RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 HIVEP3Q5T1R4 2406 aa1.7□□□□□ -2.14
CALCOCO2-223ENST00000514267 ABCA1O95477 2261 aa1.7□□□□□ -2.14
CALCOCO2-223ENST00000514267 PTPN13Q12923 2485 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 ASH1LQ9NR48 2969 aaKnown RBP1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 MED13LQ71F56 2210 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 IGHV3-64A0A075B6Q5 118 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 IGKV2D-26A0A0A0MRZ7 120 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 MYMXA0A1B0GTQ4 84 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 ZNF815PA8K554 130 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 A8MWV9 139 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 C9JAW5 83 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 J3QKU1 62 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 K7EP13 123 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 K7EP34 96 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 TMEM256-PLSCR3K7ERE1 68 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 K7ERJ3 54 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 M0R2P5 195 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 RPL39P62891 51 aaKnown RBP1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 RHOHQ15669 191 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 RRN3P1Q2M238 152 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 DEFB114Q30KQ6 69 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 WFDC11Q8NEX6 87 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 CARD19Q96LW7 228 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 C20orf166-AS1Q96NR2 134 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 PRADC1Q9BSG0 188 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 CST9LQ9H4G1 147 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 HIGD1BQ9P298 99 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 SPCS1Q9Y6A9 102 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 AKAP6Q13023 2319 aa1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 USP9XQ93008 2570 aaPredicted RBP1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 UTP20O75691 2785 aaKnown RBP1.69□□□□□ -2.14
CALCOCO2-223ENST00000514267 ABCA2Q9BZC7 2435 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 IGSF10Q6WRI0 2623 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 TRBV25-1A0A075B6N4 114 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 A0A096LNT2 108 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 TRGV1A0A0A0MS02 117 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 TRAV2A0A0B4J234 112 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 LOC107984156A0A0G2JMH3 177 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 TRBV6-5A0A0K0K1A5 114 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 A0A1W2PPM0 123 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 C11orf86A6NJI1 115 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 K7ERU9 68 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 M0QY20 66 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 IGKV4-1P06312 121 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 FUSP35637 526 aaKnown RBP eCLIP1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 POLR2KP53803 58 aaKnown RBP1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 FXYD2P54710 66 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 HIST1H4AP62805 103 aaKnown RBP1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 RPS28P62857 69 aaKnown RBP1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 UBE2BP63146 152 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 MIAQ16674 131 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 ARL17AQ8IVW1 177 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 OR5A1Q8NGJ0 315 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 HHLA3Q9XRX5 114 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 NBPF19A0A087WUL8 3843 aa1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 ANKRD17O75179 2603 aaKnown RBP1.68□□□□□ -2.14
CALCOCO2-223ENST00000514267 NAV2Q8IVL1 2488 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 MYO18BQ8IUG5 2567 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 CHD6Q8TD26 2715 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 TRGV2A0A075B6R0 118 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 TRGV4A0A0C4DH28 118 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 TRBV27A0A0K0K1C4 114 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 IGKV2-29A2NJV5 120 aaPredicted RBP1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 IGIPA6NJ69 53 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 H7C2G1 150 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 J3QQQ9 107 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 J3QR89 54 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 P0DMU3 169 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 FAM231AP0DMU4 169 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 FAM231CP0DMU5 169 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 CIRBPQ14011 172 aaKnown RBP1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 LINC01554Q52M75 96 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 OCIAD2Q56VL3 154 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 CFAP126Q5VTH2 177 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 SFTA2Q6UW10 78 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 PRR15Q8IV56 129 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 Q8N2B8 174 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 TIMM21Q9BVV7 248 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 SPTAN1Q13813 2472 aaKnown RBP1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 DOPEY1Q5JWR5 2465 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 FLNCQ14315 2725 aa1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 MAP1AP78559 2803 aaPredicted RBP1.67□□□□□ -2.14
CALCOCO2-223ENST00000514267 FAM208BQ5VWN6 2430 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 CFAP46Q8IYW2 2715 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 TRBV7-3A0A075B6L6 115 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 IGKV3OR2-268A0A0C4DH90 116 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 LOC107984640A0A0U1RRK4 108 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 F8W1H4 67 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 M0R378 163 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 SPINK8P0C7L1 97 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 NPC2P61916 151 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 MEIG1Q5JSS6 88 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 Q6ZTI0 123 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 C10orf126Q8N4M7 172 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 TMEM263Q8WUH6 116 aaKnown RBP1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 BRK1Q8WUW1 75 aa1.66□□□□□ -2.14
CALCOCO2-223ENST00000514267 LINC00467Q9BRT7 94 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms