RNA–Protein interactions for RNA: ENST00000517910.1

AP003356.1-202, humanhuman

TSL 2 BASIC

Gene AP003356.1, Length 2,770 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003356.1-202ENST00000517910 LINC01006Q8NI28 216 aa13.2□□□□□ -0.3
AP003356.1-202ENST00000517910 NCOR2Q9Y618 2525 aa13.2□□□□□ -0.3
AP003356.1-202ENST00000517910 DAD1P61803 113 aa13.2□□□□□ -0.3
AP003356.1-202ENST00000517910 C10orf25Q5T742 122 aa13.2□□□□□ -0.3
AP003356.1-202ENST00000517910 Q6ZTC4 211 aa13.2□□□□□ -0.3
AP003356.1-202ENST00000517910 POLQO75417 2590 aa13.2□□□□□ -0.3
AP003356.1-202ENST00000517910 SETXQ7Z333 2677 aaKnown RBP13.19□□□□□ -0.3
AP003356.1-202ENST00000517910 FN1P02751 2386 aaKnown RBP13.19□□□□□ -0.3
AP003356.1-202ENST00000517910 UNQ6190/PRO20217Q6UXQ8 127 aa13.19□□□□□ -0.3
AP003356.1-202ENST00000517910 OCR1Q9BZK8 76 aa13.19□□□□□ -0.3
AP003356.1-202ENST00000517910 HIGD2AQ9BW72 106 aa13.19□□□□□ -0.3
AP003356.1-202ENST00000517910 DIRC1Q969H9 104 aa13.18□□□□□ -0.3
AP003356.1-202ENST00000517910 IGKV4-1P06312 121 aa13.17□□□□□ -0.3
AP003356.1-202ENST00000517910 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.17□□□□□ -0.3
AP003356.1-202ENST00000517910 CR1P17927 2039 aa13.17□□□□□ -0.3
AP003356.1-202ENST00000517910 IGHV4-31P0DP07 118 aa13.16□□□□□ -0.3
AP003356.1-202ENST00000517910 CHD8Q9HCK8 2581 aa13.16□□□□□ -0.3
AP003356.1-202ENST00000517910 CENPEQ02224 2701 aa13.16□□□□□ -0.3
AP003356.1-202ENST00000517910 ANGP03950 147 aaKnown RBP13.15□□□□□ -0.3
AP003356.1-202ENST00000517910 COX7BP24311 80 aa13.15□□□□□ -0.3
AP003356.1-202ENST00000517910 CSNK1G2-AS1Q8NCQ2 148 aa13.15□□□□□ -0.3
AP003356.1-202ENST00000517910 REG3AQ06141 175 aa13.13□□□□□ -0.31
AP003356.1-202ENST00000517910 LRCOL1A6NCL2 159 aa13.12□□□□□ -0.31
AP003356.1-202ENST00000517910 SPAG11BQ08648 103 aa13.12□□□□□ -0.31
AP003356.1-202ENST00000517910 SONP18583 2426 aaKnown RBP13.11□□□□□ -0.31
AP003356.1-202ENST00000517910 PTPN13Q12923 2485 aa13.11□□□□□ -0.31
AP003356.1-202ENST00000517910 NBEAL2Q6ZNJ1 2754 aa13.11□□□□□ -0.31
AP003356.1-202ENST00000517910 CCL24O00175 119 aa13.11□□□□□ -0.31
AP003356.1-202ENST00000517910 ZNF73O43830 326 aaPredicted RBP13.11□□□□□ -0.31
AP003356.1-202ENST00000517910 EPG5Q9HCE0 2579 aa13.11□□□□□ -0.31
AP003356.1-202ENST00000517910 CYSRT1A8MQ03 144 aa13.1□□□□□ -0.31
AP003356.1-202ENST00000517910 DSCR9P59020 149 aa13.1□□□□□ -0.31
AP003356.1-202ENST00000517910 XAGE1AQ9HD64 81 aa13.1□□□□□ -0.31
AP003356.1-202ENST00000517910 APCP25054 2843 aa13.09□□□□□ -0.31
AP003356.1-202ENST00000517910 FSHBP01225 129 aa13.09□□□□□ -0.31
AP003356.1-202ENST00000517910 ANKRD17O75179 2603 aaKnown RBP13.08□□□□□ -0.32
AP003356.1-202ENST00000517910 NF1P21359 2839 aa13.08□□□□□ -0.32
AP003356.1-202ENST00000517910 ZFYVE26Q68DK2 2539 aa13.07□□□□□ -0.32
AP003356.1-202ENST00000517910 ELOF1P60002 83 aaKnown RBP13.07□□□□□ -0.32
AP003356.1-202ENST00000517910 A0A0J9YWU9 116 aa13.06□□□□□ -0.32
AP003356.1-202ENST00000517910 hDV103S1A0JD37 113 aa13.06□□□□□ -0.32
AP003356.1-202ENST00000517910 IGHV4-30-4P0DP06 118 aa13.06□□□□□ -0.32
AP003356.1-202ENST00000517910 C3orf84H3BNL1 204 aa13.06□□□□□ -0.32
AP003356.1-202ENST00000517910 CMC4P56277 68 aaPredicted RBP13.06□□□□□ -0.32
AP003356.1-202ENST00000517910 PRR15Q8IV56 129 aa13.06□□□□□ -0.32
AP003356.1-202ENST00000517910 FAM30AQ9NZY2 134 aa13.06□□□□□ -0.32
AP003356.1-202ENST00000517910 CELA1Q9UNI1 258 aa13.06□□□□□ -0.32
AP003356.1-202ENST00000517910 PRO0255Q9UI72 69 aa13.05□□□□□ -0.32
AP003356.1-202ENST00000517910 TEX15Q9BXT5 2789 aa13.05□□□□□ -0.32
AP003356.1-202ENST00000517910 PMAIP1Q13794 54 aa13.05□□□□□ -0.32
AP003356.1-202ENST00000517910 KLK12Q9UKR0 248 aa13.05□□□□□ -0.32
AP003356.1-202ENST00000517910 C19orf73Q9NVV2 129 aa13.04□□□□□ -0.32
AP003356.1-202ENST00000517910 HIGD2BQ4VC39 106 aa13.03□□□□□ -0.32
AP003356.1-202ENST00000517910 LINC00612Q8N6U2 182 aa13.03□□□□□ -0.32
AP003356.1-202ENST00000517910 LRRK2Q5S007 2527 aa13.02□□□□□ -0.32
AP003356.1-202ENST00000517910 Q6ZRP5 223 aa13.02□□□□□ -0.32
AP003356.1-202ENST00000517910 SPTBN4Q9H254 2564 aa13.02□□□□□ -0.33
AP003356.1-202ENST00000517910 FLNCQ14315 2725 aa13.02□□□□□ -0.33
AP003356.1-202ENST00000517910 SMIM29Q86T20 159 aa13.01□□□□□ -0.33
AP003356.1-202ENST00000517910 CFAP46Q8IYW2 2715 aa13.01□□□□□ -0.33
AP003356.1-202ENST00000517910 C1orf64Q8NEQ6 169 aa13□□□□□ -0.33
AP003356.1-202ENST00000517910 NAV2Q8IVL1 2488 aa13□□□□□ -0.33
AP003356.1-202ENST00000517910 ESM1Q9NQ30 184 aa12.99□□□□□ -0.33
AP003356.1-202ENST00000517910 Q1T7F1 81 aa12.99□□□□□ -0.33
AP003356.1-202ENST00000517910 PSPHP1O15172 72 aa12.98□□□□□ -0.33
AP003356.1-202ENST00000517910 C6orf48Q9UBA6 75 aa12.98□□□□□ -0.33
AP003356.1-202ENST00000517910 GCN1Q92616 2671 aaKnown RBP12.98□□□□□ -0.33
AP003356.1-202ENST00000517910 Q6ZRU5 148 aa12.98□□□□□ -0.33
AP003356.1-202ENST00000517910 DOPEY1Q5JWR5 2465 aa12.95□□□□□ -0.34
AP003356.1-202ENST00000517910 LINC00528Q8N1L1 170 aa12.95□□□□□ -0.34
AP003356.1-202ENST00000517910 IGLV1-51P01701 117 aa12.93□□□□□ -0.34
AP003356.1-202ENST00000517910 GVQW2A0A096LPI5 108 aaPredicted RBP12.93□□□□□ -0.34
AP003356.1-202ENST00000517910 VPREB1P12018 145 aa12.92□□□□□ -0.34
AP003356.1-202ENST00000517910 DEFB105AQ8NG35 78 aa12.92□□□□□ -0.34
AP003356.1-202ENST00000517910 TRAV22A0A0B4J277 110 aa12.9□□□□□ -0.34
AP003356.1-202ENST00000517910 PRR4Q16378 134 aa12.9□□□□□ -0.34
AP003356.1-202ENST00000517910 LCE6AA0A183 80 aa12.9□□□□□ -0.34
AP003356.1-202ENST00000517910 ZNF469Q96JG9 3925 aaPredicted RBP12.89□□□□□ -0.35
AP003356.1-202ENST00000517910 M0R378 163 aa12.89□□□□□ -0.35
AP003356.1-202ENST00000517910 X6R8D5 127 aa12.87□□□□□ -0.35
AP003356.1-202ENST00000517910 DEFB4AO15263 64 aa12.87□□□□□ -0.35
AP003356.1-202ENST00000517910 PRB2P02812 416 aaPredicted RBP12.86□□□□□ -0.35
AP003356.1-202ENST00000517910 ZCCHC13Q8WW36 166 aaKnown RBP12.86□□□□□ -0.35
AP003356.1-202ENST00000517910 ACACBO00763 2458 aa12.85□□□□□ -0.35
AP003356.1-202ENST00000517910 KPRPQ5T749 579 aaPredicted RBP12.85□□□□□ -0.35
AP003356.1-202ENST00000517910 ETDCA0A1B0GVM5 59 aa12.83□□□□□ -0.36
AP003356.1-202ENST00000517910 ABCA12Q86UK0 2595 aa12.83□□□□□ -0.36
AP003356.1-202ENST00000517910 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.83□□□□□ -0.36
AP003356.1-202ENST00000517910 DNAJC9-AS1A6NH13 148 aa12.83□□□□□ -0.36
AP003356.1-202ENST00000517910 CAMK2N2Q96S95 79 aa12.83□□□□□ -0.36
AP003356.1-202ENST00000517910 Q8N377 158 aa12.82□□□□□ -0.36
AP003356.1-202ENST00000517910 A8MUN3 132 aa12.81□□□□□ -0.36
AP003356.1-202ENST00000517910 PRR34Q9NV39 138 aa12.81□□□□□ -0.36
AP003356.1-202ENST00000517910 FAM208BQ5VWN6 2430 aa12.81□□□□□ -0.36
AP003356.1-202ENST00000517910 MYO18BQ8IUG5 2567 aa12.81□□□□□ -0.36
AP003356.1-202ENST00000517910 IGLV5-48A0A075B6I7 105 aa12.8□□□□□ -0.36
AP003356.1-202ENST00000517910 PSCAO43653 123 aa12.8□□□□□ -0.36
AP003356.1-202ENST00000517910 A0A1W2PNM2 257 aa12.79□□□□□ -0.36
AP003356.1-202ENST00000517910 ST20-AS1Q8NBB2 130 aa12.79□□□□□ -0.36
AP003356.1-202ENST00000517910 LYRM9A8MSI8 78 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms