RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 H7C2G1 150 aa13.3□□□□□ -0.28
TRIO-223ENST00000515710 RPL13AP40429 203 aaKnown RBP13.3□□□□□ -0.28
TRIO-223ENST00000515710 PRKDCP78527 4128 aaKnown RBP13.3□□□□□ -0.28
TRIO-223ENST00000515710 TRAV13-2A0A0B4J235 113 aa13.29□□□□□ -0.28
TRIO-223ENST00000515710 SLC25A20O43772 301 aa13.29□□□□□ -0.28
TRIO-223ENST00000515710 NDUFV3P56181 108 aaKnown RBP13.28□□□□□ -0.28
TRIO-223ENST00000515710 GAGE2BQ13066 116 aa13.28□□□□□ -0.28
TRIO-223ENST00000515710 GAGE2EQ4V326 116 aa13.28□□□□□ -0.28
TRIO-223ENST00000515710 GAGE2DQ9UEU5 116 aa13.28□□□□□ -0.28
TRIO-223ENST00000515710 MEGF8Q7Z7M0 2845 aa13.28□□□□□ -0.28
TRIO-223ENST00000515710 TTC32Q5I0X7 151 aa13.27□□□□□ -0.28
TRIO-223ENST00000515710 KRTAP1-5Q9BYS1 174 aa13.27□□□□□ -0.28
TRIO-223ENST00000515710 SS18L2Q9UHA2 77 aa13.27□□□□□ -0.28
TRIO-223ENST00000515710 Q6ZRU5 148 aa13.27□□□□□ -0.29
TRIO-223ENST00000515710 USP17L23D6RBM5 183 aa13.26□□□□□ -0.29
TRIO-223ENST00000515710 SNCGO76070 127 aa13.26□□□□□ -0.29
TRIO-223ENST00000515710 IGKV2-28A0A075B6P5 120 aa13.25□□□□□ -0.29
TRIO-223ENST00000515710 NDUFC2O95298 119 aa13.25□□□□□ -0.29
TRIO-223ENST00000515710 IGKV2D-28P01615 120 aa13.25□□□□□ -0.29
TRIO-223ENST00000515710 SYCNQ0VAF6 134 aa13.25□□□□□ -0.29
TRIO-223ENST00000515710 CASC10Q5T4H9 136 aa13.25□□□□□ -0.29
TRIO-223ENST00000515710 NBDYA0A0U1RRE5 68 aa13.23□□□□□ -0.29
TRIO-223ENST00000515710 B5MCH6 92 aa13.23□□□□□ -0.29
TRIO-223ENST00000515710 COX6CP09669 75 aa13.23□□□□□ -0.29
TRIO-223ENST00000515710 LINC00337Q8N6G1 96 aa13.22□□□□□ -0.29
TRIO-223ENST00000515710 TRIAP1O43715 76 aa13.21□□□□□ -0.29
TRIO-223ENST00000515710 ATXN8Q156A1 80 aa13.21□□□□□ -0.29
TRIO-223ENST00000515710 DNAH1Q9P2D7 4330 aa13.21□□□□□ -0.29
TRIO-223ENST00000515710 C9JAW5 83 aa13.21□□□□□ -0.3
TRIO-223ENST00000515710 FAM240AA0A1B0GVK7 77 aa13.2□□□□□ -0.3
TRIO-223ENST00000515710 NDUFC2-KCTD14E9PQ53 114 aa13.2□□□□□ -0.3
TRIO-223ENST00000515710 TRBV10-2A0A0K0K1G8 114 aa13.19□□□□□ -0.3
TRIO-223ENST00000515710 PSCAO43653 123 aa13.19□□□□□ -0.3
TRIO-223ENST00000515710 LINC01620Q4KN68 170 aa13.19□□□□□ -0.3
TRIO-223ENST00000515710 WWC2-AS2Q96NR7 200 aa13.17□□□□□ -0.3
TRIO-223ENST00000515710 RPL28P46779 137 aaKnown RBP13.16□□□□□ -0.3
TRIO-223ENST00000515710 OR13C6PQ8NH95 151 aa13.16□□□□□ -0.3
TRIO-223ENST00000515710 DNAH7Q8WXX0 4024 aa13.16□□□□□ -0.3
TRIO-223ENST00000515710 H3BT86 120 aa13.15□□□□□ -0.3
TRIO-223ENST00000515710 SLPIP03973 132 aa13.15□□□□□ -0.3
TRIO-223ENST00000515710 TLX1NBP0CAT3 122 aa13.15□□□□□ -0.3
TRIO-223ENST00000515710 PLECQ15149 4684 aaKnown RBP13.15□□□□□ -0.3
TRIO-223ENST00000515710 LECT2O14960 151 aa13.15□□□□□ -0.3
TRIO-223ENST00000515710 PRR3P79522 188 aaKnown RBP13.13□□□□□ -0.31
TRIO-223ENST00000515710 XAGE1AQ9HD64 81 aa13.13□□□□□ -0.31
TRIO-223ENST00000515710 CSMD3Q7Z407 3707 aa13.13□□□□□ -0.31
TRIO-223ENST00000515710 CCDC179H3BU77 68 aa13.13□□□□□ -0.31
TRIO-223ENST00000515710 C14orf177Q52M58 125 aa13.13□□□□□ -0.31
TRIO-223ENST00000515710 Q6ZRP5 223 aa13.12□□□□□ -0.31
TRIO-223ENST00000515710 Q8NDZ9 215 aa13.12□□□□□ -0.31
TRIO-223ENST00000515710 SMIM11BQ8TCY0 68 aa13.12□□□□□ -0.31
TRIO-223ENST00000515710 TMEM126AQ9H061 195 aa13.12□□□□□ -0.31
TRIO-223ENST00000515710 TRBV7-7A0A0K0K1E9 115 aa13.11□□□□□ -0.31
TRIO-223ENST00000515710 NCR3O14931 201 aa13.1□□□□□ -0.31
TRIO-223ENST00000515710 IMUPQ9GZP8 106 aa13.09□□□□□ -0.31
TRIO-223ENST00000515710 STARD9Q9P2P6 4700 aa13.08□□□□□ -0.32
TRIO-223ENST00000515710 LST1O00453 97 aa13.07□□□□□ -0.32
TRIO-223ENST00000515710 S100A7L2Q5SY68 101 aa13.07□□□□□ -0.32
TRIO-223ENST00000515710 Q6ZRN7 208 aaPredicted RBP13.07□□□□□ -0.32
TRIO-223ENST00000515710 CLEC2BQ92478 149 aa13.07□□□□□ -0.32
TRIO-223ENST00000515710 CNBPP62633 177 aaKnown RBP13.07□□□□□ -0.32
TRIO-223ENST00000515710 RPL18AQ02543 176 aaKnown RBP13.07□□□□□ -0.32
TRIO-223ENST00000515710 M0R2N4 97 aa13.06□□□□□ -0.32
TRIO-223ENST00000515710 VPREB1P12018 145 aa13.06□□□□□ -0.32
TRIO-223ENST00000515710 FBN3Q75N90 2809 aa13.06□□□□□ -0.32
TRIO-223ENST00000515710 H0YGX0 51 aa13.05□□□□□ -0.32
TRIO-223ENST00000515710 LOC107984640A0A0U1RRK4 108 aa13.05□□□□□ -0.32
TRIO-223ENST00000515710 TEX49A0A1B0GTD5 131 aa13.05□□□□□ -0.32
TRIO-223ENST00000515710 LRCOL1A6NCL2 159 aa13.04□□□□□ -0.32
TRIO-223ENST00000515710 ACYP1P07311 99 aa13.04□□□□□ -0.32
TRIO-223ENST00000515710 C9orf129Q5T035 196 aaKnown RBP13.04□□□□□ -0.32
TRIO-223ENST00000515710 Q6ZR54 194 aa13.04□□□□□ -0.32
TRIO-223ENST00000515710 SMIM20Q8N5G0 67 aa13.04□□□□□ -0.32
TRIO-223ENST00000515710 VPS13DQ5THJ4 4388 aa13.04□□□□□ -0.32
TRIO-223ENST00000515710 IGLV6-57P01721 117 aa13.03□□□□□ -0.32
TRIO-223ENST00000515710 PLA2G2DQ9UNK4 145 aa13.03□□□□□ -0.32
TRIO-223ENST00000515710 C3orf84H3BNL1 204 aa13.03□□□□□ -0.32
TRIO-223ENST00000515710 M0R378 163 aa13.03□□□□□ -0.32
TRIO-223ENST00000515710 LYSTQ99698 3801 aa13.03□□□□□ -0.32
TRIO-223ENST00000515710 LY6G6CO95867 125 aa13□□□□□ -0.33
TRIO-223ENST00000515710 TRACP01848 142 aa13□□□□□ -0.33
TRIO-223ENST00000515710 TRBV10-3A0A0K0K1G6 114 aa12.98□□□□□ -0.33
TRIO-223ENST00000515710 LINC00476Q8WZB0 136 aa12.98□□□□□ -0.33
TRIO-223ENST00000515710 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.97□□□□□ -0.33
TRIO-223ENST00000515710 FAM218AQ96MZ4 157 aa12.97□□□□□ -0.33
TRIO-223ENST00000515710 IGLV5-37A0A075B6J1 123 aa12.96□□□□□ -0.34
TRIO-223ENST00000515710 NKAPP1Q8N9T2 125 aa12.96□□□□□ -0.34
TRIO-223ENST00000515710 PKIGQ9Y2B9 76 aa12.96□□□□□ -0.34
TRIO-223ENST00000515710 C6orf99Q4VX62 202 aa12.95□□□□□ -0.34
TRIO-223ENST00000515710 SERTAD4-AS1Q5TG53 156 aa12.95□□□□□ -0.34
TRIO-223ENST00000515710 TRAV23DV6A0A075B6W5 121 aa12.94□□□□□ -0.34
TRIO-223ENST00000515710 SDIM1Q6ZPB5 146 aa12.94□□□□□ -0.34
TRIO-223ENST00000515710 C16orf90A8MZG2 172 aa12.94□□□□□ -0.34
TRIO-223ENST00000515710 C1orf134Q5TEV5 83 aa12.94□□□□□ -0.34
TRIO-223ENST00000515710 Q8N814 137 aa12.94□□□□□ -0.34
TRIO-223ENST00000515710 C9orf163Q8N9P6 203 aa12.94□□□□□ -0.34
TRIO-223ENST00000515710 A0A1B0GX51 115 aa12.93□□□□□ -0.34
TRIO-223ENST00000515710 A0A087WTM6 91 aa12.92□□□□□ -0.34
TRIO-223ENST00000515710 A0A087WYN8 130 aa12.92□□□□□ -0.34
TRIO-223ENST00000515710 DNAH10Q8IVF4 4471 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms