RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 SNCAP37840 140 aa-2.15□□□□□ -2.75
RNU1-54P-201ENST00000517181 MYOZ3Q8TDC0 251 aa-2.15□□□□□ -2.75
RNU1-54P-201ENST00000517181 ARHGEF5Q12774 1597 aa-2.15□□□□□ -2.75
RNU1-54P-201ENST00000517181 MYOM1P52179 1685 aa-2.15□□□□□ -2.75
RNU1-54P-201ENST00000517181 CHKB-CPT1BH3BT56 60 aa-2.16□□□□□ -2.76
RNU1-54P-201ENST00000517181 C5orf38Q86SI9 138 aa-2.16□□□□□ -2.76
RNU1-54P-201ENST00000517181 MT1MQ8N339 61 aa-2.16□□□□□ -2.76
RNU1-54P-201ENST00000517181 MBD5Q9P267 1494 aa-2.17□□□□□ -2.76
RNU1-54P-201ENST00000517181 MT1BP07438 61 aa-2.17□□□□□ -2.76
RNU1-54P-201ENST00000517181 KRTAP20-1Q3LI63 56 aa-2.17□□□□□ -2.76
RNU1-54P-201ENST00000517181 C12orf73Q69YU5 71 aa-2.17□□□□□ -2.76
RNU1-54P-201ENST00000517181 C6orf201Q7Z4U5 140 aa-2.17□□□□□ -2.76
RNU1-54P-201ENST00000517181 ALKQ9UM73 1620 aa-2.17□□□□□ -2.76
RNU1-54P-201ENST00000517181 SPTY2D1-AS1A0A0U1RR47 76 aa-2.18□□□□□ -2.76
RNU1-54P-201ENST00000517181 A0A1B0GWA3 101 aa-2.18□□□□□ -2.76
RNU1-54P-201ENST00000517181 MT2AP02795 61 aa-2.18□□□□□ -2.76
RNU1-54P-201ENST00000517181 PRLHP81277 87 aa-2.18□□□□□ -2.76
RNU1-54P-201ENST00000517181 LSM10Q969L4 123 aaKnown RBP-2.18□□□□□ -2.76
RNU1-54P-201ENST00000517181 EDC4Q6P2E9 1401 aaKnown RBP-2.18□□□□□ -2.76
RNU1-54P-201ENST00000517181 KIAA1551Q9HCM1 1747 aa-2.19□□□□□ -2.76
RNU1-54P-201ENST00000517181 C9orf153Q5TBE3 101 aa-2.19□□□□□ -2.76
RNU1-54P-201ENST00000517181 TCHHQ07283 1943 aa-2.19□□□□□ -2.76
RNU1-54P-201ENST00000517181 LRRC37AA6NMS7 1700 aa-2.2□□□□□ -2.76
RNU1-54P-201ENST00000517181 ADGRL2O95490 1459 aa-2.2□□□□□ -2.76
RNU1-54P-201ENST00000517181 BOD1L1Q8NFC6 3051 aa-2.2□□□□□ -2.76
RNU1-54P-201ENST00000517181 RGPD2P0DJD1 1756 aa-2.2□□□□□ -2.76
RNU1-54P-201ENST00000517181 RPS25P62851 125 aaKnown RBP-2.2□□□□□ -2.76
RNU1-54P-201ENST00000517181 MGAQ8IWI9 3026 aa-2.2□□□□□ -2.76
RNU1-54P-201ENST00000517181 NDUFA3O95167 84 aa-2.21□□□□□ -2.76
RNU1-54P-201ENST00000517181 COPZ1P61923 177 aa-2.21□□□□□ -2.76
RNU1-54P-201ENST00000517181 SMCO1Q147U7 214 aa-2.21□□□□□ -2.76
RNU1-54P-201ENST00000517181 CLPSL2Q6UWE3 100 aa-2.21□□□□□ -2.76
RNU1-54P-201ENST00000517181 TCEAL4Q96EI5 215 aa-2.21□□□□□ -2.76
RNU1-54P-201ENST00000517181 LINC00846Q9NV44 126 aa-2.21□□□□□ -2.76
RNU1-54P-201ENST00000517181 CCDC167Q9P0B6 97 aa-2.21□□□□□ -2.76
RNU1-54P-201ENST00000517181 CFTRP13569 1480 aa-2.21□□□□□ -2.76
RNU1-54P-201ENST00000517181 SMG6Q86US8 1419 aaKnown RBP-2.22□□□□□ -2.76
RNU1-54P-201ENST00000517181 FAM223BA6NKX1 122 aa-2.22□□□□□ -2.76
RNU1-54P-201ENST00000517181 NMSQ5H8A3 153 aa-2.22□□□□□ -2.76
RNU1-54P-201ENST00000517181 LINC00474Q9P2X8 69 aa-2.22□□□□□ -2.76
RNU1-54P-201ENST00000517181 UQCR10Q9UDW1 63 aa-2.22□□□□□ -2.76
RNU1-54P-201ENST00000517181 SCN7AQ01118 1682 aa-2.22□□□□□ -2.77
RNU1-54P-201ENST00000517181 CSMD2Q7Z408 3487 aa-2.22□□□□□ -2.77
RNU1-54P-201ENST00000517181 NUP188Q5SRE5 1749 aa-2.22□□□□□ -2.77
RNU1-54P-201ENST00000517181 SAA2P0DJI9 122 aaPredicted RBP-2.23□□□□□ -2.77
RNU1-54P-201ENST00000517181 TSTD1Q8NFU3 115 aa-2.23□□□□□ -2.77
RNU1-54P-201ENST00000517181 UBE2D4Q9Y2X8 147 aa-2.23□□□□□ -2.77
RNU1-54P-201ENST00000517181 C4AP0C0L4 1744 aa-2.23□□□□□ -2.77
RNU1-54P-201ENST00000517181 C4BP0C0L5 1744 aa-2.23□□□□□ -2.77
RNU1-54P-201ENST00000517181 GRIN2AQ12879 1464 aa-2.24□□□□□ -2.77
RNU1-54P-201ENST00000517181 A0A0G2JND7 137 aa-2.24□□□□□ -2.77
RNU1-54P-201ENST00000517181 TRBV7-7A0A0K0K1E9 115 aa-2.24□□□□□ -2.77
RNU1-54P-201ENST00000517181 SFTA2Q6UW10 78 aa-2.24□□□□□ -2.77
RNU1-54P-201ENST00000517181 SPANXDQ9BXN6 97 aa-2.24□□□□□ -2.77
RNU1-54P-201ENST00000517181 EHBP1L1Q8N3D4 1523 aa-2.24□□□□□ -2.77
RNU1-54P-201ENST00000517181 SCN11AQ9UI33 1791 aa-2.25□□□□□ -2.77
RNU1-54P-201ENST00000517181 ARMS2P0C7Q2 107 aa-2.25□□□□□ -2.77
RNU1-54P-201ENST00000517181 PDCD10Q9BUL8 212 aa-2.25□□□□□ -2.77
RNU1-54P-201ENST00000517181 PSENENQ9NZ42 101 aa-2.25□□□□□ -2.77
RNU1-54P-201ENST00000517181 SERP1Q9Y6X1 66 aa-2.25□□□□□ -2.77
RNU1-54P-201ENST00000517181 SHROOM2Q13796 1616 aa-2.26□□□□□ -2.77
RNU1-54P-201ENST00000517181 RERGLQ9H628 205 aa-2.26□□□□□ -2.77
RNU1-54P-201ENST00000517181 COX6B2Q6YFQ2 88 aa-2.27□□□□□ -2.77
RNU1-54P-201ENST00000517181 KRTAP8-1Q8IUC2 63 aa-2.27□□□□□ -2.77
RNU1-54P-201ENST00000517181 DEFB107AQ8IZN7 70 aa-2.27□□□□□ -2.77
RNU1-54P-201ENST00000517181 PP6455Q8WZ26 134 aa-2.27□□□□□ -2.77
RNU1-54P-201ENST00000517181 ARL11Q969Q4 196 aa-2.27□□□□□ -2.77
RNU1-54P-201ENST00000517181 SNRNP25Q9BV90 132 aaKnown RBP-2.27□□□□□ -2.77
RNU1-54P-201ENST00000517181 CPSF1Q10570 1443 aaKnown RBP-2.27□□□□□ -2.77
RNU1-54P-201ENST00000517181 MAPKBP1O60336 1514 aa-2.27□□□□□ -2.77
RNU1-54P-201ENST00000517181 H0Y9P7 68 aa-2.28□□□□□ -2.77
RNU1-54P-201ENST00000517181 GNGT1P63211 74 aa-2.28□□□□□ -2.77
RNU1-54P-201ENST00000517181 HSD52Q0P140 79 aa-2.28□□□□□ -2.77
RNU1-54P-201ENST00000517181 COPS9Q8WXC6 57 aa-2.28□□□□□ -2.77
RNU1-54P-201ENST00000517181 CDC42BPGQ6DT37 1551 aa-2.28□□□□□ -2.77
RNU1-54P-201ENST00000517181 CDC42BPAQ5VT25 1732 aa-2.28□□□□□ -2.78
RNU1-54P-201ENST00000517181 H3BQF6 201 aa-2.29□□□□□ -2.78
RNU1-54P-201ENST00000517181 TRAPPC2P0DI81 140 aa-2.29□□□□□ -2.78
RNU1-54P-201ENST00000517181 TRAPPC2BP0DI82 140 aa-2.29□□□□□ -2.78
RNU1-54P-201ENST00000517181 COMMD6Q7Z4G1 85 aa-2.29□□□□□ -2.78
RNU1-54P-201ENST00000517181 PYDC1Q8WXC3 89 aa-2.29□□□□□ -2.78
RNU1-54P-201ENST00000517181 PPP3R2Q96LZ3 170 aa-2.29□□□□□ -2.78
RNU1-54P-201ENST00000517181 CEP152O94986 1710 aa-2.3□□□□□ -2.78
RNU1-54P-201ENST00000517181 CUX1P39880 1505 aa-2.3□□□□□ -2.78
RNU1-54P-201ENST00000517181 ANP32BQ92688 251 aaKnown RBP-2.3□□□□□ -2.78
RNU1-54P-201ENST00000517181 MANBALQ9NQG1 85 aa-2.3□□□□□ -2.78
RNU1-54P-201ENST00000517181 KIF20BQ96Q89 1820 aa-2.31□□□□□ -2.78
RNU1-54P-201ENST00000517181 TARBP1Q13395 1621 aaKnown RBP-2.31□□□□□ -2.78
RNU1-54P-201ENST00000517181 C7orf77A4D0Y5 90 aa-2.31□□□□□ -2.78
RNU1-54P-201ENST00000517181 Q0VG73 95 aa-2.31□□□□□ -2.78
RNU1-54P-201ENST00000517181 Q56UQ5 140 aa-2.31□□□□□ -2.78
RNU1-54P-201ENST00000517181 FREM2Q5SZK8 3169 aa-2.31□□□□□ -2.78
RNU1-54P-201ENST00000517181 PRUNE2Q8WUY3 3088 aa-2.31□□□□□ -2.78
RNU1-54P-201ENST00000517181 A2ML1A8K2U0 1454 aa-2.32□□□□□ -2.78
RNU1-54P-201ENST00000517181 COX6CP09669 75 aa-2.32□□□□□ -2.78
RNU1-54P-201ENST00000517181 SMIM21Q3B7S5 101 aa-2.32□□□□□ -2.78
RNU1-54P-201ENST00000517181 C12orf57Q99622 126 aa-2.32□□□□□ -2.78
RNU1-54P-201ENST00000517181 PREX1Q8TCU6 1659 aa-2.32□□□□□ -2.78
RNU1-54P-201ENST00000517181 MRC2Q9UBG0 1479 aa-2.33□□□□□ -2.78
RNU1-54P-201ENST00000517181 TIAM2Q8IVF5 1701 aa-2.33□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms