RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 ADAMTSL4-AS1Q5T5F5 129 aa11.13□□□□□ -0.63
HMGCL-209ENST00000513148 C1orf134Q5TEV5 83 aa11.13□□□□□ -0.63
HMGCL-209ENST00000513148 LOC107984640A0A0U1RRK4 108 aa11.13□□□□□ -0.63
HMGCL-209ENST00000513148 SMCR5Q8TEV8 140 aa11.13□□□□□ -0.63
HMGCL-209ENST00000513148 TRAV8-3A0A0A6YYJ7 113 aa11.12□□□□□ -0.63
HMGCL-209ENST00000513148 TINCRA0A1B0GVN0 87 aa11.12□□□□□ -0.63
HMGCL-209ENST00000513148 C6orf223Q8N319 242 aa11.12□□□□□ -0.63
HMGCL-209ENST00000513148 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
HMGCL-209ENST00000513148 DNAH2Q9P225 4427 aa11.11□□□□□ -0.63
HMGCL-209ENST00000513148 UBE2L6O14933 153 aa11.09□□□□□ -0.63
HMGCL-209ENST00000513148 RTL8CO15255 209 aa11.09□□□□□ -0.63
HMGCL-209ENST00000513148 OPRPNQ99935 248 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-209ENST00000513148 Q9HAA7 133 aa11.09□□□□□ -0.63
HMGCL-209ENST00000513148 KLK12Q9UKR0 248 aa11.09□□□□□ -0.63
HMGCL-209ENST00000513148 IGHV3-64A0A075B6Q5 118 aa11.08□□□□□ -0.64
HMGCL-209ENST00000513148 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.08□□□□□ -0.64
HMGCL-209ENST00000513148 IGKV2-29A2NJV5 120 aaPredicted RBP11.08□□□□□ -0.64
HMGCL-209ENST00000513148 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
HMGCL-209ENST00000513148 FRAS1Q86XX4 4008 aa11.08□□□□□ -0.64
HMGCL-209ENST00000513148 IBA57-AS1B1ANH7 110 aa11.07□□□□□ -0.64
HMGCL-209ENST00000513148 ANGP03950 147 aaKnown RBP11.07□□□□□ -0.64
HMGCL-209ENST00000513148 CHCHD7Q9BUK0 85 aa11.07□□□□□ -0.64
HMGCL-209ENST00000513148 NDUFA1O15239 70 aa11.06□□□□□ -0.64
HMGCL-209ENST00000513148 RPL18AQ02543 176 aaKnown RBP11.06□□□□□ -0.64
HMGCL-209ENST00000513148 DPH3Q96FX2 82 aa11.06□□□□□ -0.64
HMGCL-209ENST00000513148 FAM104AQ969W3 186 aa11.06□□□□□ -0.64
HMGCL-209ENST00000513148 CLPSL2Q6UWE3 100 aa11.05□□□□□ -0.64
HMGCL-209ENST00000513148 DNAH10Q8IVF4 4471 aa11.05□□□□□ -0.64
HMGCL-209ENST00000513148 BAALC-AS2P0C853 105 aa11.04□□□□□ -0.64
HMGCL-209ENST00000513148 SERP2Q8N6R1 65 aa11.04□□□□□ -0.64
HMGCL-209ENST00000513148 IGLV4-60A0A075B6I1 120 aa11.04□□□□□ -0.64
HMGCL-209ENST00000513148 IGLV5-45A0A087WSX0 123 aa11.03□□□□□ -0.64
HMGCL-209ENST00000513148 CRPP02741 224 aa11.02□□□□□ -0.64
HMGCL-209ENST00000513148 Q6ZRN7 208 aaPredicted RBP11.02□□□□□ -0.64
HMGCL-209ENST00000513148 LINC00269Q8N2A0 174 aa11.02□□□□□ -0.64
HMGCL-209ENST00000513148 TNP2Q05952 138 aa11.02□□□□□ -0.65
HMGCL-209ENST00000513148 Q6JHZ5 121 aa11.02□□□□□ -0.65
HMGCL-209ENST00000513148 LINC00336Q6ZUF6 198 aa11.02□□□□□ -0.65
HMGCL-209ENST00000513148 LINC00308Q8TCZ7 52 aa11.02□□□□□ -0.65
HMGCL-209ENST00000513148 NDUFC2-KCTD14E9PQ53 114 aa11.01□□□□□ -0.65
HMGCL-209ENST00000513148 C22orf24Q9Y442 160 aa11.01□□□□□ -0.65
HMGCL-209ENST00000513148 A0A1B0GUV1 79 aa11.01□□□□□ -0.65
HMGCL-209ENST00000513148 hADV29S1A0JD25 119 aa11.01□□□□□ -0.65
HMGCL-209ENST00000513148 ENHOQ6UWT2 76 aa11.01□□□□□ -0.65
HMGCL-209ENST00000513148 PSCAO43653 123 aa11□□□□□ -0.65
HMGCL-209ENST00000513148 IGKV2D-24A0A075B6R9 120 aa10.99□□□□□ -0.65
HMGCL-209ENST00000513148 IGKV3OR2-268A0A0C4DH90 116 aa10.99□□□□□ -0.65
HMGCL-209ENST00000513148 REG3AQ06141 175 aa10.98□□□□□ -0.65
HMGCL-209ENST00000513148 FAT2Q9NYQ8 4349 aa10.98□□□□□ -0.65
HMGCL-209ENST00000513148 OBSCN-AS1Q96MR7 158 aa10.97□□□□□ -0.65
HMGCL-209ENST00000513148 IGLV5-39A0A0G2JS06 123 aa10.97□□□□□ -0.65
HMGCL-209ENST00000513148 MALP21145 153 aa10.97□□□□□ -0.65
HMGCL-209ENST00000513148 PRR34Q9NV39 138 aa10.97□□□□□ -0.65
HMGCL-209ENST00000513148 DNAH17Q9UFH2 4485 aa10.96□□□□□ -0.65
HMGCL-209ENST00000513148 IGLV10-54A0A075B6I4 117 aa10.96□□□□□ -0.65
HMGCL-209ENST00000513148 DGAT2L7PQ6IED9 249 aa10.96□□□□□ -0.65
HMGCL-209ENST00000513148 FAM19A3Q7Z5A8 133 aa10.96□□□□□ -0.65
HMGCL-209ENST00000513148 C1orf43Q9BWL3 253 aa10.96□□□□□ -0.65
HMGCL-209ENST00000513148 UBE2D4Q9Y2X8 147 aa10.96□□□□□ -0.65
HMGCL-209ENST00000513148 RMI2Q96E14 147 aa10.96□□□□□ -0.66
HMGCL-209ENST00000513148 RPL28P46779 137 aaKnown RBP10.95□□□□□ -0.66
HMGCL-209ENST00000513148 RNASE13Q5GAN3 156 aaKnown RBP10.95□□□□□ -0.66
HMGCL-209ENST00000513148 NDUFC2O95298 119 aa10.94□□□□□ -0.66
HMGCL-209ENST00000513148 NPC2P61916 151 aa10.94□□□□□ -0.66
HMGCL-209ENST00000513148 EPPK1P58107 5090 aaKnown RBP10.93□□□□□ -0.66
HMGCL-209ENST00000513148 TRAV13-2A0A0B4J235 113 aa10.93□□□□□ -0.66
HMGCL-209ENST00000513148 LECT2O14960 151 aa10.92□□□□□ -0.66
HMGCL-209ENST00000513148 DNAL4O96015 105 aa10.92□□□□□ -0.66
HMGCL-209ENST00000513148 CDC42SE2Q9NRR3 84 aa10.92□□□□□ -0.66
HMGCL-209ENST00000513148 TRAV13-1A0A0B4J241 112 aa10.92□□□□□ -0.66
HMGCL-209ENST00000513148 Q5XG85 94 aa10.92□□□□□ -0.66
HMGCL-209ENST00000513148 A0A087WTM6 91 aa10.91□□□□□ -0.66
HMGCL-209ENST00000513148 A0A1B0GVY2 172 aa10.91□□□□□ -0.66
HMGCL-209ENST00000513148 HECTD4Q9Y4D8 3996 aa10.9□□□□□ -0.66
HMGCL-209ENST00000513148 H0YGX0 51 aa10.9□□□□□ -0.66
HMGCL-209ENST00000513148 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
HMGCL-209ENST00000513148 PKD1P98161 4303 aa10.9□□□□□ -0.66
HMGCL-209ENST00000513148 LRCOL1A6NCL2 159 aa10.89□□□□□ -0.67
HMGCL-209ENST00000513148 USP17L23D6RBM5 183 aa10.89□□□□□ -0.67
HMGCL-209ENST00000513148 S100A7L2Q5SY68 101 aa10.89□□□□□ -0.67
HMGCL-209ENST00000513148 ATP5EP2Q5VTU8 51 aa10.89□□□□□ -0.67
HMGCL-209ENST00000513148 CYSTM1Q9H1C7 97 aa10.89□□□□□ -0.67
HMGCL-209ENST00000513148 BCE1O60756 84 aa10.89□□□□□ -0.67
HMGCL-209ENST00000513148 FAM218AQ96MZ4 157 aa10.89□□□□□ -0.67
HMGCL-209ENST00000513148 FUSP35637 526 aaKnown RBP eCLIP10.88□□□□□ -0.67
HMGCL-209ENST00000513148 SOSTDC1Q6X4U4 206 aa10.88□□□□□ -0.67
HMGCL-209ENST00000513148 LINC00959A0A1B0GUT2 108 aa10.87□□□□□ -0.67
HMGCL-209ENST00000513148 EPM2AB3EWF7 344 aa10.87□□□□□ -0.67
HMGCL-209ENST00000513148 KRTAP26-1Q6PEX3 210 aa10.87□□□□□ -0.67
HMGCL-209ENST00000513148 LINC01561Q8N1V8 128 aa10.87□□□□□ -0.67
HMGCL-209ENST00000513148 CHCHD10Q8WYQ3 142 aaPredicted RBP10.87□□□□□ -0.67
HMGCL-209ENST00000513148 ZNF625Q96I27 306 aaPredicted RBP10.87□□□□□ -0.67
HMGCL-209ENST00000513148 OXTP01178 125 aa10.87□□□□□ -0.67
HMGCL-209ENST00000513148 XCL1P47992 114 aa10.87□□□□□ -0.67
HMGCL-209ENST00000513148 KRTAP10-2P60368 255 aa10.86□□□□□ -0.67
HMGCL-209ENST00000513148 TRBV10-3A0A0K0K1G6 114 aa10.85□□□□□ -0.67
HMGCL-209ENST00000513148 SS18Q15532 418 aa10.85□□□□□ -0.67
HMGCL-209ENST00000513148 C4orf26Q17RF5 130 aa10.85□□□□□ -0.67
HMGCL-209ENST00000513148 Q8N814 137 aa10.84□□□□□ -0.67
HMGCL-209ENST00000513148 DSCR8Q96T75 97 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms