q6P2E9 1401 aaKnown RBP-1.59□□□□□ -2.66
NPM1-206ENST00000519955 MARF1Q9Y4F3 1742 aaKnown RBP-1.6□□□□□ -2.67
NPM1-206ENST00000519955 TMEM262E9PQX1 116 aa-1.6□□□□□ -2.67
NPM1-206ENST00000519955 C7orf77A4D0Y5 90 aa-1.61□□□□□ -2.67
NPM1-206ENST00000519955 H3BQF6 201 aa-1.61□□□□□ -2.67
NPM1-206ENST00000519955 MT1AP04731 61 aa-1.61□□□□□ -2.67
NPM1-206ENST00000519955 LYSTQ99698 3801 aa-1.61□□□□□ -2.67
NPM1-206ENST00000519955 GNG8Q9UK08 70 aa-1.61□□□□□ -2.67
NPM1-206ENST00000519955 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.61□□□□□ -2.671e-10■■■■■ 30.3
NPM1-206ENST00000519955 ZZEF1O43149 2961 aa-1.62□□□□□ -2.67
NPM1-206ENST00000519955 TMEM203Q969S6 136 aa-1.62□□□□□ -2.67
NPM1-206ENST00000519955 DNAH1Q9P2D7 4330 aa-1.62□□□□□ -2.67
NPM1-206ENST00000519955 ACACAQ13085 2346 aa-1.63□□□□□ -2.67
NPM1-206ENST00000519955 KNL1Q8NG31 2342 aa-1.63□□□□□ -2.67
NPM1-206ENST00000519955 MRPS10P82664 201 aaKnown RBP-1.63□□□□□ -2.67
NPM1-206ENST00000519955 PDCD11Q14690 1871 aaKnown RBP-1.63□□□□□ -2.67
NPM1-206ENST00000519955 CC2D2AQ9P2K1 1620 aa-1.63□□□□□ -2.67
NPM1-206ENST00000519955 COL4A6Q14031 1691 aa-1.64□□□□□ -2.67
NPM1-206ENST00000519955 CMYA5Q8N3K9 4069 aa-1.64□□□□□ -2.67
NPM1-206ENST00000519955 hADV29S1A0JD25 119 aa-1.64□□□□□ -2.67
NPM1-206ENST00000519955 C2orf88Q9BSF0 95 aa-1.64□□□□□ -2.67
NPM1-206ENST00000519955 KALRNO60229 2985 aa-1.64□□□□□ -2.67
NPM1-206ENST00000519955 SACSQ9NZJ4 4579 aa-1.65□□□□□ -2.67
NPM1-206ENST00000519955 C9orf62Q8N4C0 152 aa-1.65□□□□□ -2.67
NPM1-206ENST00000519955 CHD1O14646 1710 aa-1.66□□□□□ -2.67
NPM1-206ENST00000519955 DMXL1Q9Y485 3027 aa-1.66□□□□□ -2.67
NPM1-206ENST00000519955 TOPAZ1Q8N9V7 1692 aa-1.66□□□□□ -2.68
NPM1-206ENST00000519955 DYNC1H1Q14204 4646 aaKnown RBP-1.66□□□□□ -2.68
NPM1-206ENST00000519955 A0A0G2JND7 137 aa-1.66□□□□□ -2.68
NPM1-206ENST00000519955 H0Y9P7 68 aa-1.66□□□□□ -2.68
NPM1-206ENST00000519955 HSD52Q0P140 79 aa-1.66□□□□□ -2.68
NPM1-206ENST00000519955 DEFB112Q30KQ8 113 aa-1.66□□□□□ -2.68
NPM1-206ENST00000519955 GTF2H5Q6ZYL4 71 aa-1.66□□□□□ -2.68
NPM1-206ENST00000519955 DNAH7Q8WXX0 4024 aa-1.66□□□□□ -2.68
NPM1-206ENST00000519955 MGAM2Q2M2H8 2515 aa-1.67□□□□□ -2.68
NPM1-206ENST00000519955 RIF1Q5UIP0 2472 aaKnown RBP-1.67□□□□□ -2.68
NPM1-206ENST00000519955 DEFB107AQ8IZN7 70 aa-1.68□□□□□ -2.68
NPM1-206ENST00000519955 LRRC37AA6NMS7 1700 aa-1.69□□□□□ -2.68
NPM1-206ENST00000519955 GNGT1P63211 74 aa-1.69□□□□□ -2.68
NPM1-206ENST00000519955 CACFD1Q9UGQ2 172 aa-1.69□□□□□ -2.68
NPM1-206ENST00000519955 RELNP78509 3460 aa-1.69□□□□□ -2.68
NPM1-206ENST00000519955 NDUFC1O43677 76 aa-1.7□□□□□ -2.68
NPM1-206ENST00000519955 PKD1L2Q7Z442 2459 aa-1.7□□□□□ -2.68
NPM1-206ENST00000519955 TRBV25-1A0A075B6N4 114 aa-1.71□□□□□ -2.68
NPM1-206ENST00000519955 PSMG4Q5JS54 123 aa-1.71□□□□□ -2.68
NPM1-206ENST00000519955 TARBP1Q13395 1621 aaKnown RBP-1.71□□□□□ -2.68
NPM1-206ENST00000519955 SLIT1O75093 1534 aa-1.71□□□□□ -2.68
NPM1-206ENST00000519955 A0A0C4DFX4 3053 aa-1.72□□□□□ -2.68
NPM1-206ENST00000519955 ABCC5O15440 1437 aa-1.72□□□□□ -2.68
NPM1-206ENST00000519955 ARMS2P0C7Q2 107 aa-1.72□□□□□ -2.68
NPM1-206ENST00000519955 PMCHL1Q16048 86 aa-1.72□□□□□ -2.68
NPM1-206ENST00000519955 MRPL34Q9BQ48 92 aaKnown RBP-1.72□□□□□ -2.68
NPM1-206ENST00000519955 NBEAQ8NFP9 2946 aa-1.72□□□□□ -2.69
NPM1-206ENST00000519955 KNDC1Q76NI1 1749 aa-1.72□□□□□ -2.69
NPM1-206ENST00000519955 KIAA1551Q9HCM1 1747 aa-1.72□□□□□ -2.69
NPM1-206ENST00000519955 COL12A1Q99715 3063 aa-1.73□□□□□ -2.69
NPM1-206ENST00000519955 CCL22O00626 93 aa-1.73□□□□□ -2.69
NPM1-206ENST00000519955 LRRK2Q5S007 2527 aa-1.73□□□□□ -2.69
NPM1-206ENST00000519955 ASIPP42127 132 aa-1.74□□□□□ -2.69
NPM1-206ENST00000519955 FAM135AQ9P2D6 1515 aa-1.75□□□□□ -2.69
NPM1-206ENST00000519955 CELSR3Q9NYQ7 3312 aa-1.75□□□□□ -2.69
NPM1-206ENST00000519955 LINC00587B1AMM8 73 aa-1.75□□□□□ -2.69
NPM1-206ENST00000519955 UTP20O75691 2785 aaKnown RBP-1.75□□□□□ -2.69
NPM1-206ENST00000519955 REV3LO60673 3130 aa-1.75□□□□□ -2.69
NPM1-206ENST00000519955 SHPRHQ149N8 1683 aa-1.76□□□□□ -2.69
NPM1-206ENST00000519955 ABCA3Q99758 1704 aa-1.76□□□□□ -2.69
NPM1-206ENST00000519955 DEFA5Q01523 94 aa-1.76□□□□□ -2.69
NPM1-206ENST00000519955 MLH3Q9UHC1 1453 aa-1.76□□□□□ -2.69
NPM1-206ENST00000519955 DNAH8Q96JB1 4490 aa-1.76□□□□□ -2.69
NPM1-206ENST00000519955 TRANK1O15050 2925 aa-1.77□□□□□ -2.69
NPM1-206ENST00000519955 MT1HP80294 61 aa-1.77□□□□□ -2.69
NPM1-206ENST00000519955 CCDC168Q8NDH2 2452 aa-1.77□□□□□ -2.69
NPM1-206ENST00000519955 FAM186AA6NE01 2351 aa-1.78□□□□□ -2.69
NPM1-206ENST00000519955 MTORP42345 2549 aa-1.78□□□□□ -2.69
NPM1-206ENST00000519955 FRYQ5TBA9 3013 aa-1.78□□□□□ -2.69
NPM1-206ENST00000519955 SARNPP82979 210 aaKnown RBP-1.78□□□□□ -2.69
NPM1-206ENST00000519955 H0YGG7 62 aa-1.79□□□□□ -2.7
NPM1-206ENST00000519955 GNGT2O14610 69 aa-1.79□□□□□ -2.7
NPM1-206ENST00000519955 ITPR1Q14643 2758 aa-1.79□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms